RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 ZNRF2Q8NHG8 242 aa6.55□□□□□ -1.36
COL17A1-207ENST00000488320 TMEM203Q969S6 136 aa6.55□□□□□ -1.36
COL17A1-207ENST00000488320 PINX1Q96BK5 328 aaKnown RBP6.55□□□□□ -1.36
COL17A1-207ENST00000488320 NEU1Q99519 415 aa6.55□□□□□ -1.36
COL17A1-207ENST00000488320 PUS1Q9Y606 427 aaKnown RBP eCLIP6.55□□□□□ -1.36
COL17A1-207ENST00000488320 RPS10-NUDT3A0A1W2PQS6 291 aa6.54□□□□□ -1.36
COL17A1-207ENST00000488320 RBFOX2O43251 390 aaKnown RBP eCLIP6.54□□□□□ -1.36
COL17A1-207ENST00000488320 NUDT3O95989 172 aa6.54□□□□□ -1.36
COL17A1-207ENST00000488320 MT-CO2P00403 227 aa6.54□□□□□ -1.36
COL17A1-207ENST00000488320 CCL18P55774 89 aa6.54□□□□□ -1.36
COL17A1-207ENST00000488320 DAD1P61803 113 aa6.54□□□□□ -1.36
COL17A1-207ENST00000488320 DLK1P80370 383 aa6.54□□□□□ -1.36
COL17A1-207ENST00000488320 DHRS2Q13268 280 aa6.54□□□□□ -1.36
COL17A1-207ENST00000488320 POU2AF1Q16633 256 aa6.54□□□□□ -1.36
COL17A1-207ENST00000488320 CDNFQ49AH0 187 aa6.54□□□□□ -1.36
COL17A1-207ENST00000488320 ZFP1Q6P2D0 407 aa6.54□□□□□ -1.36
COL17A1-207ENST00000488320 ZNF600Q6ZNG1 722 aa6.54□□□□□ -1.36
COL17A1-207ENST00000488320 AHSA2Q719I0 299 aa6.54□□□□□ -1.36
COL17A1-207ENST00000488320 ZBTB34Q8NCN2 500 aa6.54□□□□□ -1.36
COL17A1-207ENST00000488320 OR1P1Q8NH06 330 aa6.54□□□□□ -1.36
COL17A1-207ENST00000488320 CYGBQ8WWM9 190 aa6.54□□□□□ -1.36
COL17A1-207ENST00000488320 NARS2Q96I59 477 aaKnown RBP6.54□□□□□ -1.36
COL17A1-207ENST00000488320 ELF5Q9UKW6 265 aaPredicted RBP6.54□□□□□ -1.36
COL17A1-207ENST00000488320 NSG2Q9Y328 171 aa6.54□□□□□ -1.36
COL17A1-207ENST00000488320 V9GY05 133 aa6.54□□□□□ -1.36
COL17A1-207ENST00000488320 HELTA6NFD8 242 aa6.53□□□□□ -1.36
COL17A1-207ENST00000488320 I3L2K1 104 aa6.53□□□□□ -1.36
COL17A1-207ENST00000488320 ARL6IP5O75915 188 aa6.53□□□□□ -1.36
COL17A1-207ENST00000488320 FGF2P09038 288 aa6.53□□□□□ -1.36
COL17A1-207ENST00000488320 NPBWR1P48145 328 aa6.53□□□□□ -1.36
COL17A1-207ENST00000488320 EIF2B2P49770 351 aaKnown RBP6.53□□□□□ -1.36
COL17A1-207ENST00000488320 FXYD7P58549 80 aa6.53□□□□□ -1.36
COL17A1-207ENST00000488320 ARL6IP1Q15041 203 aa6.53□□□□□ -1.36
COL17A1-207ENST00000488320 OXA1LQ15070 435 aa6.53□□□□□ -1.36
COL17A1-207ENST00000488320 OR51H1Q8NH63 302 aa6.53□□□□□ -1.36
COL17A1-207ENST00000488320 METTL26Q96S19 204 aa6.53□□□□□ -1.36
COL17A1-207ENST00000488320 MND1Q9BWT6 205 aa6.53□□□□□ -1.36
COL17A1-207ENST00000488320 ATG5Q9H1Y0 275 aa6.53□□□□□ -1.36
COL17A1-207ENST00000488320 MDFICQ9P1T7 246 aa6.53□□□□□ -1.36
COL17A1-207ENST00000488320 SRRM2Q9UQ35 2752 aaKnown RBP6.53□□□□□ -1.36
COL17A1-207ENST00000488320 ATP5HO75947 161 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 IGKV3-20P01619 116 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 SMR3BP02814 79 aaPredicted RBP6.52□□□□□ -1.37
COL17A1-207ENST00000488320 CALRP27797 417 aaKnown RBP6.52□□□□□ -1.37
COL17A1-207ENST00000488320 FCGR2CP31995 323 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 P2RY1P47900 373 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 XGP55808 180 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 ARPC4P59998 168 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 SNRPD3P62318 126 aaKnown RBP6.52□□□□□ -1.37
COL17A1-207ENST00000488320 CLINT1Q14677 625 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 KCTD21Q4G0X4 260 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 AADACL3Q5VUY0 350 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 ZNF705AQ6ZN79 300 aaPredicted RBP6.52□□□□□ -1.37
COL17A1-207ENST00000488320 BPIFB6Q8NFQ5 453 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 TSPAN14Q8NG11 270 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 DCANP1Q8TF63 244 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 UFD1Q92890 307 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 TMEM230Q96A57 120 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 SLC5A7Q9GZV3 580 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 ZFAND3Q9H8U3 227 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 PLEKHA2Q9HB19 425 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 FKBP11Q9NYL4 201 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 COMMD9Q9P000 198 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 ANXA10Q9UJ72 324 aa6.52□□□□□ -1.37
COL17A1-207ENST00000488320 FLG2Q5D862 2391 aaPredicted RBP6.51□□□□□ -1.37
COL17A1-207ENST00000488320 MARCH11A6NNE9 402 aa6.51□□□□□ -1.37
COL17A1-207ENST00000488320 ZNF705FA8MVS1 300 aaPredicted RBP6.51□□□□□ -1.37
COL17A1-207ENST00000488320 H3BMM0 161 aa6.51□□□□□ -1.37
COL17A1-207ENST00000488320 FAM229AH3BQW9 127 aa6.51□□□□□ -1.37
COL17A1-207ENST00000488320 KRASP01116 189 aa6.51□□□□□ -1.37
COL17A1-207ENST00000488320 ZNF705DP0CH99 300 aaPredicted RBP6.51□□□□□ -1.37
COL17A1-207ENST00000488320 ZNF705BP0CI00 300 aaPredicted RBP6.51□□□□□ -1.37
COL17A1-207ENST00000488320 RAB6AP20340 208 aa6.51□□□□□ -1.37
COL17A1-207ENST00000488320 GNRHRP30968 328 aa6.51□□□□□ -1.37
COL17A1-207ENST00000488320 FXYD4P59646 89 aa6.51□□□□□ -1.37
COL17A1-207ENST00000488320 SPHARQ15513 63 aa6.51□□□□□ -1.37
COL17A1-207ENST00000488320 MSMO1Q15800 293 aa6.51□□□□□ -1.37
COL17A1-207ENST00000488320 TMEM91Q6ZNR0 172 aa6.51□□□□□ -1.37
COL17A1-207ENST00000488320 OR13F1Q8NGS4 319 aa6.51□□□□□ -1.37
COL17A1-207ENST00000488320 C7orf50Q9BRJ6 194 aaKnown RBP6.51□□□□□ -1.37
COL17A1-207ENST00000488320 CCDC90BQ9GZT6 254 aa6.51□□□□□ -1.37
COL17A1-207ENST00000488320 Q9H8V8 135 aa6.51□□□□□ -1.37
COL17A1-207ENST00000488320 PSORS1C1Q9UIG5 152 aa6.51□□□□□ -1.37
COL17A1-207ENST00000488320 PRNDQ9UKY0 176 aa6.51□□□□□ -1.37
COL17A1-207ENST00000488320 LINC00588Q9Y4M8 146 aa6.51□□□□□ -1.37
COL17A1-207ENST00000488320 YTHDF2Q9Y5A9 579 aaKnown RBP6.51□□□□□ -1.37
COL17A1-207ENST00000488320 A0A1B0GU03 582 aa6.5□□□□□ -1.37
COL17A1-207ENST00000488320 LOC102723971A0A1B0GUV8 181 aa6.5□□□□□ -1.37
COL17A1-207ENST00000488320 F5H768 121 aa6.5□□□□□ -1.37
COL17A1-207ENST00000488320 PDCD5O14737 125 aa6.5□□□□□ -1.37
COL17A1-207ENST00000488320 EREGO14944 169 aa6.5□□□□□ -1.37
COL17A1-207ENST00000488320 TMEM50AO95807 157 aa6.5□□□□□ -1.37
COL17A1-207ENST00000488320 HBE1P02100 147 aa6.5□□□□□ -1.37
COL17A1-207ENST00000488320 HSMCR30P0CW71 290 aa6.5□□□□□ -1.37
COL17A1-207ENST00000488320 BTF3P20290 206 aaKnown RBP6.5□□□□□ -1.37
COL17A1-207ENST00000488320 LPAR6P43657 344 aa6.5□□□□□ -1.37
COL17A1-207ENST00000488320 PPP5CP53041 499 aa6.5□□□□□ -1.37
COL17A1-207ENST00000488320 AP2S1P53680 142 aaPredicted RBP6.5□□□□□ -1.37
COL17A1-207ENST00000488320 GNG2P59768 71 aa6.5□□□□□ -1.37
COL17A1-207ENST00000488320 ERHP84090 104 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms