RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 C15orf61A6NNL5 157 aa11.31□□□□□ -0.6
TRIM50-203ENST00000488217 FCGR2BP31994 310 aaPredicted RBP11.31□□□□□ -0.6
TRIM50-203ENST00000488217 HSPE1P61604 102 aaKnown RBP11.31□□□□□ -0.6
TRIM50-203ENST00000488217 H2BFWTQ7Z2G1 175 aa11.31□□□□□ -0.6
TRIM50-203ENST00000488217 TBC1D26Q86UD7 250 aa11.31□□□□□ -0.6
TRIM50-203ENST00000488217 APRG1Q8IVJ8 170 aa11.31□□□□□ -0.6
TRIM50-203ENST00000488217 AP3S1Q92572 193 aa11.31□□□□□ -0.6
TRIM50-203ENST00000488217 MISP3Q96FF7 219 aa11.31□□□□□ -0.6
TRIM50-203ENST00000488217 SEC22AQ96IW7 307 aa11.31□□□□□ -0.6
TRIM50-203ENST00000488217 OR10C1Q96KK4 312 aa11.31□□□□□ -0.6
TRIM50-203ENST00000488217 SLIRPQ9GZT3 109 aaKnown RBP11.31□□□□□ -0.6
TRIM50-203ENST00000488217 FXYD6Q9H0Q3 95 aa11.31□□□□□ -0.6
TRIM50-203ENST00000488217 CSTL1Q9H114 145 aa11.31□□□□□ -0.6
TRIM50-203ENST00000488217 KLK5Q9Y337 293 aaPredicted RBP11.31□□□□□ -0.6
TRIM50-203ENST00000488217 UCP3P55916 312 aa11.3□□□□□ -0.6
TRIM50-203ENST00000488217 ERHP84090 104 aaKnown RBP11.3□□□□□ -0.6
TRIM50-203ENST00000488217 MZT2AQ6P582 158 aa11.3□□□□□ -0.6
TRIM50-203ENST00000488217 ZNF414Q96IQ9 312 aa11.3□□□□□ -0.6
TRIM50-203ENST00000488217 CMTM3Q96MX0 182 aa11.3□□□□□ -0.6
TRIM50-203ENST00000488217 NXF2Q9GZY0 626 aaKnown RBP11.3□□□□□ -0.6
TRIM50-203ENST00000488217 KMT2AQ03164 3969 aa11.29□□□□□ -0.6
TRIM50-203ENST00000488217 IGHV3-49A0A0A0MS15 119 aa11.29□□□□□ -0.6
TRIM50-203ENST00000488217 MT-CO2P00403 227 aa11.29□□□□□ -0.6
TRIM50-203ENST00000488217 IGKV1-39P01597 117 aa11.29□□□□□ -0.6
TRIM50-203ENST00000488217 APOA1P02647 267 aa11.29□□□□□ -0.6
TRIM50-203ENST00000488217 IGKV1D-39P04432 117 aa11.29□□□□□ -0.6
TRIM50-203ENST00000488217 EIF4EP06730 217 aaKnown RBP11.29□□□□□ -0.6
TRIM50-203ENST00000488217 TFPI2P48307 235 aa11.29□□□□□ -0.6
TRIM50-203ENST00000488217 FAM90A2PQ658T7 463 aa11.29□□□□□ -0.6
TRIM50-203ENST00000488217 ZNF114Q8NC26 417 aa11.29□□□□□ -0.6
TRIM50-203ENST00000488217 SCPEP1Q9HB40 452 aa11.29□□□□□ -0.6
TRIM50-203ENST00000488217 MPTX1A8MV57 137 aa11.28□□□□□ -0.6
TRIM50-203ENST00000488217 HPGDSO60760 199 aa11.28□□□□□ -0.6
TRIM50-203ENST00000488217 IGHV3-48P01763 117 aa11.28□□□□□ -0.6
TRIM50-203ENST00000488217 CD5P06127 495 aa11.28□□□□□ -0.6
TRIM50-203ENST00000488217 PAFAH1B2P68402 229 aa11.28□□□□□ -0.6
TRIM50-203ENST00000488217 PRCDQ00LT1 54 aa11.28□□□□□ -0.6
TRIM50-203ENST00000488217 ZNF124Q15973 351 aa11.28□□□□□ -0.6
TRIM50-203ENST00000488217 PINX1Q96BK5 328 aaKnown RBP11.28□□□□□ -0.6
TRIM50-203ENST00000488217 IGKV3-7A0A075B6H7 116 aa11.27□□□□□ -0.61
TRIM50-203ENST00000488217 IGHV3OR16-13A0A075B7E8 117 aa11.27□□□□□ -0.61
TRIM50-203ENST00000488217 IGHV3-74A0A0B4J1X5 117 aa11.27□□□□□ -0.61
TRIM50-203ENST00000488217 CTDSP2O14595 271 aa11.27□□□□□ -0.61
TRIM50-203ENST00000488217 GNG7O60262 68 aa11.27□□□□□ -0.61
TRIM50-203ENST00000488217 ELK1P19419 428 aa11.27□□□□□ -0.61
TRIM50-203ENST00000488217 TOMM20LQ6UXN7 152 aa11.27□□□□□ -0.61
TRIM50-203ENST00000488217 SNX29P2Q8IUI4 249 aa11.27□□□□□ -0.61
TRIM50-203ENST00000488217 GBGT1Q8N5D6 347 aa11.27□□□□□ -0.61
TRIM50-203ENST00000488217 DUSP18Q8NEJ0 188 aa11.27□□□□□ -0.61
TRIM50-203ENST00000488217 MCFD2Q8NI22 146 aa11.27□□□□□ -0.61
TRIM50-203ENST00000488217 GATAD1Q8WUU5 269 aa11.27□□□□□ -0.61
TRIM50-203ENST00000488217 PHLDA1Q8WV24 401 aaPredicted RBP11.27□□□□□ -0.61
TRIM50-203ENST00000488217 RARRES2Q99969 163 aa11.27□□□□□ -0.61
TRIM50-203ENST00000488217 MIXL1Q9H2W2 232 aa11.27□□□□□ -0.61
TRIM50-203ENST00000488217 RGS5O15539 181 aa11.26□□□□□ -0.61
TRIM50-203ENST00000488217 RCVRNP35243 200 aa11.26□□□□□ -0.61
TRIM50-203ENST00000488217 SNCAP37840 140 aa11.26□□□□□ -0.61
TRIM50-203ENST00000488217 NPBWR1P48145 328 aa11.26□□□□□ -0.61
TRIM50-203ENST00000488217 TCF24Q7RTU0 167 aa11.26□□□□□ -0.61
TRIM50-203ENST00000488217 LILRB2Q8N423 598 aa11.26□□□□□ -0.61
TRIM50-203ENST00000488217 MRGPRFQ96AM1 343 aa11.26□□□□□ -0.61
TRIM50-203ENST00000488217 DNAH10Q8IVF4 4471 aa11.25□□□□□ -0.61
TRIM50-203ENST00000488217 A0A0B4J293 547 aa11.25□□□□□ -0.61
TRIM50-203ENST00000488217 FAM25AB3EWG3 89 aa11.25□□□□□ -0.61
TRIM50-203ENST00000488217 FAM25CB3EWG5 89 aa11.25□□□□□ -0.61
TRIM50-203ENST00000488217 FAM25GB3EWG6 89 aa11.25□□□□□ -0.61
TRIM50-203ENST00000488217 TMEM50AO95807 157 aa11.25□□□□□ -0.61
TRIM50-203ENST00000488217 GINS3Q9BRX5 216 aa11.25□□□□□ -0.61
TRIM50-203ENST00000488217 M0QYG6 137 aa11.24□□□□□ -0.61
TRIM50-203ENST00000488217 DNASE2O00115 360 aaPredicted RBP11.24□□□□□ -0.61
TRIM50-203ENST00000488217 APOHP02749 345 aaPredicted RBP11.24□□□□□ -0.61
TRIM50-203ENST00000488217 RPL11P62913 178 aaKnown RBP11.24□□□□□ -0.61
TRIM50-203ENST00000488217 IZUMO4Q1ZYL8 232 aa11.24□□□□□ -0.61
TRIM50-203ENST00000488217 CNPY1Q3B7I2 92 aa11.24□□□□□ -0.61
TRIM50-203ENST00000488217 OR11H2Q8NH07 326 aa11.24□□□□□ -0.61
TRIM50-203ENST00000488217 MS4A6AQ9H2W1 248 aa11.24□□□□□ -0.61
TRIM50-203ENST00000488217 VSIRQ9H7M9 311 aa11.24□□□□□ -0.61
TRIM50-203ENST00000488217 FRAS1Q86XX4 4008 aa11.23□□□□□ -0.61
TRIM50-203ENST00000488217 INS-IGF2F8WCM5 200 aa11.23□□□□□ -0.61
TRIM50-203ENST00000488217 ST8SIA3O43173 380 aa11.23□□□□□ -0.61
TRIM50-203ENST00000488217 DFFBO76075 338 aa11.23□□□□□ -0.61
TRIM50-203ENST00000488217 IFNA17P01571 189 aa11.23□□□□□ -0.61
TRIM50-203ENST00000488217 PGAM2P15259 253 aa11.23□□□□□ -0.61
TRIM50-203ENST00000488217 ETV6P41212 452 aa11.23□□□□□ -0.61
TRIM50-203ENST00000488217 SUB1P53999 127 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRIM50-203ENST00000488217 RND3P61587 244 aa11.23□□□□□ -0.61
TRIM50-203ENST00000488217 SPINK9Q5DT21 86 aa11.23□□□□□ -0.61
TRIM50-203ENST00000488217 LGALS9CQ6DKI2 356 aa11.23□□□□□ -0.61
TRIM50-203ENST00000488217 PVRIGQ6DKI7 326 aa11.23□□□□□ -0.61
TRIM50-203ENST00000488217 ZNF600Q6ZNG1 722 aa11.23□□□□□ -0.61
TRIM50-203ENST00000488217 C11orf45Q8TAV5 145 aa11.23□□□□□ -0.61
TRIM50-203ENST00000488217 ST8SIA2Q92186 375 aa11.23□□□□□ -0.61
TRIM50-203ENST00000488217 ZNF486Q96H40 463 aaPredicted RBP11.23□□□□□ -0.61
TRIM50-203ENST00000488217 EXTL2Q9UBQ6 330 aa11.23□□□□□ -0.61
TRIM50-203ENST00000488217 KLK11Q9UBX7 282 aa11.23□□□□□ -0.61
TRIM50-203ENST00000488217 IGHV3-66A0A0C4DH42 116 aa11.22□□□□□ -0.61
TRIM50-203ENST00000488217 ATG12O94817 140 aa11.22□□□□□ -0.61
TRIM50-203ENST00000488217 IGKV1-5P01602 117 aa11.22□□□□□ -0.61
TRIM50-203ENST00000488217 IFNA4P05014 189 aa11.22□□□□□ -0.61
TRIM50-203ENST00000488217 PI3P19957 117 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms