RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 COQ8AQ8NI60 647 aa13.14□□□□□ -0.31
SHROOM1-205ENST00000488072 ZNF502Q8TBZ5 544 aa13.14□□□□□ -0.31
SHROOM1-205ENST00000488072 ZNF431Q8TF32 576 aaPredicted RBP13.14□□□□□ -0.31
SHROOM1-205ENST00000488072 SCARB1Q8WTV0 552 aa13.14□□□□□ -0.31
SHROOM1-205ENST00000488072 PINX1Q96BK5 328 aaKnown RBP13.14□□□□□ -0.31
SHROOM1-205ENST00000488072 ZNF414Q96IQ9 312 aa13.14□□□□□ -0.31
SHROOM1-205ENST00000488072 HSPB7Q9UBY9 170 aa13.14□□□□□ -0.31
SHROOM1-205ENST00000488072 INMT-MINDY4F8WBC2 141 aa13.13□□□□□ -0.31
SHROOM1-205ENST00000488072 DHFRP00374 187 aa13.13□□□□□ -0.31
SHROOM1-205ENST00000488072 MT-CO2P00403 227 aa13.13□□□□□ -0.31
SHROOM1-205ENST00000488072 CLEC3BP05452 202 aa13.13□□□□□ -0.31
SHROOM1-205ENST00000488072 HIST1H1BP16401 226 aaKnown RBP13.13□□□□□ -0.31
SHROOM1-205ENST00000488072 SYNJ2BPP57105 145 aa13.13□□□□□ -0.31
SHROOM1-205ENST00000488072 PDLIM3Q53GG5 364 aaPredicted RBP13.13□□□□□ -0.31
SHROOM1-205ENST00000488072 ZNF114Q8NC26 417 aa13.13□□□□□ -0.31
SHROOM1-205ENST00000488072 EEF1AKMT3Q96AZ1 226 aa13.13□□□□□ -0.31
SHROOM1-205ENST00000488072 FNDC4Q9H6D8 234 aaPredicted RBP13.13□□□□□ -0.31
SHROOM1-205ENST00000488072 RANGRFQ9HD47 186 aaPredicted RBP13.13□□□□□ -0.31
SHROOM1-205ENST00000488072 HEYLQ9NQ87 328 aaPredicted RBP13.13□□□□□ -0.31
SHROOM1-205ENST00000488072 TMED3Q9Y3Q3 217 aa13.13□□□□□ -0.31
SHROOM1-205ENST00000488072 DNAH3Q8TD57 4116 aa13.12□□□□□ -0.31
SHROOM1-205ENST00000488072 DUXBA0A1W2PPF3 345 aa13.12□□□□□ -0.31
SHROOM1-205ENST00000488072 INS-IGF2F8WCM5 200 aa13.12□□□□□ -0.31
SHROOM1-205ENST00000488072 OR8U8P0C7N1 319 aa13.12□□□□□ -0.31
SHROOM1-205ENST00000488072 BSXQ3C1V8 233 aa13.12□□□□□ -0.31
SHROOM1-205ENST00000488072 C12orf45Q8N5I9 185 aaPredicted RBP13.12□□□□□ -0.31
SHROOM1-205ENST00000488072 UBAC2Q8NBM4 344 aa13.12□□□□□ -0.31
SHROOM1-205ENST00000488072 WDR89Q96FK6 387 aaPredicted RBP13.12□□□□□ -0.31
SHROOM1-205ENST00000488072 CHRDL1Q9BU40 450 aa13.12□□□□□ -0.31
SHROOM1-205ENST00000488072 ENY2Q9NPA8 101 aa13.12□□□□□ -0.31
SHROOM1-205ENST00000488072 OR2T8A6NH00 312 aa13.11□□□□□ -0.31
SHROOM1-205ENST00000488072 OVOL1O14753 267 aa13.11□□□□□ -0.31
SHROOM1-205ENST00000488072 IL5P05113 134 aa13.11□□□□□ -0.31
SHROOM1-205ENST00000488072 SNCAP37840 140 aa13.11□□□□□ -0.31
SHROOM1-205ENST00000488072 DEFA1P59665 94 aa13.11□□□□□ -0.31
SHROOM1-205ENST00000488072 DEFA3P59666 94 aa13.11□□□□□ -0.31
SHROOM1-205ENST00000488072 KRTAP10-11P60412 298 aa13.11□□□□□ -0.31
SHROOM1-205ENST00000488072 POLR2GP62487 172 aaKnown RBP eCLIP13.11□□□□□ -0.31
SHROOM1-205ENST00000488072 KLF5Q13887 457 aaPredicted RBP13.11□□□□□ -0.31
SHROOM1-205ENST00000488072 BEAN1Q3B7T3 259 aa13.11□□□□□ -0.31
SHROOM1-205ENST00000488072 PVRIGQ6DKI7 326 aa13.11□□□□□ -0.31
SHROOM1-205ENST00000488072 DTD1Q8TEA8 209 aa13.11□□□□□ -0.31
SHROOM1-205ENST00000488072 NOTCH1P46531 2555 aa13.1□□□□□ -0.31
SHROOM1-205ENST00000488072 IGHV3OR16-8A0A075B7F1 116 aa13.1□□□□□ -0.31
SHROOM1-205ENST00000488072 FAM25EA8MYX2 175 aa13.1□□□□□ -0.31
SHROOM1-205ENST00000488072 SEC14L6B5MCN3 397 aa13.1□□□□□ -0.31
SHROOM1-205ENST00000488072 SIX6O95475 246 aa13.1□□□□□ -0.31
SHROOM1-205ENST00000488072 ADMP35318 185 aa13.1□□□□□ -0.31
SHROOM1-205ENST00000488072 ARL3P36405 182 aa13.1□□□□□ -0.31
SHROOM1-205ENST00000488072 IAH1Q2TAA2 248 aaPredicted RBP13.1□□□□□ -0.31
SHROOM1-205ENST00000488072 PLET1Q6UQ28 207 aa13.1□□□□□ -0.31
SHROOM1-205ENST00000488072 IL34Q6ZMJ4 242 aa13.1□□□□□ -0.31
SHROOM1-205ENST00000488072 ZBTB8BQ8NAP8 495 aaPredicted RBP13.1□□□□□ -0.31
SHROOM1-205ENST00000488072 OR4D5Q8NGN0 318 aa13.1□□□□□ -0.31
SHROOM1-205ENST00000488072 MARVELD1Q9BSK0 173 aa13.1□□□□□ -0.31
SHROOM1-205ENST00000488072 C21orf62Q9NYP8 219 aa13.1□□□□□ -0.31
SHROOM1-205ENST00000488072 GSKIPQ9P0R6 139 aa13.1□□□□□ -0.31
SHROOM1-205ENST00000488072 WRBO00258 174 aa13.09□□□□□ -0.31
SHROOM1-205ENST00000488072 TMEM50AO95807 157 aa13.09□□□□□ -0.31
SHROOM1-205ENST00000488072 SLC25A6P12236 298 aa13.09□□□□□ -0.31
SHROOM1-205ENST00000488072 RPEL1Q2QD12 228 aa13.09□□□□□ -0.31
SHROOM1-205ENST00000488072 Q56UQ5 140 aa13.09□□□□□ -0.31
SHROOM1-205ENST00000488072 UNQ9165/PRO28630Q6UXU0 137 aa13.09□□□□□ -0.31
SHROOM1-205ENST00000488072 ADAMTSL5Q6ZMM2 481 aa13.09□□□□□ -0.31
SHROOM1-205ENST00000488072 SLC24A4Q8NFF2 622 aa13.09□□□□□ -0.31
SHROOM1-205ENST00000488072 VN1R17PQ8TDU5 208 aa13.09□□□□□ -0.31
SHROOM1-205ENST00000488072 OR4C12Q96R67 309 aa13.09□□□□□ -0.31
SHROOM1-205ENST00000488072 H3BP45 60 aa13.08□□□□□ -0.32
SHROOM1-205ENST00000488072 SCGB1D2O95969 90 aa13.08□□□□□ -0.32
SHROOM1-205ENST00000488072 IFNA21P01568 189 aa13.08□□□□□ -0.32
SHROOM1-205ENST00000488072 RCC1LQ96I51 464 aaKnown RBP13.08□□□□□ -0.32
SHROOM1-205ENST00000488072 CXorf58Q96LI9 332 aa13.08□□□□□ -0.32
SHROOM1-205ENST00000488072 THYN1Q9P016 225 aa13.08□□□□□ -0.32
SHROOM1-205ENST00000488072 TRBV7-1A0A0A6YYK4 115 aa13.07□□□□□ -0.32
SHROOM1-205ENST00000488072 C15orf62A8K5M9 175 aa13.07□□□□□ -0.32
SHROOM1-205ENST00000488072 TGOLN2O43493 480 aa13.07□□□□□ -0.32
SHROOM1-205ENST00000488072 GGCTO75223 188 aaKnown RBP13.07□□□□□ -0.32
SHROOM1-205ENST00000488072 IFNA10P01566 189 aa13.07□□□□□ -0.32
SHROOM1-205ENST00000488072 ZP3P21754 424 aa13.07□□□□□ -0.32
SHROOM1-205ENST00000488072 NPY1RP25929 384 aa13.07□□□□□ -0.32
SHROOM1-205ENST00000488072 ID3Q02535 119 aa13.07□□□□□ -0.32
SHROOM1-205ENST00000488072 C2orf83Q53S99 150 aa13.07□□□□□ -0.32
SHROOM1-205ENST00000488072 CACNG8Q8WXS5 425 aa13.07□□□□□ -0.32
SHROOM1-205ENST00000488072 PAIP2BQ9ULR5 123 aaKnown RBP13.07□□□□□ -0.32
SHROOM1-205ENST00000488072 SYNGR2O43760 224 aa13.06□□□□□ -0.32
SHROOM1-205ENST00000488072 SAP30O75446 220 aa13.06□□□□□ -0.32
SHROOM1-205ENST00000488072 CCNKO75909 580 aa13.06□□□□□ -0.32
SHROOM1-205ENST00000488072 MBPP02686 304 aaPredicted RBP13.06□□□□□ -0.32
SHROOM1-205ENST00000488072 CSN3P07498 182 aa13.06□□□□□ -0.32
SHROOM1-205ENST00000488072 CTSGP08311 255 aa13.06□□□□□ -0.32
SHROOM1-205ENST00000488072 HTR2BP41595 481 aa13.06□□□□□ -0.32
SHROOM1-205ENST00000488072 PAX9P55771 341 aa13.06□□□□□ -0.32
SHROOM1-205ENST00000488072 DEFA6Q01524 100 aa13.06□□□□□ -0.32
SHROOM1-205ENST00000488072 ACSM6Q6P461 480 aa13.06□□□□□ -0.32
SHROOM1-205ENST00000488072 OR1L6Q8NGR2 347 aa13.06□□□□□ -0.32
SHROOM1-205ENST00000488072 HIPK2Q9H2X6 1198 aa13.06□□□□□ -0.32
SHROOM1-205ENST00000488072 C5orf51A6NDU8 294 aa13.05□□□□□ -0.32
SHROOM1-205ENST00000488072 GOSR2O14653 212 aa13.05□□□□□ -0.32
SHROOM1-205ENST00000488072 CYB5BO43169 146 aa13.05□□□□□ -0.32
SHROOM1-205ENST00000488072 ZNF207O43670 478 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms