RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 LLPHQ9BRT6 129 aaKnown RBP0.59□□□□□ -2.31
PTEN-204ENST00000487939 MIXL1Q9H2W2 232 aa0.59□□□□□ -2.31
PTEN-204ENST00000487939 OR51I1Q9H343 314 aa0.59□□□□□ -2.31
PTEN-204ENST00000487939 CEP192Q8TEP8 1941 aa0.59□□□□□ -2.32
PTEN-204ENST00000487939 COL4A5P29400 1685 aa0.59□□□□□ -2.32
PTEN-204ENST00000487939 CLDN25C9JDP6 229 aa0.58□□□□□ -2.32
PTEN-204ENST00000487939 OR1I1O60431 355 aa0.58□□□□□ -2.32
PTEN-204ENST00000487939 DEXIO95424 95 aa0.58□□□□□ -2.32
PTEN-204ENST00000487939 KRTAP19-3Q7Z4W3 81 aa0.58□□□□□ -2.32
PTEN-204ENST00000487939 OR4E2Q8NGC2 313 aa0.58□□□□□ -2.32
PTEN-204ENST00000487939 OR13C4Q8NGS5 318 aa0.58□□□□□ -2.32
PTEN-204ENST00000487939 MRPL30Q8TCC3 161 aaKnown RBP0.58□□□□□ -2.32
PTEN-204ENST00000487939 XPNPEP1Q9NQW7 623 aa0.58□□□□□ -2.32
PTEN-204ENST00000487939 ATP6V1DQ9Y5K8 247 aa0.58□□□□□ -2.32
PTEN-204ENST00000487939 ECM29Q5VYK3 1845 aa0.58□□□□□ -2.32
PTEN-204ENST00000487939 HECW1Q76N89 1606 aa0.57□□□□□ -2.32
PTEN-204ENST00000487939 C2orf70A6NJV1 201 aa0.57□□□□□ -2.32
PTEN-204ENST00000487939 M0R2N4 97 aa0.57□□□□□ -2.32
PTEN-204ENST00000487939 COX6A1P12074 109 aa0.57□□□□□ -2.32
PTEN-204ENST00000487939 MIFP14174 115 aa0.57□□□□□ -2.32
PTEN-204ENST00000487939 SPI1P17947 270 aa0.57□□□□□ -2.32
PTEN-204ENST00000487939 AP2S1P53680 142 aaPredicted RBP0.57□□□□□ -2.32
PTEN-204ENST00000487939 TCL1AP56279 114 aa0.57□□□□□ -2.32
PTEN-204ENST00000487939 TPM4P67936 248 aa0.57□□□□□ -2.32
PTEN-204ENST00000487939 GDF5OSQ5U4N7 250 aa0.57□□□□□ -2.32
PTEN-204ENST00000487939 SFXN4Q6P4A7 337 aa0.57□□□□□ -2.32
PTEN-204ENST00000487939 BPIFA4PQ86YQ2 179 aa0.57□□□□□ -2.32
PTEN-204ENST00000487939 LRRC25Q8N386 305 aaPredicted RBP0.57□□□□□ -2.32
PTEN-204ENST00000487939 CMTM6Q9NX76 183 aa0.57□□□□□ -2.32
PTEN-204ENST00000487939 TP73-AS1Q9UF72 201 aa0.57□□□□□ -2.32
PTEN-204ENST00000487939 LSM5Q9Y4Y9 91 aaKnown RBP0.57□□□□□ -2.32
PTEN-204ENST00000487939 TNRC6AQ8NDV7 1962 aaKnown RBP0.57□□□□□ -2.32
PTEN-204ENST00000487939 RIC1Q4ADV7 1423 aa0.56□□□□□ -2.32
PTEN-204ENST00000487939 C9orf84Q5VXU9 1444 aa0.56□□□□□ -2.32
PTEN-204ENST00000487939 EML5Q05BV3 1969 aa0.56□□□□□ -2.32
PTEN-204ENST00000487939 IGKV1-5P01602 117 aa0.56□□□□□ -2.32
PTEN-204ENST00000487939 OR5G3P0C626 314 aa0.56□□□□□ -2.32
PTEN-204ENST00000487939 BAALC-AS2P0C853 105 aa0.56□□□□□ -2.32
PTEN-204ENST00000487939 CRYGAP11844 174 aa0.56□□□□□ -2.32
PTEN-204ENST00000487939 HBA1P69905 142 aa0.56□□□□□ -2.32
PTEN-204ENST00000487939 PMAIP1Q13794 54 aa0.56□□□□□ -2.32
PTEN-204ENST00000487939 CD200R1LQ6Q8B3 271 aa0.56□□□□□ -2.32
PTEN-204ENST00000487939 MIR17HGQ75NE6 70 aa0.56□□□□□ -2.32
PTEN-204ENST00000487939 OPTNQ96CV9 577 aa0.56□□□□□ -2.32
PTEN-204ENST00000487939 ULBP3Q9BZM4 244 aa0.56□□□□□ -2.32
PTEN-204ENST00000487939 NKIRAS1Q9NYS0 192 aa0.56□□□□□ -2.32
PTEN-204ENST00000487939 PLXND1Q9Y4D7 1925 aa0.56□□□□□ -2.32
PTEN-204ENST00000487939 TOPBP1Q92547 1522 aa0.55□□□□□ -2.32
PTEN-204ENST00000487939 TNNC2P02585 160 aa0.55□□□□□ -2.32
PTEN-204ENST00000487939 ISG15P05161 165 aa0.55□□□□□ -2.32
PTEN-204ENST00000487939 RHEBQ15382 184 aa0.55□□□□□ -2.32
PTEN-204ENST00000487939 CDKL4Q5MAI5 379 aa0.55□□□□□ -2.32
PTEN-204ENST00000487939 LPCAT4Q643R3 524 aa0.55□□□□□ -2.32
PTEN-204ENST00000487939 CLVS1Q8IUQ0 354 aaPredicted RBP0.55□□□□□ -2.32
PTEN-204ENST00000487939 DNAJC9Q8WXX5 260 aa0.55□□□□□ -2.32
PTEN-204ENST00000487939 ACER3Q9NUN7 267 aa0.55□□□□□ -2.32
PTEN-204ENST00000487939 HECW2Q9P2P5 1572 aa0.54□□□□□ -2.32
PTEN-204ENST00000487939 SCN3AQ9NY46 2000 aa0.54□□□□□ -2.32
PTEN-204ENST00000487939 TRAV1-1A0A0B4J248 108 aa0.54□□□□□ -2.32
PTEN-204ENST00000487939 EEF1E1-BLOC1S5C9J1V9 151 aa0.54□□□□□ -2.32
PTEN-204ENST00000487939 CETN3O15182 167 aa0.54□□□□□ -2.32
PTEN-204ENST00000487939 DCTN3O75935 186 aa0.54□□□□□ -2.32
PTEN-204ENST00000487939 RHOGP84095 191 aa0.54□□□□□ -2.32
PTEN-204ENST00000487939 COTL1Q14019 142 aa0.54□□□□□ -2.32
PTEN-204ENST00000487939 KHDC3LQ587J8 217 aa0.54□□□□□ -2.32
PTEN-204ENST00000487939 ALKAL1Q6UXT8 129 aa0.54□□□□□ -2.32
PTEN-204ENST00000487939 OR5A1Q8NGJ0 315 aa0.54□□□□□ -2.32
PTEN-204ENST00000487939 DDI1Q8WTU0 396 aa0.54□□□□□ -2.32
PTEN-204ENST00000487939 TMEM147Q9BVK8 224 aa0.54□□□□□ -2.32
PTEN-204ENST00000487939 TAS2R4Q9NYW5 299 aa0.54□□□□□ -2.32
PTEN-204ENST00000487939 ZNF106Q9H2Y7 1883 aaKnown RBP0.54□□□□□ -2.32
PTEN-204ENST00000487939 MUC5ACP98088 5654 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 TGIF2-C20orf24A0A0A6YYL0 155 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 KCNK1O00180 336 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 OR2B3O76000 313 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 UBL3O95164 117 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 TCL1BO95988 128 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 IFNA10P01566 189 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 CALB1P05937 261 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 DEFA1P59665 94 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 HIST2H3PS2Q5TEC6 136 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 C8orf74Q6P047 294 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 SBSPONQ8IVN8 264 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 SFT2D1Q8WV19 159 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 SLC35B4Q969S0 331 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 PTH2Q96A98 100 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 IMP4Q96G21 291 aaKnown RBP0.53□□□□□ -2.32
PTEN-204ENST00000487939 AMELYQ99218 206 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 COMMD5Q9GZQ3 224 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 PRTFDC1Q9NRG1 225 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 PKIGQ9Y2B9 76 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 MCM3APO60318 1980 aa0.53□□□□□ -2.32
PTEN-204ENST00000487939 SNAPC4Q5SXM2 1469 aa0.53□□□□□ -2.33
PTEN-204ENST00000487939 LAMA4Q16363 1823 aa0.52□□□□□ -2.33
PTEN-204ENST00000487939 INE1O15225 51 aa0.52□□□□□ -2.33
PTEN-204ENST00000487939 TGOLN2O43493 480 aa0.52□□□□□ -2.33
PTEN-204ENST00000487939 SSR2P43308 183 aa0.52□□□□□ -2.33
PTEN-204ENST00000487939 LPCAT3Q6P1A2 487 aa0.52□□□□□ -2.33
PTEN-204ENST00000487939 C20orf196Q8IYI0 205 aa0.52□□□□□ -2.33
PTEN-204ENST00000487939 TMEM86BQ8N661 226 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms