RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 CRYGAP11844 174 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 COX6A1P12074 109 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 SPI1P17947 270 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 MYL12AP19105 171 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 NAA20P61599 178 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 TFAMQ00059 246 aaKnown RBP0.02□□□□□ -2.41
SMC4-219ENST00000487747 IFITM2Q01629 132 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 ASB16-AS1Q495Z4 193 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 SPANXN5Q5MJ07 72 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 CLVS2Q5SYC1 327 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 RPL22L1Q6P5R6 122 aaKnown RBP0.02□□□□□ -2.41
SMC4-219ENST00000487747 LRRN1Q6UXK5 716 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 LINC00471Q8N535 108 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 OR13C4Q8NGS5 318 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 OR2T4Q8NH00 348 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 NABP2Q9BQ15 211 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 KRTAP2-4Q9BYR9 128 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 KRTAP2-1Q9BYU5 128 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 WDR61Q9GZS3 305 aaKnown RBP0.02□□□□□ -2.41
SMC4-219ENST00000487747 TP73-AS1Q9UF72 201 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 NUBP2Q9Y5Y2 271 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 HFM1A2PYH4 1435 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 DISP2A7MBM2 1401 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 BCL9O00512 1426 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 ZNF609O15014 1411 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 ZFYVE9O95405 1425 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 CPSF1Q10570 1443 aaKnown RBP0.02□□□□□ -2.41
SMC4-219ENST00000487747 NAIPQ13075 1403 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 EEA1Q15075 1411 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 MYOM3Q5VTT5 1437 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 C10orf71Q711Q0 1435 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 ERBINQ96RT1 1412 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 KIAA1107Q9UPP5 1409 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 UHRF1BP1LA0JNW5 1464 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 MED14O60244 1454 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 ADGRL2O95490 1459 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 POLA1P09884 1462 aaPredicted RBP0.02□□□□□ -2.41
SMC4-219ENST00000487747 NCAPD3P42695 1498 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 GAPVD1Q14C86 1478 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 BCL9LQ86UU0 1499 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 MAGI1Q96QZ7 1491 aaPredicted RBP0.02□□□□□ -2.41
SMC4-219ENST00000487747 IFT140Q96RY7 1462 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 CECR2Q9BXF3 1484 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 CD163L1Q9NR16 1453 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 MRC2Q9UBG0 1479 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 SLIT1O75093 1534 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 PRDM15P57071 1507 aaPredicted RBP0.02□□□□□ -2.41
SMC4-219ENST00000487747 CDK13Q14004 1512 aaKnown RBP0.02□□□□□ -2.41
SMC4-219ENST00000487747 GLI2P10070 1586 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 PIK3C2BO00750 1634 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 E9PCH4 1651 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 ZNF462Q96JM2 2506 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 A0A0D9SG52 128 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 LOC107984156A0A0G2JMH3 177 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 A0A1W2PPM0 123 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 C9orf170A2RU37 121 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 A6NN06 94 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 LYZL6O75951 148 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 CFDP00746 253 aaPredicted RBP0.01□□□□□ -2.41
SMC4-219ENST00000487747 MT1AP04731 61 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 MT1EP04732 61 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 TSPAN19P0C672 248 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 BAALC-AS2P0C853 105 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 COX5BP10606 129 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 UCHL3P15374 230 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 HIST1H2BOP23527 126 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 HOXA6P31267 233 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 HIST1H2BBP33778 126 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 HIST1H2BDP58876 126 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 RAB5BP61020 215 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 HIST1H2BCP62807 126 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 SKP1P63208 163 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 CCL7P80098 99 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 SPCS2Q15005 226 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 GRK1Q15835 563 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 HIST2H2BEQ16778 126 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 KRTAP19-8Q3LI54 63 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 KRTAP19-6Q3LI70 58 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 KRTAP19-5Q3LI72 72 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 KRTAP19-7Q3SYF9 63 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 SPRNQ5BIV9 151 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 SPANXN3Q5MJ09 141 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.01□□□□□ -2.41
SMC4-219ENST00000487747 LYPD5Q6UWN5 251 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 Q6ZS49 121 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 KRTAP8-1Q8IUC2 63 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 ARL17AQ8IVW1 177 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 LRRC25Q8N386 305 aaPredicted RBP0.01□□□□□ -2.41
SMC4-219ENST00000487747 TERB2Q8NHR7 220 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 PIGXQ8TBF5 258 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 HIST1H2BHQ93079 126 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 PPP1R14BQ96C90 147 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 ATP6V1G3Q96LB4 118 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 SCGB3A1Q96QR1 104 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 HIST1H2BNQ99877 126 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 HIST1H2BMQ99879 126 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 TRIM4Q9C037 500 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 PRO3102Q9H379 93 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 PLAC8Q9NZF1 115 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 OPTCQ9UBM4 332 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms