RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 STAG3L2P0CL84 134 aa9.72□□□□□ -0.85
TRA2B-214ENST00000487615 STAG3L3P0CL85 134 aa9.72□□□□□ -0.85
TRA2B-214ENST00000487615 SSX7Q7RTT5 188 aa9.72□□□□□ -0.85
TRA2B-214ENST00000487615 PRNTQ86SH4 94 aa9.72□□□□□ -0.85
TRA2B-214ENST00000487615 HOXA5P20719 270 aa9.72□□□□□ -0.85
TRA2B-214ENST00000487615 MFAP4P55083 255 aa9.72□□□□□ -0.85
TRA2B-214ENST00000487615 PKIAP61925 76 aa9.72□□□□□ -0.85
TRA2B-214ENST00000487615 C10orf91Q5T1B1 145 aa9.72□□□□□ -0.85
TRA2B-214ENST00000487615 SLC25A48Q6ZT89 311 aaKnown RBP9.72□□□□□ -0.85
TRA2B-214ENST00000487615 TMEM183AQ8IXX5 376 aa9.72□□□□□ -0.85
TRA2B-214ENST00000487615 GBGT1Q8N5D6 347 aa9.72□□□□□ -0.85
TRA2B-214ENST00000487615 SSBP3Q9BWW4 388 aaPredicted RBP9.72□□□□□ -0.85
TRA2B-214ENST00000487615 TRAV30A0A087WSZ9 112 aa9.71□□□□□ -0.85
TRA2B-214ENST00000487615 PAFAH1B2P68402 229 aa9.71□□□□□ -0.85
TRA2B-214ENST00000487615 OR10W1Q8NGF6 305 aa9.71□□□□□ -0.85
TRA2B-214ENST00000487615 TNFRSF14Q92956 283 aa9.71□□□□□ -0.85
TRA2B-214ENST00000487615 CA7P43166 264 aa9.71□□□□□ -0.86
TRA2B-214ENST00000487615 RIGQ13278 110 aa9.71□□□□□ -0.86
TRA2B-214ENST00000487615 IGLV3-9A0A075B6K5 115 aa9.71□□□□□ -0.86
TRA2B-214ENST00000487615 H3BTX0 84 aa9.71□□□□□ -0.86
TRA2B-214ENST00000487615 NBEAP1P0C6P0 100 aa9.71□□□□□ -0.86
TRA2B-214ENST00000487615 C2orf83Q53S99 150 aa9.71□□□□□ -0.86
TRA2B-214ENST00000487615 CRIP3Q6Q6R5 217 aa9.71□□□□□ -0.86
TRA2B-214ENST00000487615 PRSS3P2Q8NHM4 247 aa9.71□□□□□ -0.86
TRA2B-214ENST00000487615 FAM122AQ96E09 287 aa9.71□□□□□ -0.86
TRA2B-214ENST00000487615 MGST2Q99735 147 aa9.71□□□□□ -0.86
TRA2B-214ENST00000487615 ARL2-SNX15V9GYD0 113 aa9.71□□□□□ -0.86
TRA2B-214ENST00000487615 M0R2Z0 102 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 SLC17A3O00476 420 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 GCGP01275 180 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 PRB3Q04118 309 aaPredicted RBP9.7□□□□□ -0.86
TRA2B-214ENST00000487615 PPP1R27Q86WC6 154 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 GRAMD2BQ96HH9 432 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 SGK494Q96LW2 274 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 IL36BQ9NZH7 164 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 TRBV24-1A0A075B6N3 115 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 CXCL1P09341 107 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 C1QTNF9P0C862 333 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 CBLN1P23435 193 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 FCGR2BP31994 310 aaPredicted RBP9.7□□□□□ -0.86
TRA2B-214ENST00000487615 C11orf53Q8IXP5 236 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 TEX45Q8NA69 505 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 NCOR1P1Q9H4R4 102 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 MALRD1Q5VYJ5 2156 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 C15orf65H3BRN8 121 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 CD99P14209 185 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 SCGB2A2Q13296 93 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 C10orf55Q5SWW7 151 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 CACNA1BQ00975 2339 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 UBE2CO00762 179 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 HIST1H2BKO60814 126 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 IGKV1D-33P01593 117 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 IGKV1-33P01594 117 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 HIST1H2BJP06899 126 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 IGHV1-8P0DP01 117 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 HIST1H2BOP23527 126 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 HIST1H2BBP33778 126 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 HIST1H2BDP58876 126 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 HIST1H2BCP62807 126 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 HIST2H2BEQ16778 126 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.7□□□□□ -0.86
TRA2B-214ENST00000487615 FAM90A2PQ658T7 463 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 UNQ5815/PRO19632Q6UWF5 114 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 ZCCHC14Q8WYQ9 949 aaKnown RBP9.7□□□□□ -0.86
TRA2B-214ENST00000487615 HIST1H2BHQ93079 126 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 HIST1H2BNQ99877 126 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 HIST1H2BMQ99879 126 aa9.7□□□□□ -0.86
TRA2B-214ENST00000487615 TRBV9A0A0B4J1U6 114 aa9.69□□□□□ -0.86
TRA2B-214ENST00000487615 MAS1LP35410 378 aa9.69□□□□□ -0.86
TRA2B-214ENST00000487615 IGF2-ASQ6U949 168 aa9.69□□□□□ -0.86
TRA2B-214ENST00000487615 SRSF12Q8WXF0 261 aaKnown RBP9.69□□□□□ -0.86
TRA2B-214ENST00000487615 CBLN4Q9NTU7 201 aa9.69□□□□□ -0.86
TRA2B-214ENST00000487615 PGPEP1LA6NFU8 196 aa9.69□□□□□ -0.86
TRA2B-214ENST00000487615 IL4P05112 153 aa9.69□□□□□ -0.86
TRA2B-214ENST00000487615 S100A4P26447 101 aaKnown RBP9.69□□□□□ -0.86
TRA2B-214ENST00000487615 ZNF672Q499Z4 452 aaPredicted RBP9.69□□□□□ -0.86
TRA2B-214ENST00000487615 C1QL4Q86Z23 238 aa9.69□□□□□ -0.86
TRA2B-214ENST00000487615 DKK4Q9UBT3 224 aa9.69□□□□□ -0.86
TRA2B-214ENST00000487615 MED12LQ86YW9 2145 aa9.69□□□□□ -0.86
TRA2B-214ENST00000487615 C5orf52A6NGY3 159 aa9.69□□□□□ -0.86
TRA2B-214ENST00000487615 CSN3P07498 182 aa9.69□□□□□ -0.86
TRA2B-214ENST00000487615 MYOD1P15172 320 aa9.69□□□□□ -0.86
TRA2B-214ENST00000487615 ZNF137PP52743 207 aa9.69□□□□□ -0.86
TRA2B-214ENST00000487615 CLEC2AQ6UVW9 174 aa9.69□□□□□ -0.86
TRA2B-214ENST00000487615 C5orf17Q8NAS9 161 aa9.69□□□□□ -0.86
TRA2B-214ENST00000487615 Q8TCH9 128 aa9.69□□□□□ -0.86
TRA2B-214ENST00000487615 HSPB9Q9BQS6 159 aa9.69□□□□□ -0.86
TRA2B-214ENST00000487615 CHD7Q9P2D1 2997 aa9.69□□□□□ -0.86
TRA2B-214ENST00000487615 A0A1W2PRE2 83 aa9.68□□□□□ -0.86
TRA2B-214ENST00000487615 TCRBV4S1A1TA0A5B7 111 aa9.68□□□□□ -0.86
TRA2B-214ENST00000487615 GRIFINA4D1Z8 144 aa9.68□□□□□ -0.86
TRA2B-214ENST00000487615 PEX7O00628 323 aa9.68□□□□□ -0.86
TRA2B-214ENST00000487615 CEACAM4O75871 244 aa9.68□□□□□ -0.86
TRA2B-214ENST00000487615 IGKV1-16P04430 117 aa9.68□□□□□ -0.86
TRA2B-214ENST00000487615 TMEM177Q53S58 311 aa9.68□□□□□ -0.86
TRA2B-214ENST00000487615 TMEM167AQ8TBQ9 72 aa9.68□□□□□ -0.86
TRA2B-214ENST00000487615 H0YJW9 148 aa9.68□□□□□ -0.86
TRA2B-214ENST00000487615 AMY1AP04745 511 aa9.68□□□□□ -0.86
TRA2B-214ENST00000487615 KHDC1LQ5JSQ8 128 aa9.68□□□□□ -0.86
TRA2B-214ENST00000487615 ELOVL1Q9BW60 279 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms