RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 SMPXQ9UHP9 88 aa17.55■□□□□ 0.4
PLOD3-215ENST00000487563 IGHV7-4-1A0A0J9YVY3 117 aa17.54■□□□□ 0.4
PLOD3-215ENST00000487563 C3orf85A0A1B0GTC6 90 aa17.54■□□□□ 0.4
PLOD3-215ENST00000487563 RGS5O15539 181 aa17.54■□□□□ 0.4
PLOD3-215ENST00000487563 IFNA17P01571 189 aa17.54■□□□□ 0.4
PLOD3-215ENST00000487563 IGKV1-5P01602 117 aa17.54■□□□□ 0.4
PLOD3-215ENST00000487563 FCGR2BP31994 310 aaPredicted RBP17.54■□□□□ 0.4
PLOD3-215ENST00000487563 TAS2R19P59542 299 aa17.54■□□□□ 0.4
PLOD3-215ENST00000487563 ABHD1Q96SE0 405 aa17.54■□□□□ 0.4
PLOD3-215ENST00000487563 RHPN1-AS1Q9BWJ2 59 aa17.54■□□□□ 0.4
PLOD3-215ENST00000487563 IGHV3-49A0A0A0MS15 119 aa17.53■□□□□ 0.4
PLOD3-215ENST00000487563 RAB3DO95716 219 aa17.53■□□□□ 0.4
PLOD3-215ENST00000487563 GPR141Q7Z602 305 aa17.53■□□□□ 0.4
PLOD3-215ENST00000487563 TMEM229BQ8NBD8 167 aa17.53■□□□□ 0.4
PLOD3-215ENST00000487563 RNF2Q99496 336 aa17.53■□□□□ 0.4
PLOD3-215ENST00000487563 NXF2Q9GZY0 626 aaKnown RBP17.53■□□□□ 0.4
PLOD3-215ENST00000487563 CHEK1O14757 476 aa17.52■□□□□ 0.4
PLOD3-215ENST00000487563 HOXA1P49639 335 aaPredicted RBP17.52■□□□□ 0.4
PLOD3-215ENST00000487563 DEFB135Q30KP9 77 aa17.52■□□□□ 0.4
PLOD3-215ENST00000487563 STPG3Q8N7X2 389 aa17.52■□□□□ 0.4
PLOD3-215ENST00000487563 OR4D10Q8NGI6 311 aa17.52■□□□□ 0.4
PLOD3-215ENST00000487563 OR13C8Q8NGS7 320 aa17.52■□□□□ 0.4
PLOD3-215ENST00000487563 TERB2Q8NHR7 220 aa17.52■□□□□ 0.4
PLOD3-215ENST00000487563 RRNAD1Q96FB5 475 aaKnown RBP17.52■□□□□ 0.4
PLOD3-215ENST00000487563 GINS3Q9BRX5 216 aa17.52■□□□□ 0.4
PLOD3-215ENST00000487563 MRPS26Q9BYN8 205 aaKnown RBP17.52■□□□□ 0.4
PLOD3-215ENST00000487563 C6orf62Q9GZU0 229 aaPredicted RBP17.52■□□□□ 0.4
PLOD3-215ENST00000487563 LYSTQ99698 3801 aa17.51■□□□□ 0.39
PLOD3-215ENST00000487563 IGKV3-7A0A075B6H7 116 aa17.51■□□□□ 0.39
PLOD3-215ENST00000487563 TRAV14DV4A0A0A6YYC5 116 aa17.51■□□□□ 0.39
PLOD3-215ENST00000487563 UBE2CO00762 179 aa17.51■□□□□ 0.39
PLOD3-215ENST00000487563 ST8SIA3O43173 380 aa17.51■□□□□ 0.39
PLOD3-215ENST00000487563 SPRY2O43597 315 aa17.51■□□□□ 0.39
PLOD3-215ENST00000487563 RPL35AP18077 110 aaKnown RBP17.51■□□□□ 0.39
PLOD3-215ENST00000487563 BMI1P35226 326 aa17.51■□□□□ 0.39
PLOD3-215ENST00000487563 NPBWR1P48145 328 aa17.51■□□□□ 0.39
PLOD3-215ENST00000487563 TFPI2P48307 235 aa17.51■□□□□ 0.39
PLOD3-215ENST00000487563 SP6Q3SY56 376 aa17.51■□□□□ 0.39
PLOD3-215ENST00000487563 STEAP1BQ6NZ63 245 aa17.51■□□□□ 0.39
PLOD3-215ENST00000487563 Q6ZWC4 215 aa17.51■□□□□ 0.39
PLOD3-215ENST00000487563 DUSP18Q8NEJ0 188 aa17.51■□□□□ 0.39
PLOD3-215ENST00000487563 OR10C1Q96KK4 312 aa17.51■□□□□ 0.39
PLOD3-215ENST00000487563 ENY2Q9NPA8 101 aa17.51■□□□□ 0.39
PLOD3-215ENST00000487563 TP53TG1Q9Y2A0 90 aa17.51■□□□□ 0.39
PLOD3-215ENST00000487563 A0A0B4J293 547 aa17.5■□□□□ 0.39
PLOD3-215ENST00000487563 KIR2DL5BA0A0G2JN68 375 aa17.5■□□□□ 0.39
PLOD3-215ENST00000487563 KIR2DL5BA0A0G2JPC4 375 aa17.5■□□□□ 0.39
PLOD3-215ENST00000487563 GABARAPH6UMI1 98 aa17.5■□□□□ 0.39
PLOD3-215ENST00000487563 CD74P04233 296 aa17.5■□□□□ 0.39
PLOD3-215ENST00000487563 SUB1P53999 127 aaKnown RBP eCLIP17.5■□□□□ 0.39
PLOD3-215ENST00000487563 KIR2DL5AQ8N109 375 aa17.5■□□□□ 0.39
PLOD3-215ENST00000487563 KIR2DL5BQ8NHK3 375 aa17.5■□□□□ 0.39
PLOD3-215ENST00000487563 MARCH1Q8TCQ1 289 aa17.5■□□□□ 0.39
PLOD3-215ENST00000487563 GALNT14Q96FL9 552 aa17.5■□□□□ 0.39
PLOD3-215ENST00000487563 DNAH1Q9P2D7 4330 aa17.5■□□□□ 0.39
PLOD3-215ENST00000487563 IGHV3OR16-13A0A075B7E8 117 aa17.49■□□□□ 0.39
PLOD3-215ENST00000487563 IGHV3-74A0A0B4J1X5 117 aa17.49■□□□□ 0.39
PLOD3-215ENST00000487563 P0C879 139 aa17.49■□□□□ 0.39
PLOD3-215ENST00000487563 MRPS10P82664 201 aaKnown RBP17.49■□□□□ 0.39
PLOD3-215ENST00000487563 ZNF414Q96IQ9 312 aa17.49■□□□□ 0.39
PLOD3-215ENST00000487563 MIXL1Q9H2W2 232 aa17.49■□□□□ 0.39
PLOD3-215ENST00000487563 C14orf166Q9Y224 244 aaKnown RBP17.49■□□□□ 0.39
PLOD3-215ENST00000487563 A0A0J9YWU9 116 aa17.48■□□□□ 0.39
PLOD3-215ENST00000487563 CXorf65A6NEN9 183 aa17.48■□□□□ 0.39
PLOD3-215ENST00000487563 CORTO00230 105 aa17.48■□□□□ 0.39
PLOD3-215ENST00000487563 B3GALNT1O75752 331 aa17.48■□□□□ 0.39
PLOD3-215ENST00000487563 UCP1P25874 307 aa17.48■□□□□ 0.39
PLOD3-215ENST00000487563 ETV6P41212 452 aa17.48■□□□□ 0.39
PLOD3-215ENST00000487563 CMC4P56277 68 aaPredicted RBP17.48■□□□□ 0.39
PLOD3-215ENST00000487563 SSBP1Q04837 148 aaKnown RBP17.48■□□□□ 0.39
PLOD3-215ENST00000487563 MEF2DQ14814 521 aa17.48■□□□□ 0.39
PLOD3-215ENST00000487563 APRG1Q8IVJ8 170 aa17.48■□□□□ 0.39
PLOD3-215ENST00000487563 INS-IGF2F8WCM5 200 aa17.47■□□□□ 0.39
PLOD3-215ENST00000487563 PAFAH1B2P68402 229 aa17.47■□□□□ 0.39
PLOD3-215ENST00000487563 PMS2P11Q13670 270 aa17.47■□□□□ 0.39
PLOD3-215ENST00000487563 FAAP20Q6NZ36 180 aa17.47■□□□□ 0.39
PLOD3-215ENST00000487563 TOMM20LQ6UXN7 152 aa17.47■□□□□ 0.39
PLOD3-215ENST00000487563 ZNF600Q6ZNG1 722 aa17.47■□□□□ 0.39
PLOD3-215ENST00000487563 LYG2Q86SG7 212 aa17.47■□□□□ 0.39
PLOD3-215ENST00000487563 WFDC3Q8IUB2 231 aa17.47■□□□□ 0.39
PLOD3-215ENST00000487563 GBGT1Q8N5D6 347 aa17.47■□□□□ 0.39
PLOD3-215ENST00000487563 TEX13DA0A0J9YY54 714 aaPredicted RBP17.46■□□□□ 0.39
PLOD3-215ENST00000487563 DISC1C4P0D8 188 aa17.46■□□□□ 0.39
PLOD3-215ENST00000487563 RNASE2P10153 161 aaKnown RBP17.46■□□□□ 0.39
PLOD3-215ENST00000487563 SPCS2Q15005 226 aa17.46■□□□□ 0.39
PLOD3-215ENST00000487563 TCF24Q7RTU0 167 aa17.46■□□□□ 0.39
PLOD3-215ENST00000487563 PUS1Q9Y606 427 aaKnown RBP eCLIP17.46■□□□□ 0.39
PLOD3-215ENST00000487563 A0A0G2JRQ6 117 aa17.45■□□□□ 0.38
PLOD3-215ENST00000487563 CTDSP2O14595 271 aa17.45■□□□□ 0.38
PLOD3-215ENST00000487563 SCGB2A1O75556 95 aa17.45■□□□□ 0.38
PLOD3-215ENST00000487563 CD5P06127 495 aa17.45■□□□□ 0.38
PLOD3-215ENST00000487563 OPRK1P41145 380 aa17.45■□□□□ 0.38
PLOD3-215ENST00000487563 ALDH3B2P48448 385 aa17.45■□□□□ 0.38
PLOD3-215ENST00000487563 RNF183Q96D59 192 aa17.45■□□□□ 0.38
PLOD3-215ENST00000487563 MAP6D1Q9H9H5 199 aa17.45■□□□□ 0.38
PLOD3-215ENST00000487563 OR5AC1P0C628 307 aa17.44■□□□□ 0.38
PLOD3-215ENST00000487563 TNFRSF9Q07011 255 aa17.44■□□□□ 0.38
PLOD3-215ENST00000487563 IL18Q14116 193 aa17.44■□□□□ 0.38
PLOD3-215ENST00000487563 CLVS1Q8IUQ0 354 aaPredicted RBP17.44■□□□□ 0.38
PLOD3-215ENST00000487563 FAM219AQ8IW50 185 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms