RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 MISP3Q96FF7 219 aa14.15□□□□□ -0.14
SMPDL3A-202ENST00000487215 ZNF2Q9BSG1 426 aaPredicted RBP14.15□□□□□ -0.14
SMPDL3A-202ENST00000487215 HRH4Q9H3N8 390 aa14.15□□□□□ -0.14
SMPDL3A-202ENST00000487215 PRNDQ9UKY0 176 aa14.15□□□□□ -0.14
SMPDL3A-202ENST00000487215 DNAH17Q9UFH2 4485 aa14.15□□□□□ -0.14
SMPDL3A-202ENST00000487215 DYNC1H1Q14204 4646 aaKnown RBP14.14□□□□□ -0.15
SMPDL3A-202ENST00000487215 DEFB131AP59861 70 aa14.14□□□□□ -0.15
SMPDL3A-202ENST00000487215 LINC00336Q6ZUF6 198 aa14.14□□□□□ -0.15
SMPDL3A-202ENST00000487215 SAMD12Q8N8I0 201 aa14.14□□□□□ -0.15
SMPDL3A-202ENST00000487215 OR6F1Q8NGZ6 308 aa14.14□□□□□ -0.15
SMPDL3A-202ENST00000487215 ST8SIA2Q92186 375 aa14.14□□□□□ -0.15
SMPDL3A-202ENST00000487215 TXN2Q99757 166 aa14.14□□□□□ -0.15
SMPDL3A-202ENST00000487215 FKBP11Q9NYL4 201 aa14.14□□□□□ -0.15
SMPDL3A-202ENST00000487215 ANAPC10Q9UM13 185 aa14.14□□□□□ -0.15
SMPDL3A-202ENST00000487215 A0A1B0GVY2 172 aa14.13□□□□□ -0.15
SMPDL3A-202ENST00000487215 DFFBO76075 338 aa14.13□□□□□ -0.15
SMPDL3A-202ENST00000487215 IGHV3-48P01763 117 aa14.13□□□□□ -0.15
SMPDL3A-202ENST00000487215 APOHP02749 345 aaPredicted RBP14.13□□□□□ -0.15
SMPDL3A-202ENST00000487215 RBMY1A1P0DJD3 496 aaKnown RBP14.13□□□□□ -0.15
SMPDL3A-202ENST00000487215 RBMY1CP0DJD4 496 aa14.13□□□□□ -0.15
SMPDL3A-202ENST00000487215 NAT1P18440 290 aa14.13□□□□□ -0.15
SMPDL3A-202ENST00000487215 PRSS3P35030 304 aa14.13□□□□□ -0.15
SMPDL3A-202ENST00000487215 RFX2P48378 723 aa14.13□□□□□ -0.15
SMPDL3A-202ENST00000487215 RBMY1FQ15415 496 aaKnown RBP14.13□□□□□ -0.15
SMPDL3A-202ENST00000487215 LPCAT3Q6P1A2 487 aa14.13□□□□□ -0.15
SMPDL3A-202ENST00000487215 LILRB2Q8N423 598 aa14.13□□□□□ -0.15
SMPDL3A-202ENST00000487215 FAM24BQ8N5W8 94 aa14.13□□□□□ -0.15
SMPDL3A-202ENST00000487215 MS4A6AQ9H2W1 248 aa14.13□□□□□ -0.15
SMPDL3A-202ENST00000487215 VSIRQ9H7M9 311 aa14.13□□□□□ -0.15
SMPDL3A-202ENST00000487215 TMEM14BQ9NUH8 114 aa14.13□□□□□ -0.15
SMPDL3A-202ENST00000487215 IGHV4-28A0A0C4DH34 117 aa14.12□□□□□ -0.15
SMPDL3A-202ENST00000487215 SMIM31A0A1B0GVY4 71 aa14.12□□□□□ -0.15
SMPDL3A-202ENST00000487215 GPR31O00270 319 aa14.12□□□□□ -0.15
SMPDL3A-202ENST00000487215 ST8SIA3O43173 380 aa14.12□□□□□ -0.15
SMPDL3A-202ENST00000487215 MT-CO2P00403 227 aa14.12□□□□□ -0.15
SMPDL3A-202ENST00000487215 PMP2P02689 132 aa14.12□□□□□ -0.15
SMPDL3A-202ENST00000487215 CD5P06127 495 aa14.12□□□□□ -0.15
SMPDL3A-202ENST00000487215 EIF4EP06730 217 aaKnown RBP14.12□□□□□ -0.15
SMPDL3A-202ENST00000487215 HLA-DMBP28068 263 aa14.12□□□□□ -0.15
SMPDL3A-202ENST00000487215 RPS19P39019 145 aaKnown RBP14.12□□□□□ -0.15
SMPDL3A-202ENST00000487215 TAS2R20P59543 309 aa14.12□□□□□ -0.15
SMPDL3A-202ENST00000487215 TOMM20LQ6UXN7 152 aa14.12□□□□□ -0.15
SMPDL3A-202ENST00000487215 TSC22D3Q99576 134 aa14.12□□□□□ -0.15
SMPDL3A-202ENST00000487215 GINS3Q9BRX5 216 aa14.12□□□□□ -0.15
SMPDL3A-202ENST00000487215 PKHD1P08F94 4074 aa14.11□□□□□ -0.15
SMPDL3A-202ENST00000487215 A0A087WXM4 84 aa14.11□□□□□ -0.15
SMPDL3A-202ENST00000487215 DNASE2O00115 360 aaPredicted RBP14.11□□□□□ -0.15
SMPDL3A-202ENST00000487215 GNG7O60262 68 aa14.11□□□□□ -0.15
SMPDL3A-202ENST00000487215 GIG44P09565 113 aaPredicted RBP14.11□□□□□ -0.15
SMPDL3A-202ENST00000487215 Q6ZTC4 211 aa14.11□□□□□ -0.15
SMPDL3A-202ENST00000487215 FAM212BQ9NTI7 297 aaPredicted RBP14.11□□□□□ -0.15
SMPDL3A-202ENST00000487215 DNAH11Q96DT5 4516 aa14.11□□□□□ -0.15
SMPDL3A-202ENST00000487215 ABCA13Q86UQ4 5058 aa14.1□□□□□ -0.15
SMPDL3A-202ENST00000487215 IGHV4-4A0A075B6R2 117 aa14.1□□□□□ -0.15
SMPDL3A-202ENST00000487215 TRAV2A0A0B4J234 112 aa14.1□□□□□ -0.15
SMPDL3A-202ENST00000487215 TRAV10A0A0B4J240 114 aa14.1□□□□□ -0.15
SMPDL3A-202ENST00000487215 IGHV3-66A0A0C4DH42 116 aa14.1□□□□□ -0.15
SMPDL3A-202ENST00000487215 STHQ8IWL8 128 aa14.1□□□□□ -0.15
SMPDL3A-202ENST00000487215 ZNF114Q8NC26 417 aa14.1□□□□□ -0.15
SMPDL3A-202ENST00000487215 PINX1Q96BK5 328 aaKnown RBP14.1□□□□□ -0.15
SMPDL3A-202ENST00000487215 YIPF6Q96EC8 236 aa14.1□□□□□ -0.15
SMPDL3A-202ENST00000487215 FXYD6Q9H0Q3 95 aa14.1□□□□□ -0.15
SMPDL3A-202ENST00000487215 MIFP14174 115 aa14.09□□□□□ -0.15
SMPDL3A-202ENST00000487215 TSPAN5P62079 268 aa14.09□□□□□ -0.15
SMPDL3A-202ENST00000487215 RPL11P62913 178 aaKnown RBP14.09□□□□□ -0.15
SMPDL3A-202ENST00000487215 TRPT1Q86TN4 253 aaKnown RBP14.09□□□□□ -0.15
SMPDL3A-202ENST00000487215 ZFAND3Q9H8U3 227 aa14.09□□□□□ -0.15
SMPDL3A-202ENST00000487215 SCPEP1Q9HB40 452 aa14.09□□□□□ -0.15
SMPDL3A-202ENST00000487215 TNFAIP8O95379 198 aa14.08□□□□□ -0.16
SMPDL3A-202ENST00000487215 MED14OSP0DP75 135 aa14.08□□□□□ -0.16
SMPDL3A-202ENST00000487215 HRH1P35367 487 aa14.08□□□□□ -0.16
SMPDL3A-202ENST00000487215 LSM3P62310 102 aaKnown RBP14.08□□□□□ -0.16
SMPDL3A-202ENST00000487215 DUSP18Q8NEJ0 188 aa14.08□□□□□ -0.16
SMPDL3A-202ENST00000487215 RABAC1Q9UI14 185 aa14.08□□□□□ -0.16
SMPDL3A-202ENST00000487215 X6R8D5 127 aa14.08□□□□□ -0.16
SMPDL3A-202ENST00000487215 ELOA3CA0A087WX78 387 aaPredicted RBP14.07□□□□□ -0.16
SMPDL3A-202ENST00000487215 ZNF705EA8MWA4 302 aaPredicted RBP14.07□□□□□ -0.16
SMPDL3A-202ENST00000487215 APOA1P02647 267 aa14.07□□□□□ -0.16
SMPDL3A-202ENST00000487215 C4BPBP20851 252 aa14.07□□□□□ -0.16
SMPDL3A-202ENST00000487215 HLA-DMAP28067 261 aa14.07□□□□□ -0.16
SMPDL3A-202ENST00000487215 TGFBR1P36897 503 aa14.07□□□□□ -0.16
SMPDL3A-202ENST00000487215 PRCDQ00LT1 54 aa14.07□□□□□ -0.16
SMPDL3A-202ENST00000487215 TMEM41BQ5BJD5 291 aa14.07□□□□□ -0.16
SMPDL3A-202ENST00000487215 GPX8Q8TED1 209 aa14.07□□□□□ -0.16
SMPDL3A-202ENST00000487215 PUS1Q9Y606 427 aaKnown RBP eCLIP14.07□□□□□ -0.16
SMPDL3A-202ENST00000487215 SPP1P10451 314 aa14.06□□□□□ -0.16
SMPDL3A-202ENST00000487215 PHLDA2Q53GA4 152 aa14.06□□□□□ -0.16
SMPDL3A-202ENST00000487215 PVRIGQ6DKI7 326 aa14.06□□□□□ -0.16
SMPDL3A-202ENST00000487215 MORN3Q6PF18 240 aaPredicted RBP14.06□□□□□ -0.16
SMPDL3A-202ENST00000487215 ZNF600Q6ZNG1 722 aa14.06□□□□□ -0.16
SMPDL3A-202ENST00000487215 LYSMD2Q8IV50 215 aa14.06□□□□□ -0.16
SMPDL3A-202ENST00000487215 OR4A16Q8NH70 328 aa14.06□□□□□ -0.16
SMPDL3A-202ENST00000487215 SEC22AQ96IW7 307 aa14.06□□□□□ -0.16
SMPDL3A-202ENST00000487215 RNF126Q9BV68 326 aa14.06□□□□□ -0.16
SMPDL3A-202ENST00000487215 A0A1B0GU03 582 aa14.05□□□□□ -0.16
SMPDL3A-202ENST00000487215 IGKV1-39P01597 117 aa14.05□□□□□ -0.16
SMPDL3A-202ENST00000487215 IGKV1D-39P04432 117 aa14.05□□□□□ -0.16
SMPDL3A-202ENST00000487215 RCVRNP35243 200 aa14.05□□□□□ -0.16
SMPDL3A-202ENST00000487215 NPBWR1P48145 328 aa14.05□□□□□ -0.16
SMPDL3A-202ENST00000487215 UCP3P55916 312 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms