RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 KIR3DS1Q14943 382 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 TCF24Q7RTU0 167 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 WDR31Q8NA23 367 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 RNF138Q8WVD3 245 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 CACNA1GO43497 2377 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 A1L4Q6 167 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 LINC00473A8K010 186 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 P01737 135 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 CD46P15529 392 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 TRIP6Q15654 476 aaKnown RBP5.15□□□□□ -1.58
VPS13D-209ENST00000487188 PRSS3P2Q8NHM4 247 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 CT55Q8WUE5 264 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 FAM168AQ92567 244 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 PERPQ96FX8 193 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 SGK494Q96LW2 274 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 SCRT2Q9NQ03 307 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 COL5A1P20908 1838 aaPredicted RBP5.15□□□□□ -1.58
VPS13D-209ENST00000487188 LRP4O75096 1905 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 DOCK7Q96N67 2140 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 FER1L5A0AVI2 2057 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 PPIAL4CA0A0B4J2A2 164 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 A8MWL6 223 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 GGTLC3B5MD39 225 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 H3BRM9 83 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 CYC1P08574 325 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 PPIAL4GP0DN37 164 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 AZU1P20160 251 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 CFHR1Q03591 330 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 TM4SF20Q53R12 229 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 SPATA12Q7Z6I5 190 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 VSTM2AQ8TAG5 236 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 C5orf30Q96GV9 206 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 ZNF257Q9Y2Q1 563 aa5.15□□□□□ -1.58
VPS13D-209ENST00000487188 IGLV3-12A0A075B6K2 115 aa5.15□□□□□ -1.59
VPS13D-209ENST00000487188 PEX7O00628 323 aa5.15□□□□□ -1.59
VPS13D-209ENST00000487188 GFRA3O60609 400 aa5.15□□□□□ -1.59
VPS13D-209ENST00000487188 SRFP11831 508 aa5.15□□□□□ -1.59
VPS13D-209ENST00000487188 NMUP48645 174 aa5.15□□□□□ -1.59
VPS13D-209ENST00000487188 KRTAP27-1Q3LI81 207 aa5.15□□□□□ -1.59
VPS13D-209ENST00000487188 ATP5L2Q7Z4Y8 100 aa5.15□□□□□ -1.59
VPS13D-209ENST00000487188 TMEM116Q8NCL8 245 aa5.15□□□□□ -1.59
VPS13D-209ENST00000487188 WIPF2Q8TF74 440 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-209ENST00000487188 LINC00479Q96M42 142 aa5.15□□□□□ -1.59
VPS13D-209ENST00000487188 F11RQ9Y624 299 aaKnown RBP5.15□□□□□ -1.59
VPS13D-209ENST00000487188 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.14□□□□□ -1.59
VPS13D-209ENST00000487188 SP1P08047 785 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 P0C879 139 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 COX8AP10176 69 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 HSD52Q0P140 79 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 HES3Q5TGS1 186 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 C16orf54Q6UWD8 224 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 COLCA1Q6ZS62 124 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 Q8N7P7 452 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 RBMXL3Q8N7X1 1067 aaKnown RBP5.14□□□□□ -1.59
VPS13D-209ENST00000487188 OR10W1Q8NGF6 305 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 MAFAQ8NHW3 353 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-209ENST00000487188 PAXXQ9BUH6 204 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 TPPP3Q9BW30 176 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 FSCN3Q9NQT6 498 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 MBNL3Q9NUK0 354 aaKnown RBP5.14□□□□□ -1.59
VPS13D-209ENST00000487188 ZNF835Q9Y2P0 537 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 MED12LQ86YW9 2145 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 EML6Q6ZMW3 1958 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 A0A0G2JMM0 328 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 A0A1W2PPB8 328 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 KIR3DP1A8MWS1 328 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 ADH4P08319 380 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 GCSHP23434 173 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 CD24P25063 80 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 ZNF138P52744 262 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 TBC1D28Q2M2D7 210 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 TMEM177Q53S58 311 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 BLNKQ8WV28 456 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 POM121L2Q96KW2 1035 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 COL25A1Q9BXS0 654 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-209ENST00000487188 PILRBQ9UKJ0 227 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 EXPH5Q8NEV8 1989 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 M0R296 226 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 OR2J3O76001 311 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 MT-CO3P00414 261 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 HOXC12P31275 282 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 CKS1BP61024 79 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 H1FXQ92522 213 aaKnown RBP5.14□□□□□ -1.59
VPS13D-209ENST00000487188 ATP6V0BQ99437 205 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 C12orf49Q9H741 205 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 AP5S1Q9NUS5 200 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 MAP1BP46821 2468 aaKnown RBP5.14□□□□□ -1.59
VPS13D-209ENST00000487188 TRAV3A0A0B4J244 114 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 REG1BP48304 166 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 HSPE1P61604 102 aaKnown RBP5.14□□□□□ -1.59
VPS13D-209ENST00000487188 TUSC5Q8IXB3 177 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 OR4A5Q8NH83 315 aa5.14□□□□□ -1.59
VPS13D-209ENST00000487188 RPP21Q9H633 154 aaKnown RBP5.14□□□□□ -1.59
VPS13D-209ENST00000487188 APOHP02749 345 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-209ENST00000487188 FTH1P19P0C7X4 201 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 SMIM17P0DL12 118 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 KIR2DS2P43631 304 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 VDAC2P45880 294 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-209ENST00000487188 FOXF2Q12947 444 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 PCOLCEQ15113 449 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms