RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 MIC13Q5XKP0 118 aa5.71□□□□□ -1.5
SMARCAL1-212ENST00000486983 STPG3Q8N7X2 389 aa5.71□□□□□ -1.5
SMARCAL1-212ENST00000486983 OR9G1Q8NH87 305 aa5.71□□□□□ -1.5
SMARCAL1-212ENST00000486983 RNASEH2CQ8TDP1 164 aaKnown RBP5.71□□□□□ -1.5
SMARCAL1-212ENST00000486983 C11orf52Q96A22 123 aa5.71□□□□□ -1.5
SMARCAL1-212ENST00000486983 FLYWCH2Q96CP2 140 aaKnown RBP5.71□□□□□ -1.5
SMARCAL1-212ENST00000486983 HARBI1Q96MB7 349 aa5.71□□□□□ -1.5
SMARCAL1-212ENST00000486983 OR5B12Q96R08 314 aa5.71□□□□□ -1.5
SMARCAL1-212ENST00000486983 RNF2Q99496 336 aa5.71□□□□□ -1.5
SMARCAL1-212ENST00000486983 NABP2Q9BQ15 211 aa5.71□□□□□ -1.5
SMARCAL1-212ENST00000486983 MRPL20Q9BYC9 149 aaKnown RBP5.71□□□□□ -1.5
SMARCAL1-212ENST00000486983 NDUFA4L2Q9NRX3 87 aa5.71□□□□□ -1.5
SMARCAL1-212ENST00000486983 CTSZQ9UBR2 303 aa5.71□□□□□ -1.5
SMARCAL1-212ENST00000486983 SLC45A2Q9UMX9 530 aa5.71□□□□□ -1.5
SMARCAL1-212ENST00000486983 LY96Q9Y6Y9 160 aa5.71□□□□□ -1.5
SMARCAL1-212ENST00000486983 URGCP-MRPS24S4R325 110 aa5.71□□□□□ -1.5
SMARCAL1-212ENST00000486983 X6R8D5 127 aa5.71□□□□□ -1.5
SMARCAL1-212ENST00000486983 CHD6Q8TD26 2715 aa5.71□□□□□ -1.5
SMARCAL1-212ENST00000486983 SRRM4A7MD48 611 aaKnown RBP5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 C9JCJ5 164 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 DVL1O14640 695 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 HMGB3O15347 200 aaKnown RBP5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 HIST1H2BKO60814 126 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 GGCTO75223 188 aaKnown RBP5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 HIST1H2BJP06899 126 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 IGHV1-8P0DP01 117 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 RNASE2P10153 161 aaKnown RBP5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 CCL3L1P16619 93 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 HIST1H2BOP23527 126 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 NPPCP23582 126 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 GCHFRP30047 84 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 HIST1H2BBP33778 126 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 GALR1P47211 349 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 LGALS7P47929 136 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 PPOXP50336 477 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 HIST1H2BDP58876 126 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 HIST1H2BCP62807 126 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 GNB1P62873 340 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 RPL8P62917 257 aaKnown RBP5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 ERHP84090 104 aaKnown RBP5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 CD69Q07108 199 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 HIST2H2BEQ16778 126 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 HLA-DRB5Q30154 266 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 VMA21Q3ZAQ7 101 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 PRR30Q53SZ7 412 aaPredicted RBP5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 GCSAMLQ5JQS6 135 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 DNLZQ5SXM8 178 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 PVRIGQ6DKI7 326 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 KCNIP4Q6PIL6 250 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 PQLC2Q6ZP29 291 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 C16orf82Q7Z2V1 217 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 LINC01551Q86U37 167 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 IQCF2Q8IXL9 164 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 ST6GALNAC3Q8NDV1 305 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 NUDT10Q8NFP7 164 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 OR51G1Q8NGK1 321 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 OR10X1Q8NGY0 326 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 GATAD1Q8WUU5 269 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 CCL17Q92583 94 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 HIST1H2BHQ93079 126 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 NUDT11Q96G61 164 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 HIST1H2BNQ99877 126 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 HIST1H2BMQ99879 126 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 MRPL32Q9BYC8 188 aaKnown RBP5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 COMMD5Q9GZQ3 224 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 TMEM167BQ9NRX6 74 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 FUT9Q9Y231 359 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 WASHC3Q9Y3C0 194 aa5.7□□□□□ -1.5
SMARCAL1-212ENST00000486983 IGF2RP11717 2491 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 BSNQ9UPA5 3926 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 TRAV9-1A0A075B6T8 112 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 PPP5D1E7EU14 171 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 TRGC2P03986 189 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 OR5G3P0C626 314 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 LINC00869P0C866 280 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 IGFBP2P18065 325 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 ATP5G3P48201 142 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 SUB1P53999 127 aaKnown RBP eCLIP5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 TAS2R45P59539 299 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 RPL11P62913 178 aaKnown RBP5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 PAX2Q02962 417 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 KLRB1Q12918 225 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 LYPD2Q6UXB3 125 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 SLC16A13Q7RTY0 426 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 TGIF2LXQ8IUE1 241 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 ZNF114Q8NC26 417 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 BEND2Q8NDZ0 799 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 OR4P4Q8NGL7 312 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 C8orf46Q8TAG6 207 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 ABHD5Q8WTS1 349 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 SSMEM1Q8WWF3 244 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 H1FXQ92522 213 aaKnown RBP5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 UHRF2Q96PU4 802 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 TMEM133Q9H2Q1 129 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 PATZ1Q9HBE1 687 aaKnown RBP5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 TECRQ9NZ01 308 aaKnown RBP5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 SH3BGRL2Q9UJC5 107 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 FBXL7Q9UJT9 491 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms