RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 TMEM140Q9NV12 185 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 DUSP13Q9UII6 198 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 BRWD1Q9NSI6 2320 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 A0A1W2PRE2 83 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 PINLYPA6NC86 204 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 KLF7O75840 302 aaPredicted RBP8.72□□□□□ -1.01
CCDC171-208ENST00000486641 HLA-DRB1P01911 266 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 GPR12P47775 334 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 FAM231DQ6ZW35 169 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 MOB3BQ86TA1 216 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 CXorf67Q86X51 503 aaPredicted RBP8.72□□□□□ -1.01
CCDC171-208ENST00000486641 OR4S2Q8NH73 311 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 IDI2-AS1Q9NZ38 188 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 DOCK7Q96N67 2140 aa8.72□□□□□ -1.01
CCDC171-208ENST00000486641 IGKV1OR2-108A0A075B7D4 117 aa8.71□□□□□ -1.01
CCDC171-208ENST00000486641 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.71□□□□□ -1.01
CCDC171-208ENST00000486641 TRGV8A0A0C4DH27 118 aa8.71□□□□□ -1.01
CCDC171-208ENST00000486641 SNAI2O43623 268 aa8.71□□□□□ -1.01
CCDC171-208ENST00000486641 ERVK-16P61578 105 aa8.71□□□□□ -1.01
CCDC171-208ENST00000486641 ZNF826PQ6ZT77 177 aa8.71□□□□□ -1.01
CCDC171-208ENST00000486641 SSX8Q7RTT4 187 aa8.71□□□□□ -1.01
CCDC171-208ENST00000486641 METRNQ9UJH8 293 aa8.71□□□□□ -1.01
CCDC171-208ENST00000486641 A0A1B0GXF2 115 aa8.71□□□□□ -1.02
CCDC171-208ENST00000486641 PPIAL4DF5H284 164 aa8.71□□□□□ -1.02
CCDC171-208ENST00000486641 H0Y8G0 127 aa8.71□□□□□ -1.02
CCDC171-208ENST00000486641 CYC1P08574 325 aa8.71□□□□□ -1.02
CCDC171-208ENST00000486641 MYOD1P15172 320 aa8.71□□□□□ -1.02
CCDC171-208ENST00000486641 ARF6P62330 175 aa8.71□□□□□ -1.02
CCDC171-208ENST00000486641 RPL39P5Q59GN2 51 aa8.71□□□□□ -1.02
CCDC171-208ENST00000486641 RNFT1Q5M7Z0 435 aa8.71□□□□□ -1.02
CCDC171-208ENST00000486641 C2orf91Q6ZV80 131 aa8.71□□□□□ -1.02
CCDC171-208ENST00000486641 PMCHL2Q9BQD1 86 aa8.71□□□□□ -1.02
CCDC171-208ENST00000486641 CEP192Q8TEP8 1941 aa8.71□□□□□ -1.02
CCDC171-208ENST00000486641 TMEM265A0A087WTH1 108 aa8.7□□□□□ -1.02
CCDC171-208ENST00000486641 TRAV5A0A0B4J249 113 aa8.7□□□□□ -1.02
CCDC171-208ENST00000486641 IGHV3-13P01766 116 aa8.7□□□□□ -1.02
CCDC171-208ENST00000486641 IGHV3-7P01780 117 aa8.7□□□□□ -1.02
CCDC171-208ENST00000486641 C5orf17Q8NAS9 161 aa8.7□□□□□ -1.02
CCDC171-208ENST00000486641 CT55Q8WUE5 264 aa8.7□□□□□ -1.02
CCDC171-208ENST00000486641 CHCHD1Q96BP2 118 aaKnown RBP8.7□□□□□ -1.02
CCDC171-208ENST00000486641 MS4A6AQ9H2W1 248 aa8.7□□□□□ -1.02
CCDC171-208ENST00000486641 SMPD2O60906 423 aa8.7□□□□□ -1.02
CCDC171-208ENST00000486641 CER1O95813 267 aa8.7□□□□□ -1.02
CCDC171-208ENST00000486641 LGALS7P47929 136 aa8.7□□□□□ -1.02
CCDC171-208ENST00000486641 TAS2R45P59539 299 aa8.7□□□□□ -1.02
CCDC171-208ENST00000486641 PLGLB1Q02325 96 aa8.7□□□□□ -1.02
CCDC171-208ENST00000486641 FAM162BQ5T6X4 162 aa8.7□□□□□ -1.02
CCDC171-208ENST00000486641 MORN5Q5VZ52 161 aa8.7□□□□□ -1.02
CCDC171-208ENST00000486641 TCF24Q7RTU0 167 aa8.7□□□□□ -1.02
CCDC171-208ENST00000486641 SLC25A33Q9BSK2 321 aa8.7□□□□□ -1.02
CCDC171-208ENST00000486641 AMMECR1Q9Y4X0 333 aaPredicted RBP8.7□□□□□ -1.02
CCDC171-208ENST00000486641 C15orf61A6NNL5 157 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 C15orf65H3BRN8 121 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 SP9P0CG40 484 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 C8orf88P0DMB2 117 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 SRFP11831 508 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 HTR1DP28221 377 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 UQCRFS1P47985 274 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 ZNF138P52744 262 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 MLANAQ16655 118 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 TMEM97Q5BJF2 176 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 PET117Q6UWS5 81 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 GTF2H5Q6ZYL4 71 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 SVIPQ8NHG7 77 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 JMJD8Q96S16 334 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 HINT2Q9BX68 163 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 MAP1LC3CQ9BXW4 147 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 CELSR3Q9NYQ7 3312 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 C2CD4DB7Z1M9 353 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 TNFSF15O95150 251 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 GOSR1O95249 250 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 APOA2P02652 100 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 COX8AP10176 69 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 HSPE1P61604 102 aaKnown RBP8.69□□□□□ -1.02
CCDC171-208ENST00000486641 RTL8BQ17RB0 113 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 C1orf229Q6ZS94 237 aaPredicted RBP8.69□□□□□ -1.02
CCDC171-208ENST00000486641 ATP5L2Q7Z4Y8 100 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 MDP1Q86V88 176 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 C11orf53Q8IXP5 236 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 OR1N2Q8NGR9 330 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 TMEM186Q96B77 213 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 S1PR3Q99500 378 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 ENY2Q9NPA8 101 aa8.69□□□□□ -1.02
CCDC171-208ENST00000486641 PRUNE2Q8WUY3 3088 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 C9orf118A6NHY6 69 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 SPINT2O43291 252 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 ADH4P08319 380 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 CELA3AP09093 270 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 ZNF134P52741 427 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 RBPJQ06330 500 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 NEGR1Q7Z3B1 354 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 H1FXQ92522 213 aaKnown RBP8.68□□□□□ -1.02
CCDC171-208ENST00000486641 FAM167A-AS1Q96KT0 104 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 NAA38Q9BRA0 125 aaKnown RBP8.68□□□□□ -1.02
CCDC171-208ENST00000486641 SLC25A2Q9BXI2 301 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 HIST1H1EP10412 219 aaKnown RBP8.68□□□□□ -1.02
CCDC171-208ENST00000486641 APOBEC3AP31941 199 aaPredicted RBP8.68□□□□□ -1.02
CCDC171-208ENST00000486641 SEC11AP67812 179 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 UBE2L3P68036 154 aaKnown RBP8.68□□□□□ -1.02
CCDC171-208ENST00000486641 HBBP68871 147 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms