RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 GLYATL2Q8WU03 294 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 MRGPRFQ96AM1 343 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 GALNT14Q96FL9 552 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 SCGB3A2Q96PL1 93 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 TP53RKQ96S44 253 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 RTBDNQ9BSG5 229 aaPredicted RBP5.28□□□□□ -1.56
VPS50-218ENST00000485994 ZMAT4Q9H898 229 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 NDUFA13Q9P0J0 144 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 COPZ2Q9P299 210 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 NSG2Q9Y328 171 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 UFC1Q9Y3C8 167 aa5.28□□□□□ -1.56
VPS50-218ENST00000485994 KMT2CQ8NEZ4 4911 aaKnown RBP5.28□□□□□ -1.56
VPS50-218ENST00000485994 FABP12A6NFH5 140 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 DBX1A6NMT0 343 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 I3L2K1 104 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 TGOLN2O43493 480 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 IGKV1-5P01602 117 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 TNFSF8P32971 234 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 MFAP4P55083 255 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 IL18Q14116 193 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 ANKRD55Q3KP44 614 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 ZNF57Q68EA5 555 aaPredicted RBP5.27□□□□□ -1.57
VPS50-218ENST00000485994 HAPLN4Q86UW8 402 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 UXS1Q8NBZ7 420 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 OR13C8Q8NGS7 320 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 MARCH1Q8TCQ1 289 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 IL22RA2Q969J5 263 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 OR10C1Q96KK4 312 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 ASCL2Q99929 193 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 PRRT1Q99946 306 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 FAM110AQ9BQ89 295 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 TMEM222Q9H0R3 208 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 C5orf66Q9H5L9 145 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 C21orf62Q9NYP8 219 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 SCP2D1Q9UJQ7 156 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 KCNIP3Q9Y2W7 256 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 TMEM56-RWDD3S4R434 201 aa5.27□□□□□ -1.57
VPS50-218ENST00000485994 PIGBOS1A0A0B4J2F0 54 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 ZNF320A2RRD8 509 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 CCDC160A6NGH7 325 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 CRYM-AS1A6NIL9 109 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 C15orf62A8K5M9 175 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 CORTO00230 105 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 NOL3O60936 208 aaKnown RBP5.26□□□□□ -1.57
VPS50-218ENST00000485994 IGHV3-23P01764 117 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 CD5P06127 495 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 PI3P19957 117 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 GPR183P32249 361 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 ADMP35318 185 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 SUB1P53999 127 aaKnown RBP eCLIP5.26□□□□□ -1.57
VPS50-218ENST00000485994 RELQ04864 619 aaPredicted RBP5.26□□□□□ -1.57
VPS50-218ENST00000485994 ZNF124Q15973 351 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 HAGHQ16775 308 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 BSXQ3C1V8 233 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 SCGB2B2Q4G0G5 96 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 UNQ9165/PRO28630Q6UXU0 137 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 OR4C16Q8NGL9 310 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 MCFD2Q8NI22 146 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 DYNLRB2Q8TF09 96 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 TMEM190Q8WZ59 177 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 RRNAD1Q96FB5 475 aaKnown RBP5.26□□□□□ -1.57
VPS50-218ENST00000485994 RCHY1Q96PM5 261 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 CITED4Q96RK1 184 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 NEURL2Q9BR09 285 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 CHRDL1Q9BU40 450 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 HINT2Q9BX68 163 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 TUBA4BQ9H853 241 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 DAZ1Q9NQZ3 744 aaKnown RBP5.26□□□□□ -1.57
VPS50-218ENST00000485994 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.26□□□□□ -1.57
VPS50-218ENST00000485994 MLXQ9UH92 298 aa5.26□□□□□ -1.57
VPS50-218ENST00000485994 C14orf166Q9Y224 244 aaKnown RBP5.26□□□□□ -1.57
VPS50-218ENST00000485994 OR2T8A6NH00 312 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 TSPAN4O14817 238 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 NUPL2O15504 423 aaKnown RBP5.25□□□□□ -1.57
VPS50-218ENST00000485994 ST8SIA3O43173 380 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 TMEM50AO95807 157 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 CD7P09564 240 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 SNCAP37840 140 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 ETV6P41212 452 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 NPBWR1P48145 328 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 CMC4P56277 68 aaPredicted RBP5.25□□□□□ -1.57
VPS50-218ENST00000485994 ATP5IP56385 69 aaPredicted RBP5.25□□□□□ -1.57
VPS50-218ENST00000485994 AP3S2P59780 193 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 SPCS3P61009 180 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 SP6Q3SY56 376 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 TM4SF20Q53R12 229 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 RNASE12Q5GAN4 147 aaKnown RBP5.25□□□□□ -1.57
VPS50-218ENST00000485994 LAMTOR1Q6IAA8 161 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 Q6ZRM9 215 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 SLC16A13Q7RTY0 426 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 CCDC190Q86UF4 302 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 SELENOHQ8IZQ5 122 aaKnown RBP5.25□□□□□ -1.57
VPS50-218ENST00000485994 TMEM61Q8N0U2 210 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 OR51S1Q8NGJ8 323 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 RBPMSQ93062 196 aaKnown RBP5.25□□□□□ -1.57
VPS50-218ENST00000485994 ZNF414Q96IQ9 312 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 SPAG8Q99932 426 aaPredicted RBP5.25□□□□□ -1.57
VPS50-218ENST00000485994 SPATA25Q9BR10 227 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 C6orf62Q9GZU0 229 aaPredicted RBP5.25□□□□□ -1.57
VPS50-218ENST00000485994 NAA60Q9H7X0 242 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms