RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 GCSAMQ8N6F7 178 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 TMEM251Q8N6I4 163 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 SLC25A40Q8TBP6 338 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 CT55Q8WUE5 264 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 SSMEM1Q8WWF3 244 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 TMEM190Q8WZ59 177 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 BORCS7Q96B45 105 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 ADTRPQ96IZ2 230 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 ZNF714Q96N38 554 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 OR2V2Q96R30 315 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 S1PR3Q99500 378 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 ALKBH7Q9BT30 221 aaPredicted RBP3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 FAM103A1Q9BTL3 118 aaKnown RBP3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 CHRDL1Q9BU40 450 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 CLEC7AQ9BXN2 247 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 ST20Q9HBF5 79 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 RAB9BQ9NP90 201 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 IDI2-AS1Q9NZ38 188 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 ABI3Q9P2A4 366 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 PRNDQ9UKY0 176 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 ZNF257Q9Y2Q1 563 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 SOX21Q9Y651 276 aaPredicted RBP3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 C5orf42Q9H799 3197 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 KIAA0100Q14667 2235 aaKnown RBP3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 ASXL3Q9C0F0 2248 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 IGHV3-43A0A0B4J1X8 118 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 TRAV3A0A0B4J244 114 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 PATE3B3GLJ2 98 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 MGST3O14880 152 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 WNT9BO14905 357 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 HSBP1O75506 76 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 FOXH1O75593 365 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 GRPP07492 148 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 C8orf88P0DMB2 117 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 CGB3P0DN86 165 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 CGB7P0DN87 165 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 IGHV3-43DP0DP04 118 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 IGFBP2P18065 325 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 USF1P22415 310 aaPredicted RBP3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 CRYBB3P26998 211 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 CFHR2P36980 270 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 MPV17P39210 176 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 MEOX1P50221 254 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 TCL1AP56279 114 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 SRYQ05066 204 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 MZT1Q08AG7 82 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 SLAQ13239 276 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 PSG5Q15238 335 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 RNF151Q2KHN1 245 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 ALKBH6Q3KRA9 238 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 C2orf83Q53S99 150 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 CT83Q5H943 113 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 ABHD17BQ5VST6 288 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 MBNL2Q5VZF2 373 aaKnown RBP3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 SPINK14Q6IE38 97 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 OR4A47Q6IF82 309 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 MRPL54Q6P161 138 aaKnown RBP3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 EBLN2Q6P2I7 272 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 UNQ5815/PRO19632Q6UWF5 114 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 LYG1Q8N1E2 194 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 ABHD12Q8N2K0 398 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 CD177Q8N6Q3 437 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 MDS2Q8NDY4 140 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 C1orf162Q8NEQ5 155 aaPredicted RBP3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 PPP1R35Q8TAP8 253 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 KLF14Q8TD94 323 aaPredicted RBP3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 CHCHD1Q96BP2 118 aaKnown RBP3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 GRAMD2BQ96HH9 432 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 FAM167A-AS1Q96KT0 104 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 NABP2Q9BQ15 211 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 ZPBPQ9BS86 351 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 RNASE7Q9H1E1 156 aaKnown RBP3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 ENY2Q9NPA8 101 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 OBP2BQ9NPH6 170 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 ZNF331Q9NQX6 463 aaPredicted RBP3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 TNFRSF19Q9NS68 423 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 GNG12Q9UBI6 72 aa3.81□□□□□ -1.8
SMARCC1-206ENST00000485737 MED12Q93074 2177 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 ABCA7Q8IZY2 2146 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 LAMA3Q16787 3333 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 PTPRBP23467 1997 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 IGKV1OR2-108A0A075B7D4 117 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 A0A0G2JNJ9 132 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 SRRM5B3KS81 715 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 M0R2Z0 102 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 UPK2O00526 184 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 PEX7O00628 323 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 TAX1BP3O14907 124 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 CER1O95813 267 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 IGKV3-15P01624 115 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 HIST1H1EP10412 219 aaKnown RBP3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 IGLL1P15814 213 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 TNFRSF1AP19438 455 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 IGHV1-2P23083 117 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 MYCNOSP40205 109 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 CA7P43166 264 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 HINT1P49773 126 aaPredicted RBP3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 LINC00205P59089 165 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 ZXDAP98168 799 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 FXYD3Q14802 87 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms