RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 IGKV1D-43A0A0B4J1Z2 117 aa1.61□□□□□ -2.15
SMC4-215ENST00000484799 HMSDA8MTL9 139 aa1.61□□□□□ -2.15
SMC4-215ENST00000484799 E5RI56 91 aa1.61□□□□□ -2.15
SMC4-215ENST00000484799 PPBPP02775 128 aa1.61□□□□□ -2.15
SMC4-215ENST00000484799 P0DMU3 169 aa1.61□□□□□ -2.15
SMC4-215ENST00000484799 FAM231AP0DMU4 169 aa1.61□□□□□ -2.15
SMC4-215ENST00000484799 FAM231CP0DMU5 169 aa1.61□□□□□ -2.15
SMC4-215ENST00000484799 PEBP1P30086 187 aaKnown RBP1.61□□□□□ -2.15
SMC4-215ENST00000484799 POU6F1Q14863 301 aa1.61□□□□□ -2.15
SMC4-215ENST00000484799 TAF1AQ15573 450 aaPredicted RBP1.61□□□□□ -2.15
SMC4-215ENST00000484799 ZNF791Q3KP31 576 aaPredicted RBP1.61□□□□□ -2.15
SMC4-215ENST00000484799 KRTAP6-3Q3LI67 103 aa1.61□□□□□ -2.15
SMC4-215ENST00000484799 HACD4Q5VWC8 232 aa1.61□□□□□ -2.15
SMC4-215ENST00000484799 TRAPPC6BQ86SZ2 158 aa1.61□□□□□ -2.15
SMC4-215ENST00000484799 AP3S1Q92572 193 aa1.61□□□□□ -2.15
SMC4-215ENST00000484799 GPR146Q96CH1 333 aa1.61□□□□□ -2.15
SMC4-215ENST00000484799 C9orf16Q9BUW7 83 aa1.61□□□□□ -2.15
SMC4-215ENST00000484799 SLC39A9Q9NUM3 307 aa1.61□□□□□ -2.15
SMC4-215ENST00000484799 UQCC1Q9NVA1 299 aa1.61□□□□□ -2.15
SMC4-215ENST00000484799 TVP23BQ9NYZ1 205 aa1.61□□□□□ -2.15
SMC4-215ENST00000484799 GREB1Q4ZG55 1949 aa1.61□□□□□ -2.15
SMC4-215ENST00000484799 A0A0D9SEW6 157 aa1.6□□□□□ -2.15
SMC4-215ENST00000484799 A0A0G2JQZ4 141 aa1.6□□□□□ -2.15
SMC4-215ENST00000484799 MEIS3P1A6NDR6 274 aa1.6□□□□□ -2.15
SMC4-215ENST00000484799 OR51F1A6NGY5 319 aa1.6□□□□□ -2.15
SMC4-215ENST00000484799 ZNF860A6NHJ4 632 aa1.6□□□□□ -2.15
SMC4-215ENST00000484799 F8W036 122 aa1.6□□□□□ -2.15
SMC4-215ENST00000484799 NAPSAO96009 420 aa1.6□□□□□ -2.15
SMC4-215ENST00000484799 CYBAP13498 195 aa1.6□□□□□ -2.15
SMC4-215ENST00000484799 S100A4P26447 101 aaKnown RBP1.6□□□□□ -2.15
SMC4-215ENST00000484799 CASP1P29466 404 aa1.6□□□□□ -2.15
SMC4-215ENST00000484799 ERP29P30040 261 aaKnown RBP1.6□□□□□ -2.15
SMC4-215ENST00000484799 YPEL3P61236 119 aaPredicted RBP1.6□□□□□ -2.15
SMC4-215ENST00000484799 HSPE1P61604 102 aaKnown RBP1.6□□□□□ -2.15
SMC4-215ENST00000484799 RPL19P84098 196 aaKnown RBP1.6□□□□□ -2.15
SMC4-215ENST00000484799 FAM27BQ5VT28 67 aa1.6□□□□□ -2.15
SMC4-215ENST00000484799 Q6Q795 121 aa1.6□□□□□ -2.15
SMC4-215ENST00000484799 MIR17HGQ75NE6 70 aa1.6□□□□□ -2.15
SMC4-215ENST00000484799 TMEM106AQ96A25 262 aa1.6□□□□□ -2.15
SMC4-215ENST00000484799 RNASE7Q9H1E1 156 aaKnown RBP1.6□□□□□ -2.15
SMC4-215ENST00000484799 CYSLTR1Q9Y271 337 aa1.6□□□□□ -2.15
SMC4-215ENST00000484799 ERGIC3Q9Y282 383 aa1.6□□□□□ -2.15
SMC4-215ENST00000484799 DENND4BO75064 1496 aaPredicted RBP1.6□□□□□ -2.15
SMC4-215ENST00000484799 SCAF11Q99590 1463 aaKnown RBP1.6□□□□□ -2.15
SMC4-215ENST00000484799 STRCP1A6NGW2 1772 aa1.59□□□□□ -2.15
SMC4-215ENST00000484799 A0A0D9SG52 128 aa1.59□□□□□ -2.15
SMC4-215ENST00000484799 OR2J2O76002 312 aa1.59□□□□□ -2.15
SMC4-215ENST00000484799 EIF2B2P49770 351 aaKnown RBP1.59□□□□□ -2.15
SMC4-215ENST00000484799 KRR1Q13601 381 aaKnown RBP1.59□□□□□ -2.15
SMC4-215ENST00000484799 LYRM7Q5U5X0 104 aa1.59□□□□□ -2.15
SMC4-215ENST00000484799 GOLT1AQ6ZVE7 132 aa1.59□□□□□ -2.15
SMC4-215ENST00000484799 DEFB128Q7Z7B8 93 aa1.59□□□□□ -2.15
SMC4-215ENST00000484799 HIST3H2BBQ8N257 126 aa1.59□□□□□ -2.15
SMC4-215ENST00000484799 C10orf126Q8N4M7 172 aa1.59□□□□□ -2.15
SMC4-215ENST00000484799 TERB2Q8NHR7 220 aa1.59□□□□□ -2.15
SMC4-215ENST00000484799 PFN4Q8NHR9 129 aa1.59□□□□□ -2.15
SMC4-215ENST00000484799 TIMM21Q9BVV7 248 aa1.59□□□□□ -2.15
SMC4-215ENST00000484799 CKLFQ9UBR5 152 aa1.59□□□□□ -2.15
SMC4-215ENST00000484799 TP73-AS1Q9UF72 201 aa1.59□□□□□ -2.15
SMC4-215ENST00000484799 PYCARDQ9ULZ3 195 aa1.59□□□□□ -2.15
SMC4-215ENST00000484799 ADGRB3O60242 1522 aa1.59□□□□□ -2.16
SMC4-215ENST00000484799 DISP1Q96F81 1524 aa1.59□□□□□ -2.16
SMC4-215ENST00000484799 PTPRBP23467 1997 aa1.59□□□□□ -2.16
SMC4-215ENST00000484799 DOCK3Q8IZD9 2030 aa1.59□□□□□ -2.16
SMC4-215ENST00000484799 KIF1BO60333 1816 aa1.59□□□□□ -2.16
SMC4-215ENST00000484799 MDC1Q14676 2089 aaKnown RBP1.59□□□□□ -2.16
SMC4-215ENST00000484799 RIC1Q4ADV7 1423 aa1.58□□□□□ -2.16
SMC4-215ENST00000484799 FMN1Q68DA7 1419 aa1.58□□□□□ -2.16
SMC4-215ENST00000484799 TRBV19A0A075B6N1 114 aa1.58□□□□□ -2.16
SMC4-215ENST00000484799 ZNF705FA8MVS1 300 aaPredicted RBP1.58□□□□□ -2.16
SMC4-215ENST00000484799 BUB1B-PAK6H3BSN5 160 aa1.58□□□□□ -2.16
SMC4-215ENST00000484799 TCL1BO95988 128 aa1.58□□□□□ -2.16
SMC4-215ENST00000484799 TRGC1P0CF51 173 aa1.58□□□□□ -2.16
SMC4-215ENST00000484799 COX6A1P12074 109 aa1.58□□□□□ -2.16
SMC4-215ENST00000484799 PSMD8P48556 350 aa1.58□□□□□ -2.16
SMC4-215ENST00000484799 DEFA1P59665 94 aa1.58□□□□□ -2.16
SMC4-215ENST00000484799 CDC42P60953 191 aa1.58□□□□□ -2.16
SMC4-215ENST00000484799 SUPT4H1P63272 117 aaKnown RBP1.58□□□□□ -2.16
SMC4-215ENST00000484799 TPRXLQ17RH7 258 aa1.58□□□□□ -2.16
SMC4-215ENST00000484799 LRRC28Q86X40 367 aaPredicted RBP1.58□□□□□ -2.16
SMC4-215ENST00000484799 RNASE11Q8TAA1 199 aaKnown RBP1.58□□□□□ -2.16
SMC4-215ENST00000484799 PRRT1Q99946 306 aa1.58□□□□□ -2.16
SMC4-215ENST00000484799 GINS4Q9BRT9 223 aa1.58□□□□□ -2.16
SMC4-215ENST00000484799 MIXL1Q9H2W2 232 aa1.58□□□□□ -2.16
SMC4-215ENST00000484799 CPAMD8Q8IZJ3 1885 aa1.58□□□□□ -2.16
SMC4-215ENST00000484799 SMARCA4P51532 1647 aa1.58□□□□□ -2.16
SMC4-215ENST00000484799 ROCK1Q13464 1354 aa1.58□□□□□ -2.16
SMC4-215ENST00000484799 TRAPPC13A5PLN9 417 aa1.57□□□□□ -2.16
SMC4-215ENST00000484799 SDCBPO00560 298 aaPredicted RBP1.57□□□□□ -2.16
SMC4-215ENST00000484799 PGLYRP1O75594 196 aaPredicted RBP1.57□□□□□ -2.16
SMC4-215ENST00000484799 CIAO1O76071 339 aa1.57□□□□□ -2.16
SMC4-215ENST00000484799 ATG12O94817 140 aa1.57□□□□□ -2.16
SMC4-215ENST00000484799 HTR1AP08908 422 aa1.57□□□□□ -2.16
SMC4-215ENST00000484799 SMIM17P0DL12 118 aa1.57□□□□□ -2.16
SMC4-215ENST00000484799 PPP1R2P41236 205 aa1.57□□□□□ -2.16
SMC4-215ENST00000484799 SLC38A11Q08AI6 406 aa1.57□□□□□ -2.16
SMC4-215ENST00000484799 HES1Q14469 280 aa1.57□□□□□ -2.16
SMC4-215ENST00000484799 PPP1R2P3Q6NXS1 205 aa1.57□□□□□ -2.16
SMC4-215ENST00000484799 DPPA3Q6W0C5 159 aa1.57□□□□□ -2.16
SMC4-215ENST00000484799 S100A7AQ86SG5 101 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms