RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 IFNA17P01571 189 aa6.86□□□□□ -1.31
COL8A1-207ENST00000483969 IGKV1-5P01602 117 aa6.86□□□□□ -1.31
COL8A1-207ENST00000483969 REG1AP05451 166 aa6.86□□□□□ -1.31
COL8A1-207ENST00000483969 TMEM187Q14656 261 aa6.86□□□□□ -1.31
COL8A1-207ENST00000483969 RBMS2Q15434 407 aaKnown RBP6.86□□□□□ -1.31
COL8A1-207ENST00000483969 KLK9Q2XQG4 91 aa6.86□□□□□ -1.31
COL8A1-207ENST00000483969 C9orf66Q5T8R8 295 aa6.86□□□□□ -1.31
COL8A1-207ENST00000483969 TMEM268Q5VZI3 342 aa6.86□□□□□ -1.31
COL8A1-207ENST00000483969 SLC25A24Q6NUK1 477 aa6.86□□□□□ -1.31
COL8A1-207ENST00000483969 LGI3Q8N145 548 aa6.86□□□□□ -1.31
COL8A1-207ENST00000483969 CENPSQ8N2Z9 138 aa6.86□□□□□ -1.31
COL8A1-207ENST00000483969 OR10W1Q8NGF6 305 aa6.86□□□□□ -1.31
COL8A1-207ENST00000483969 TMEM230Q96A57 120 aa6.86□□□□□ -1.31
COL8A1-207ENST00000483969 CXorf58Q96LI9 332 aa6.86□□□□□ -1.31
COL8A1-207ENST00000483969 SDHCQ99643 169 aaPredicted RBP6.86□□□□□ -1.31
COL8A1-207ENST00000483969 ALX4Q9H161 411 aaPredicted RBP6.86□□□□□ -1.31
COL8A1-207ENST00000483969 KLK9Q9UKQ9 250 aa6.86□□□□□ -1.31
COL8A1-207ENST00000483969 TNFRSF18Q9Y5U5 241 aa6.86□□□□□ -1.31
COL8A1-207ENST00000483969 IGLV11-55A0A075B6I3 123 aa6.85□□□□□ -1.31
COL8A1-207ENST00000483969 A0A0B4J293 547 aa6.85□□□□□ -1.31
COL8A1-207ENST00000483969 OVOL1O14753 267 aa6.85□□□□□ -1.31
COL8A1-207ENST00000483969 NDUFB6O95139 128 aa6.85□□□□□ -1.31
COL8A1-207ENST00000483969 NDUFB8O95169 186 aa6.85□□□□□ -1.31
COL8A1-207ENST00000483969 P0C879 139 aa6.85□□□□□ -1.31
COL8A1-207ENST00000483969 INSL3P51460 131 aa6.85□□□□□ -1.31
COL8A1-207ENST00000483969 CCR6P51684 374 aa6.85□□□□□ -1.31
COL8A1-207ENST00000483969 SUB1P53999 127 aaKnown RBP eCLIP6.85□□□□□ -1.31
COL8A1-207ENST00000483969 UBE2MP61081 183 aaKnown RBP6.85□□□□□ -1.31
COL8A1-207ENST00000483969 PRCDQ00LT1 54 aa6.85□□□□□ -1.31
COL8A1-207ENST00000483969 DEFA6Q01524 100 aa6.85□□□□□ -1.31
COL8A1-207ENST00000483969 WT1-ASQ06250 92 aa6.85□□□□□ -1.31
COL8A1-207ENST00000483969 EXOSC2Q13868 293 aaKnown RBP6.85□□□□□ -1.31
COL8A1-207ENST00000483969 ZNF846Q147U1 533 aa6.85□□□□□ -1.31
COL8A1-207ENST00000483969 C15orf32Q32M92 178 aa6.85□□□□□ -1.31
COL8A1-207ENST00000483969 DCUN1D4Q92564 292 aa6.85□□□□□ -1.31
COL8A1-207ENST00000483969 DLX4Q92988 240 aaPredicted RBP6.85□□□□□ -1.31
COL8A1-207ENST00000483969 EEF1AKMT3Q96AZ1 226 aa6.85□□□□□ -1.31
COL8A1-207ENST00000483969 GPR146Q96CH1 333 aa6.85□□□□□ -1.31
COL8A1-207ENST00000483969 ELOVL1Q9BW60 279 aa6.85□□□□□ -1.31
COL8A1-207ENST00000483969 PLEKHA3Q9HB20 300 aa6.85□□□□□ -1.31
COL8A1-207ENST00000483969 ENY2Q9NPA8 101 aa6.85□□□□□ -1.31
COL8A1-207ENST00000483969 F11RQ9Y624 299 aaKnown RBP6.85□□□□□ -1.31
COL8A1-207ENST00000483969 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.84□□□□□ -1.31
COL8A1-207ENST00000483969 TRBV7-1A0A0A6YYK4 115 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 A0A0B4J2A0 478 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 DUXBA0A1W2PPF3 345 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 SEC14L6B5MCN3 397 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 INS-IGF2F8WCM5 200 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 ST8SIA3O43173 380 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 SFT2D2O95562 160 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 HOXD3P31249 432 aaPredicted RBP6.84□□□□□ -1.31
COL8A1-207ENST00000483969 SNCAP37840 140 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 SPCS3P61009 180 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 SUPT4H1P63272 117 aaKnown RBP6.84□□□□□ -1.31
COL8A1-207ENST00000483969 IZUMO4Q1ZYL8 232 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 RPEL1Q2QD12 228 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 BEAN1Q3B7T3 259 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 KPRPQ5T749 579 aaPredicted RBP6.84□□□□□ -1.31
COL8A1-207ENST00000483969 OR2C3Q8N628 320 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 SLC35G3Q8N808 338 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 OR1P1Q8NH06 330 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 OR52E5Q8NH55 327 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 LHFPL5Q8TAF8 219 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 VN1R17PQ8TDU5 208 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 ST8SIA2Q92186 375 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 OR4C12Q96R67 309 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 WDR12Q9GZL7 423 aaKnown RBP6.84□□□□□ -1.31
COL8A1-207ENST00000483969 SHPKQ9UHJ6 478 aa6.84□□□□□ -1.31
COL8A1-207ENST00000483969 A0A1B0GU03 582 aa6.83□□□□□ -1.32
COL8A1-207ENST00000483969 PLA2G10O15496 165 aa6.83□□□□□ -1.32
COL8A1-207ENST00000483969 LYRM1O43325 122 aa6.83□□□□□ -1.32
COL8A1-207ENST00000483969 GGCTO75223 188 aaKnown RBP6.83□□□□□ -1.32
COL8A1-207ENST00000483969 NUDT3O95989 172 aa6.83□□□□□ -1.32
COL8A1-207ENST00000483969 CLEC3BP05452 202 aa6.83□□□□□ -1.32
COL8A1-207ENST00000483969 SULT1A3P0DMM9 295 aa6.83□□□□□ -1.32
COL8A1-207ENST00000483969 SULT1A4P0DMN0 295 aa6.83□□□□□ -1.32
COL8A1-207ENST00000483969 KLF5Q13887 457 aaPredicted RBP6.83□□□□□ -1.32
COL8A1-207ENST00000483969 MZT2BQ6NZ67 158 aa6.83□□□□□ -1.32
COL8A1-207ENST00000483969 CLEC19AQ6UXS0 136 aa6.83□□□□□ -1.32
COL8A1-207ENST00000483969 C19orf35Q6ZS72 473 aa6.83□□□□□ -1.32
COL8A1-207ENST00000483969 LYZL2Q7Z4W2 148 aa6.83□□□□□ -1.32
COL8A1-207ENST00000483969 C16orf92Q96LL3 132 aa6.83□□□□□ -1.32
COL8A1-207ENST00000483969 ATP6V0BQ99437 205 aa6.83□□□□□ -1.32
COL8A1-207ENST00000483969 MLST8Q9BVC4 326 aa6.83□□□□□ -1.32
COL8A1-207ENST00000483969 TET2Q6N021 2002 aaPredicted RBP6.83□□□□□ -1.32
COL8A1-207ENST00000483969 A0A0G2JRQ6 117 aa6.82□□□□□ -1.32
COL8A1-207ENST00000483969 CEBPZOSA8MTT3 80 aa6.82□□□□□ -1.32
COL8A1-207ENST00000483969 HOXA1P49639 335 aaPredicted RBP6.82□□□□□ -1.32
COL8A1-207ENST00000483969 DEFA5Q01523 94 aa6.82□□□□□ -1.32
COL8A1-207ENST00000483969 PPP1R1AQ13522 171 aa6.82□□□□□ -1.32
COL8A1-207ENST00000483969 SMCO1Q147U7 214 aa6.82□□□□□ -1.32
COL8A1-207ENST00000483969 FAM106AQ4KMX7 169 aa6.82□□□□□ -1.32
COL8A1-207ENST00000483969 AARDQ4LEZ3 155 aa6.82□□□□□ -1.32
COL8A1-207ENST00000483969 ACSM6Q6P461 480 aa6.82□□□□□ -1.32
COL8A1-207ENST00000483969 NOXA1Q86UR1 476 aa6.82□□□□□ -1.32
COL8A1-207ENST00000483969 LRTM2Q8N967 370 aa6.82□□□□□ -1.32
COL8A1-207ENST00000483969 ZNF114Q8NC26 417 aa6.82□□□□□ -1.32
COL8A1-207ENST00000483969 COQ8AQ8NI60 647 aa6.82□□□□□ -1.32
COL8A1-207ENST00000483969 HIPK2Q9H2X6 1198 aa6.82□□□□□ -1.32
COL8A1-207ENST00000483969 HEYLQ9NQ87 328 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms