RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 SMIM31A0A1B0GVY4 71 aa13.26□□□□□ -0.29
ATG4B-221ENST00000483778 UBE2CO00762 179 aa13.26□□□□□ -0.29
ATG4B-221ENST00000483778 NUPL2O15504 423 aaKnown RBP13.26□□□□□ -0.29
ATG4B-221ENST00000483778 LY6G6CO95867 125 aa13.26□□□□□ -0.29
ATG4B-221ENST00000483778 RCVRNP35243 200 aa13.26□□□□□ -0.29
ATG4B-221ENST00000483778 CEMP1Q6PRD7 247 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-221ENST00000483778 KIR2DL5AQ8N109 375 aa13.26□□□□□ -0.29
ATG4B-221ENST00000483778 KIR2DL5BQ8NHK3 375 aa13.26□□□□□ -0.29
ATG4B-221ENST00000483778 GALNT14Q96FL9 552 aa13.26□□□□□ -0.29
ATG4B-221ENST00000483778 TP53RKQ96S44 253 aa13.26□□□□□ -0.29
ATG4B-221ENST00000483778 TNFAIP8O95379 198 aa13.25□□□□□ -0.29
ATG4B-221ENST00000483778 P0C879 139 aa13.25□□□□□ -0.29
ATG4B-221ENST00000483778 MLANAQ16655 118 aa13.25□□□□□ -0.29
ATG4B-221ENST00000483778 TOMM20LQ6UXN7 152 aa13.25□□□□□ -0.29
ATG4B-221ENST00000483778 ZNF114Q8NC26 417 aa13.25□□□□□ -0.29
ATG4B-221ENST00000483778 OR52I2Q8NH67 350 aa13.25□□□□□ -0.29
ATG4B-221ENST00000483778 CMTM3Q96MX0 182 aa13.25□□□□□ -0.29
ATG4B-221ENST00000483778 TXN2Q99757 166 aa13.25□□□□□ -0.29
ATG4B-221ENST00000483778 MRPL36Q9P0J6 103 aaKnown RBP13.25□□□□□ -0.29
ATG4B-221ENST00000483778 TRAV14DV4A0A0A6YYC5 116 aa13.24□□□□□ -0.29
ATG4B-221ENST00000483778 IGHV3-66A0A0C4DH42 116 aa13.24□□□□□ -0.29
ATG4B-221ENST00000483778 CD3DP04234 171 aa13.24□□□□□ -0.29
ATG4B-221ENST00000483778 RELQ04864 619 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-221ENST00000483778 SP6Q3SY56 376 aa13.24□□□□□ -0.29
ATG4B-221ENST00000483778 LHFPL1Q86WI0 220 aa13.24□□□□□ -0.29
ATG4B-221ENST00000483778 OR4D10Q8NGI6 311 aa13.24□□□□□ -0.29
ATG4B-221ENST00000483778 ST8SIA2Q92186 375 aa13.24□□□□□ -0.29
ATG4B-221ENST00000483778 VCX3AQ9NNX9 186 aa13.24□□□□□ -0.29
ATG4B-221ENST00000483778 A0A0G2JRQ6 117 aa13.23□□□□□ -0.29
ATG4B-221ENST00000483778 ST8SIA3O43173 380 aa13.23□□□□□ -0.29
ATG4B-221ENST00000483778 PGAM2P15259 253 aa13.23□□□□□ -0.29
ATG4B-221ENST00000483778 S100GP29377 79 aa13.23□□□□□ -0.29
ATG4B-221ENST00000483778 ETV6P41212 452 aa13.23□□□□□ -0.29
ATG4B-221ENST00000483778 TCF24Q7RTU0 167 aa13.23□□□□□ -0.29
ATG4B-221ENST00000483778 FAM24BQ8N5W8 94 aa13.23□□□□□ -0.29
ATG4B-221ENST00000483778 ABHD1Q96SE0 405 aa13.23□□□□□ -0.29
ATG4B-221ENST00000483778 A0A1B0GU03 582 aa13.22□□□□□ -0.29
ATG4B-221ENST00000483778 FAM25AB3EWG3 89 aa13.22□□□□□ -0.29
ATG4B-221ENST00000483778 FAM25CB3EWG5 89 aa13.22□□□□□ -0.29
ATG4B-221ENST00000483778 FAM25GB3EWG6 89 aa13.22□□□□□ -0.29
ATG4B-221ENST00000483778 GNG7O60262 68 aa13.22□□□□□ -0.29
ATG4B-221ENST00000483778 TMEM50AO95807 157 aa13.22□□□□□ -0.29
ATG4B-221ENST00000483778 RORCP51449 518 aa13.22□□□□□ -0.29
ATG4B-221ENST00000483778 PIGPP57054 158 aa13.22□□□□□ -0.29
ATG4B-221ENST00000483778 RND3P61587 244 aa13.22□□□□□ -0.29
ATG4B-221ENST00000483778 ERHP84090 104 aaKnown RBP13.22□□□□□ -0.29
ATG4B-221ENST00000483778 CTF1Q16619 201 aa13.22□□□□□ -0.29
ATG4B-221ENST00000483778 CSTL1Q9H114 145 aa13.22□□□□□ -0.29
ATG4B-221ENST00000483778 ZFAND3Q9H8U3 227 aa13.22□□□□□ -0.29
ATG4B-221ENST00000483778 NUPR2A6NF83 97 aa13.21□□□□□ -0.29
ATG4B-221ENST00000483778 DFFBO76075 338 aa13.21□□□□□ -0.29
ATG4B-221ENST00000483778 RNASE2P10153 161 aaKnown RBP13.21□□□□□ -0.29
ATG4B-221ENST00000483778 PVRIGQ6DKI7 326 aa13.21□□□□□ -0.29
ATG4B-221ENST00000483778 Q6ZRM9 215 aa13.21□□□□□ -0.29
ATG4B-221ENST00000483778 FNDC4Q9H6D8 234 aaPredicted RBP13.21□□□□□ -0.29
ATG4B-221ENST00000483778 VSIRQ9H7M9 311 aa13.21□□□□□ -0.29
ATG4B-221ENST00000483778 PUS1Q9Y606 427 aaKnown RBP eCLIP13.21□□□□□ -0.29
ATG4B-221ENST00000483778 PPP5CP53041 499 aa13.2□□□□□ -0.3
ATG4B-221ENST00000483778 RNASE10Q5GAN6 216 aaKnown RBP13.2□□□□□ -0.3
ATG4B-221ENST00000483778 MS4A6AQ9H2W1 248 aa13.2□□□□□ -0.3
ATG4B-221ENST00000483778 MTFP1Q9UDX5 166 aa13.2□□□□□ -0.3
ATG4B-221ENST00000483778 FRAS1Q86XX4 4008 aa13.2□□□□□ -0.3
ATG4B-221ENST00000483778 KMT2AQ03164 3969 aa13.2□□□□□ -0.3
ATG4B-221ENST00000483778 C3orf85A0A1B0GTC6 90 aa13.19□□□□□ -0.3
ATG4B-221ENST00000483778 MPTX1A8MV57 137 aa13.19□□□□□ -0.3
ATG4B-221ENST00000483778 DEFB4AO15263 64 aa13.19□□□□□ -0.3
ATG4B-221ENST00000483778 SMIM18P0DKX4 95 aa13.19□□□□□ -0.3
ATG4B-221ENST00000483778 LEMD1Q68G75 181 aa13.19□□□□□ -0.3
ATG4B-221ENST00000483778 RPP25LQ8N5L8 163 aaKnown RBP13.19□□□□□ -0.3
ATG4B-221ENST00000483778 DUSP18Q8NEJ0 188 aa13.19□□□□□ -0.3
ATG4B-221ENST00000483778 PHLDA1Q8WV24 401 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-221ENST00000483778 MIXL1Q9H2W2 232 aa13.19□□□□□ -0.3
ATG4B-221ENST00000483778 EXTL2Q9UBQ6 330 aa13.19□□□□□ -0.3
ATG4B-221ENST00000483778 IFNA17P01571 189 aa13.18□□□□□ -0.3
ATG4B-221ENST00000483778 ATF4P18848 351 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-221ENST00000483778 SNCAP37840 140 aa13.18□□□□□ -0.3
ATG4B-221ENST00000483778 DEFB131AP59861 70 aa13.18□□□□□ -0.3
ATG4B-221ENST00000483778 NANOS2P60321 138 aaKnown RBP13.18□□□□□ -0.3
ATG4B-221ENST00000483778 SLC35G3Q8N808 338 aa13.18□□□□□ -0.3
ATG4B-221ENST00000483778 OR13C8Q8NGS7 320 aa13.18□□□□□ -0.3
ATG4B-221ENST00000483778 MARCH1Q8TCQ1 289 aa13.18□□□□□ -0.3
ATG4B-221ENST00000483778 ZNF486Q96H40 463 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-221ENST00000483778 RARRES2Q99969 163 aa13.18□□□□□ -0.3
ATG4B-221ENST00000483778 INS-IGF2F8WCM5 200 aa13.17□□□□□ -0.3
ATG4B-221ENST00000483778 ZNF182P17025 639 aaPredicted RBP13.17□□□□□ -0.3
ATG4B-221ENST00000483778 NPBWR1P48145 328 aa13.17□□□□□ -0.3
ATG4B-221ENST00000483778 AKR1C2P52895 323 aa13.17□□□□□ -0.3
ATG4B-221ENST00000483778 FAAP20Q6NZ36 180 aa13.17□□□□□ -0.3
ATG4B-221ENST00000483778 MZT2AQ6P582 158 aa13.17□□□□□ -0.3
ATG4B-221ENST00000483778 ZNF600Q6ZNG1 722 aa13.17□□□□□ -0.3
ATG4B-221ENST00000483778 OR11H2Q8NH07 326 aa13.17□□□□□ -0.3
ATG4B-221ENST00000483778 TERB2Q8NHR7 220 aa13.17□□□□□ -0.3
ATG4B-221ENST00000483778 LHFPL5Q8TAF8 219 aa13.17□□□□□ -0.3
ATG4B-221ENST00000483778 DEDDO75618 318 aa13.16□□□□□ -0.3
ATG4B-221ENST00000483778 GABARAPO95166 117 aa13.16□□□□□ -0.3
ATG4B-221ENST00000483778 CD74P04233 296 aa13.16□□□□□ -0.3
ATG4B-221ENST00000483778 GIG44P09565 113 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-221ENST00000483778 UCP1P25874 307 aa13.16□□□□□ -0.3
ATG4B-221ENST00000483778 CMC4P56277 68 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-221ENST00000483778 RPL11P62913 178 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms