RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 PRR20DP86480 221 aa11.16□□□□□ -0.62
CLK3-204ENST00000483723 PRR20BP86481 221 aa11.16□□□□□ -0.62
CLK3-204ENST00000483723 PRR20AP86496 221 aa11.16□□□□□ -0.62
CLK3-204ENST00000483723 RAB31Q13636 194 aa11.16□□□□□ -0.62
CLK3-204ENST00000483723 FAM120AOSQ5T036 256 aa11.16□□□□□ -0.62
CLK3-204ENST00000483723 SLC16A13Q7RTY0 426 aa11.16□□□□□ -0.62
CLK3-204ENST00000483723 PBDC1Q9BVG4 233 aa11.16□□□□□ -0.62
CLK3-204ENST00000483723 ACTR3CQ9C0K3 210 aaPredicted RBP11.16□□□□□ -0.62
CLK3-204ENST00000483723 SLC39A9Q9NUM3 307 aa11.16□□□□□ -0.62
CLK3-204ENST00000483723 C1RLQ9NZP8 487 aa11.16□□□□□ -0.62
CLK3-204ENST00000483723 SLC45A2Q9UMX9 530 aa11.16□□□□□ -0.62
CLK3-204ENST00000483723 PXMP4Q9Y6I8 212 aa11.16□□□□□ -0.62
CLK3-204ENST00000483723 PTPN13Q12923 2485 aa11.16□□□□□ -0.62
CLK3-204ENST00000483723 RBFOX3A6NFN3 312 aa11.15□□□□□ -0.62
CLK3-204ENST00000483723 REG1AP05451 166 aa11.15□□□□□ -0.62
CLK3-204ENST00000483723 LINC00869P0C866 280 aa11.15□□□□□ -0.62
CLK3-204ENST00000483723 ADCYAP1P18509 176 aa11.15□□□□□ -0.62
CLK3-204ENST00000483723 GNB1P62873 340 aa11.15□□□□□ -0.62
CLK3-204ENST00000483723 FXYD3Q14802 87 aa11.15□□□□□ -0.62
CLK3-204ENST00000483723 TMEM249Q2WGJ8 235 aa11.15□□□□□ -0.62
CLK3-204ENST00000483723 MIC13Q5XKP0 118 aa11.15□□□□□ -0.62
CLK3-204ENST00000483723 CCDC28AQ8IWP9 274 aa11.15□□□□□ -0.62
CLK3-204ENST00000483723 Q8N9W7 124 aa11.15□□□□□ -0.62
CLK3-204ENST00000483723 LINC01356Q8N9X3 169 aa11.15□□□□□ -0.62
CLK3-204ENST00000483723 C7orf69Q9H7B7 122 aa11.15□□□□□ -0.62
CLK3-204ENST00000483723 CARHSP1Q9Y2V2 147 aaKnown RBP11.15□□□□□ -0.62
CLK3-204ENST00000483723 F11RQ9Y624 299 aaKnown RBP11.15□□□□□ -0.62
CLK3-204ENST00000483723 MAP1LC3B2A6NCE7 125 aa11.15□□□□□ -0.63
CLK3-204ENST00000483723 CORTO00230 105 aa11.15□□□□□ -0.63
CLK3-204ENST00000483723 CTRB1P17538 263 aa11.15□□□□□ -0.63
CLK3-204ENST00000483723 CTRB2Q6GPI1 263 aa11.15□□□□□ -0.63
CLK3-204ENST00000483723 LCN15Q6UWW0 184 aa11.15□□□□□ -0.63
CLK3-204ENST00000483723 PRSS57Q6UWY2 283 aa11.15□□□□□ -0.63
CLK3-204ENST00000483723 NARS2Q96I59 477 aaKnown RBP11.15□□□□□ -0.63
CLK3-204ENST00000483723 SLC35E1Q96K37 410 aa11.15□□□□□ -0.63
CLK3-204ENST00000483723 SEC11CQ9BY50 192 aa11.15□□□□□ -0.63
CLK3-204ENST00000483723 MAP1LC3BQ9GZQ8 125 aa11.15□□□□□ -0.63
CLK3-204ENST00000483723 HIF1ANQ9NWT6 349 aa11.15□□□□□ -0.63
CLK3-204ENST00000483723 A0A1B0GV50 99 aa11.14□□□□□ -0.63
CLK3-204ENST00000483723 CNIH1O95406 144 aa11.14□□□□□ -0.63
CLK3-204ENST00000483723 ZNF506Q5JVG8 444 aa11.14□□□□□ -0.63
CLK3-204ENST00000483723 RUSC1-AS1Q66K80 236 aa11.14□□□□□ -0.63
CLK3-204ENST00000483723 ETFRF1Q6IPR1 90 aa11.14□□□□□ -0.63
CLK3-204ENST00000483723 THAP8Q8NA92 274 aa11.14□□□□□ -0.63
CLK3-204ENST00000483723 OR2T6Q8NHC8 308 aa11.14□□□□□ -0.63
CLK3-204ENST00000483723 SSMEM1Q8WWF3 244 aa11.14□□□□□ -0.63
CLK3-204ENST00000483723 RAB24Q969Q5 203 aa11.14□□□□□ -0.63
CLK3-204ENST00000483723 EIF5A2Q9GZV4 153 aaKnown RBP11.14□□□□□ -0.63
CLK3-204ENST00000483723 DMRT1Q9Y5R6 373 aa11.14□□□□□ -0.63
CLK3-204ENST00000483723 SPG11Q96JI7 2443 aa11.14□□□□□ -0.63
CLK3-204ENST00000483723 TRAV40A0A0B4J280 105 aa11.13□□□□□ -0.63
CLK3-204ENST00000483723 TSPAN9O75954 239 aa11.13□□□□□ -0.63
CLK3-204ENST00000483723 IGHV4-38-2P0DP08 117 aa11.13□□□□□ -0.63
CLK3-204ENST00000483723 B2MP61769 119 aa11.13□□□□□ -0.63
CLK3-204ENST00000483723 CX3CL1P78423 397 aa11.13□□□□□ -0.63
CLK3-204ENST00000483723 FAM122CQ6P4D5 195 aa11.13□□□□□ -0.63
CLK3-204ENST00000483723 STPG3Q8N7X2 389 aa11.13□□□□□ -0.63
CLK3-204ENST00000483723 PIFOQ8TCI5 191 aa11.13□□□□□ -0.63
CLK3-204ENST00000483723 RARRES2Q99969 163 aa11.13□□□□□ -0.63
CLK3-204ENST00000483723 DOPEY2Q9Y3R5 2298 aa11.13□□□□□ -0.63
CLK3-204ENST00000483723 NCBP2LA6PVI3 153 aaKnown RBP11.12□□□□□ -0.63
CLK3-204ENST00000483723 F8W036 122 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 AVPP01185 164 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 HLA-DRB1P01911 266 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 OR10J1P30954 320 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 CDC34P49427 236 aaPredicted RBP11.12□□□□□ -0.63
CLK3-204ENST00000483723 ICAM4Q14773 271 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 KHDC3LQ587J8 217 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 GCSAMLQ5JQS6 135 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 KLF17Q5JT82 389 aaPredicted RBP11.12□□□□□ -0.63
CLK3-204ENST00000483723 OR1L6Q8NGR2 347 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 MRPL36Q9P0J6 103 aaKnown RBP11.12□□□□□ -0.63
CLK3-204ENST00000483723 FBN2P35556 2912 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 UTP20O75691 2785 aaKnown RBP11.12□□□□□ -0.63
CLK3-204ENST00000483723 IGKV1D-37A0A075B6S9 117 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 LOC102723971A0A1B0GUV8 181 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 J3QLI3 93 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 APOC3P02656 99 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 SFTA3P0C7M3 94 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 EGR2P11161 476 aaPredicted RBP11.12□□□□□ -0.63
CLK3-204ENST00000483723 FGF8P55075 233 aaPredicted RBP11.12□□□□□ -0.63
CLK3-204ENST00000483723 ASPHD1Q5U4P2 390 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 KRTAP1-3Q8IUG1 177 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 TMEM116Q8NCL8 245 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 NPIPB3Q92617 1050 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 SLC25A33Q9BSK2 321 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 WNT10AQ9GZT5 417 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 SLC25A22Q9H936 323 aa11.12□□□□□ -0.63
CLK3-204ENST00000483723 NAV3Q8IVL0 2385 aa11.11□□□□□ -0.63
CLK3-204ENST00000483723 IGHV3OR16-10A0A075B7F0 116 aa11.11□□□□□ -0.63
CLK3-204ENST00000483723 IGHV7-81A0A0B4J1V7 117 aa11.11□□□□□ -0.63
CLK3-204ENST00000483723 A0A0U1RQK1 487 aa11.11□□□□□ -0.63
CLK3-204ENST00000483723 NPIPB5A8MRT5 1133 aa11.11□□□□□ -0.63
CLK3-204ENST00000483723 I3L2K1 104 aa11.11□□□□□ -0.63
CLK3-204ENST00000483723 HSPB1P04792 205 aaKnown RBP11.11□□□□□ -0.63
CLK3-204ENST00000483723 SRP19P09132 144 aaKnown RBP11.11□□□□□ -0.63
CLK3-204ENST00000483723 APELAP0DMC3 54 aa11.11□□□□□ -0.63
CLK3-204ENST00000483723 NDPQ00604 133 aa11.11□□□□□ -0.63
CLK3-204ENST00000483723 HAGHQ16775 308 aa11.11□□□□□ -0.63
CLK3-204ENST00000483723 BRD3OSQ6XYD6 125 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms