RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 PPP1R2P1Q96PQ5 205 aa1.29□□□□□ -2.2
PMS1-219ENST00000483293 TNRC6BQ9UPQ9 1833 aaKnown RBP1.29□□□□□ -2.2
PMS1-219ENST00000483293 FUOMA2VDF0 154 aa1.28□□□□□ -2.2
PMS1-219ENST00000483293 PSMD12O00232 456 aaPredicted RBP1.28□□□□□ -2.2
PMS1-219ENST00000483293 IFNA5P01569 189 aa1.28□□□□□ -2.2
PMS1-219ENST00000483293 HLA-DRB1P01911 266 aa1.28□□□□□ -2.2
PMS1-219ENST00000483293 OR5G3P0C626 314 aa1.28□□□□□ -2.2
PMS1-219ENST00000483293 ANKRD29Q8N6D5 301 aa1.28□□□□□ -2.2
PMS1-219ENST00000483293 OR4C6Q8NH72 309 aa1.28□□□□□ -2.2
PMS1-219ENST00000483293 FBXL12Q9NXK8 326 aa1.28□□□□□ -2.2
PMS1-219ENST00000483293 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.27□□□□□ -2.21
PMS1-219ENST00000483293 TRAV1-1A0A0B4J248 108 aa1.27□□□□□ -2.21
PMS1-219ENST00000483293 IGKV1-9A0A0C4DH69 117 aa1.27□□□□□ -2.21
PMS1-219ENST00000483293 HTR1AP08908 422 aa1.27□□□□□ -2.21
PMS1-219ENST00000483293 ASAH2BP0C7U1 165 aa1.27□□□□□ -2.21
PMS1-219ENST00000483293 HIST1H1EP10412 219 aaKnown RBP1.27□□□□□ -2.21
PMS1-219ENST00000483293 KHDC3LQ587J8 217 aa1.27□□□□□ -2.21
PMS1-219ENST00000483293 Q6ZQT0 140 aa1.27□□□□□ -2.21
PMS1-219ENST00000483293 PFN4Q8NHR9 129 aa1.27□□□□□ -2.21
PMS1-219ENST00000483293 CEP192Q8TEP8 1941 aa1.27□□□□□ -2.21
PMS1-219ENST00000483293 ECM29Q5VYK3 1845 aa1.26□□□□□ -2.21
PMS1-219ENST00000483293 HECW2Q9P2P5 1572 aa1.26□□□□□ -2.21
PMS1-219ENST00000483293 DPRXA6NFQ7 191 aa1.26□□□□□ -2.21
PMS1-219ENST00000483293 FAAHO00519 579 aa1.26□□□□□ -2.21
PMS1-219ENST00000483293 CTSDP07339 412 aaPredicted RBP1.26□□□□□ -2.21
PMS1-219ENST00000483293 CD79AP11912 226 aa1.26□□□□□ -2.21
PMS1-219ENST00000483293 BRS3P32247 399 aa1.26□□□□□ -2.21
PMS1-219ENST00000483293 NKX2-5P52952 324 aaPredicted RBP1.26□□□□□ -2.21
PMS1-219ENST00000483293 RPS20P60866 119 aaKnown RBP1.26□□□□□ -2.21
PMS1-219ENST00000483293 SNRPD2P62316 118 aaKnown RBP1.26□□□□□ -2.21
PMS1-219ENST00000483293 DPPA3Q6W0C5 159 aa1.26□□□□□ -2.21
PMS1-219ENST00000483293 ZNF826PQ6ZT77 177 aa1.26□□□□□ -2.21
PMS1-219ENST00000483293 C1orf158Q8N1D5 194 aa1.26□□□□□ -2.21
PMS1-219ENST00000483293 PRTFDC1Q9NRG1 225 aa1.26□□□□□ -2.21
PMS1-219ENST00000483293 TOPBP1Q92547 1522 aa1.25□□□□□ -2.21
PMS1-219ENST00000483293 SNAPC4Q5SXM2 1469 aa1.25□□□□□ -2.21
PMS1-219ENST00000483293 PLXND1Q9Y4D7 1925 aa1.25□□□□□ -2.21
PMS1-219ENST00000483293 ZNF93P35789 620 aaPredicted RBP1.25□□□□□ -2.21
PMS1-219ENST00000483293 RPL5P46777 297 aaKnown RBP1.25□□□□□ -2.21
PMS1-219ENST00000483293 OR2F1Q13607 317 aa1.25□□□□□ -2.21
PMS1-219ENST00000483293 DEFB115Q30KQ5 88 aa1.25□□□□□ -2.21
PMS1-219ENST00000483293 MIR17HGQ75NE6 70 aa1.25□□□□□ -2.21
PMS1-219ENST00000483293 OOSP2Q86WS3 158 aa1.25□□□□□ -2.21
PMS1-219ENST00000483293 LRRC25Q8N386 305 aaPredicted RBP1.25□□□□□ -2.21
PMS1-219ENST00000483293 OR4E2Q8NGC2 313 aa1.25□□□□□ -2.21
PMS1-219ENST00000483293 OR5A1Q8NGJ0 315 aa1.25□□□□□ -2.21
PMS1-219ENST00000483293 TMEM147Q9BVK8 224 aa1.25□□□□□ -2.21
PMS1-219ENST00000483293 COMMD5Q9GZQ3 224 aa1.25□□□□□ -2.21
PMS1-219ENST00000483293 COL4A5P29400 1685 aa1.25□□□□□ -2.21
PMS1-219ENST00000483293 WRNQ14191 1432 aaPredicted RBP eCLIP1.24□□□□□ -2.21
PMS1-219ENST00000483293 TRBV6-7A0A0A0MS04 114 aa1.24□□□□□ -2.21
PMS1-219ENST00000483293 PQLC2LA1A4F0 135 aa1.24□□□□□ -2.21
PMS1-219ENST00000483293 CCDC122Q5T0U0 273 aa1.24□□□□□ -2.21
PMS1-219ENST00000483293 SPOPLQ6IQ16 392 aa1.24□□□□□ -2.21
PMS1-219ENST00000483293 LPCAT3Q6P1A2 487 aa1.24□□□□□ -2.21
PMS1-219ENST00000483293 C20orf196Q8IYI0 205 aa1.24□□□□□ -2.21
PMS1-219ENST00000483293 FAM19A2Q8N3H0 131 aa1.24□□□□□ -2.21
PMS1-219ENST00000483293 LINC00311Q8N616 119 aa1.24□□□□□ -2.21
PMS1-219ENST00000483293 OR13C4Q8NGS5 318 aa1.24□□□□□ -2.21
PMS1-219ENST00000483293 TERB2Q8NHR7 220 aa1.24□□□□□ -2.21
PMS1-219ENST00000483293 H1FXQ92522 213 aaKnown RBP1.24□□□□□ -2.21
PMS1-219ENST00000483293 PARD6GQ9BYG4 376 aaPredicted RBP1.24□□□□□ -2.21
PMS1-219ENST00000483293 MAP3K5Q99683 1374 aa1.23□□□□□ -2.21
PMS1-219ENST00000483293 TNRC6AQ8NDV7 1962 aaKnown RBP1.23□□□□□ -2.21
PMS1-219ENST00000483293 ZNF106Q9H2Y7 1883 aaKnown RBP1.23□□□□□ -2.21
PMS1-219ENST00000483293 AHSA1O95433 338 aa1.23□□□□□ -2.21
PMS1-219ENST00000483293 CRYZL1O95825 349 aa1.23□□□□□ -2.21
PMS1-219ENST00000483293 HIST1H1TP22492 207 aaPredicted RBP1.23□□□□□ -2.21
PMS1-219ENST00000483293 MAGOHP61326 146 aaKnown RBP1.23□□□□□ -2.21
PMS1-219ENST00000483293 HIST3H3Q16695 136 aa1.23□□□□□ -2.21
PMS1-219ENST00000483293 RNASE10Q5GAN6 216 aaKnown RBP1.23□□□□□ -2.21
PMS1-219ENST00000483293 OR4D11Q8NGI4 311 aa1.23□□□□□ -2.21
PMS1-219ENST00000483293 OBSCN-AS1Q96MR7 158 aa1.23□□□□□ -2.21
PMS1-219ENST00000483293 ULBP3Q9BZM4 244 aa1.23□□□□□ -2.21
PMS1-219ENST00000483293 SLC39A9Q9NUM3 307 aa1.23□□□□□ -2.21
PMS1-219ENST00000483293 SCN3AQ9NY46 2000 aa1.23□□□□□ -2.21
PMS1-219ENST00000483293 MTUS2Q5JR59 1369 aa1.22□□□□□ -2.21
PMS1-219ENST00000483293 NOTCH1P46531 2555 aa1.22□□□□□ -2.21
PMS1-219ENST00000483293 TRAV9-1A0A075B6T8 112 aa1.22□□□□□ -2.21
PMS1-219ENST00000483293 EXOC1LA0A1B0GW35 172 aa1.22□□□□□ -2.21
PMS1-219ENST00000483293 PSME3P61289 254 aa1.22□□□□□ -2.21
PMS1-219ENST00000483293 TOMM6Q96B49 74 aa1.22□□□□□ -2.21
PMS1-219ENST00000483293 ERGIC3Q9Y282 383 aa1.22□□□□□ -2.21
PMS1-219ENST00000483293 EML5Q05BV3 1969 aa1.21□□□□□ -2.22
PMS1-219ENST00000483293 A0A087WX48 190 aa1.21□□□□□ -2.22
PMS1-219ENST00000483293 C2orf70A6NJV1 201 aa1.21□□□□□ -2.22
PMS1-219ENST00000483293 BUB1B-PAK6H3BSN5 160 aa1.21□□□□□ -2.22
PMS1-219ENST00000483293 CHP2O43745 196 aa1.21□□□□□ -2.22
PMS1-219ENST00000483293 SULT1A1P50225 295 aa1.21□□□□□ -2.22
PMS1-219ENST00000483293 RHEBQ15382 184 aa1.21□□□□□ -2.22
PMS1-219ENST00000483293 SIGLECL1Q8N7X8 197 aa1.21□□□□□ -2.22
PMS1-219ENST00000483293 OR52E6Q96RD3 313 aa1.21□□□□□ -2.22
PMS1-219ENST00000483293 NIPSNAP1Q9BPW8 284 aa1.21□□□□□ -2.22
PMS1-219ENST00000483293 KLK9Q9UKQ9 250 aa1.21□□□□□ -2.22
PMS1-219ENST00000483293 AHNAK2Q8IVF2 5795 aa1.21□□□□□ -2.22
PMS1-219ENST00000483293 TRAV3A0A0B4J244 114 aa1.2□□□□□ -2.22
PMS1-219ENST00000483293 LYPLA2O95372 231 aa1.2□□□□□ -2.22
PMS1-219ENST00000483293 MGST1P10620 155 aaKnown RBP1.2□□□□□ -2.22
PMS1-219ENST00000483293 SSR2P43308 183 aa1.2□□□□□ -2.22
PMS1-219ENST00000483293 DEFB128Q7Z7B8 93 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms