RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 PPDPFQ9H3Y8 114 aa1.22□□□□□ -2.21
USH2A-204ENST00000481786 RHOFQ9HBH0 211 aa1.22□□□□□ -2.21
USH2A-204ENST00000481786 HMG20AQ9NP66 347 aa1.22□□□□□ -2.21
USH2A-204ENST00000481786 RBFOX1Q9NWB1 397 aaKnown RBP1.22□□□□□ -2.21
USH2A-204ENST00000481786 PAK1IP1Q9NWT1 392 aaPredicted RBP1.22□□□□□ -2.21
USH2A-204ENST00000481786 DNAJC27Q9NZQ0 273 aa1.22□□□□□ -2.21
USH2A-204ENST00000481786 ENOPH1Q9UHY7 261 aa1.22□□□□□ -2.21
USH2A-204ENST00000481786 KIF25Q9UIL4 384 aa1.22□□□□□ -2.21
USH2A-204ENST00000481786 VAX2Q9UIW0 290 aa1.22□□□□□ -2.21
USH2A-204ENST00000481786 AP3M1Q9Y2T2 418 aa1.22□□□□□ -2.21
USH2A-204ENST00000481786 SNX24Q9Y343 169 aa1.22□□□□□ -2.21
USH2A-204ENST00000481786 STRAPQ9Y3F4 350 aaKnown RBP1.22□□□□□ -2.21
USH2A-204ENST00000481786 YTHDF2Q9Y5A9 579 aaKnown RBP1.22□□□□□ -2.21
USH2A-204ENST00000481786 IER3IP1Q9Y5U9 82 aa1.22□□□□□ -2.21
USH2A-204ENST00000481786 GMEB1Q9Y692 573 aa1.22□□□□□ -2.21
USH2A-204ENST00000481786 IGKV2-28A0A075B6P5 120 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 TRBV7-1A0A0A6YYK4 115 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 TRAV5A0A0B4J249 113 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 A0A0D9SG52 128 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 FAM230AA0A1W2PPH8 454 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 OR2T8A6NH00 312 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 TVP23AA6NH52 213 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 LYRM9A8MSI8 78 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 C15orf65H3BRN8 121 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 H7C2Y5 167 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 MFNGO00587 321 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 SLC31A2O15432 143 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 DHRS3O75911 302 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 OR2J3O76001 311 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 INSP01308 110 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 IGKV2D-28P01615 120 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 HBE1P02100 147 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 ATP5G1P05496 136 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 H2BFMP0C1H6 154 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 PSKH1P11801 424 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 HIST1H1CP16403 213 aaKnown RBP1.21□□□□□ -2.22
USH2A-204ENST00000481786 PRKACAP17612 351 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 GPX2P18283 190 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 RCC1P18754 421 aaPredicted RBP1.21□□□□□ -2.22
USH2A-204ENST00000481786 M6PRP20645 277 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 IL12AP29459 219 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 FMO3P31513 532 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 MAS1LP35410 378 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 ATP5G3P48201 142 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 UNC119Q13432 240 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 EIF4EBP1Q13541 118 aaPredicted RBP1.21□□□□□ -2.22
USH2A-204ENST00000481786 ATP6AP1Q15904 470 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 KRTAP6-3Q3LI67 103 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 IBA57Q5T440 356 aaKnown RBP1.21□□□□□ -2.22
USH2A-204ENST00000481786 OGFRL1Q5TC84 451 aaPredicted RBP1.21□□□□□ -2.22
USH2A-204ENST00000481786 NXNL2Q5VZ03 156 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 OR8G2PQ6IF36 304 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 ETFRF1Q6IPR1 90 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 FAM71F2Q6NXP2 309 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 MBOAT2Q6ZWT7 520 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 PROKR2Q8NFJ6 384 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 OR4B1Q8NGF8 309 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 OR52I1Q8NGK6 324 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 RXFP4Q8TDU9 374 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 EEF1AKMT3Q96AZ1 226 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 GNPNAT1Q96EK6 184 aaPredicted RBP1.21□□□□□ -2.22
USH2A-204ENST00000481786 ERMAPQ96PL5 475 aaPredicted RBP1.21□□□□□ -2.22
USH2A-204ENST00000481786 RNF2Q99496 336 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 SPIN2AQ99865 258 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 SPIN2BQ9BPZ2 258 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 MRPL20Q9BYC9 149 aaKnown RBP1.21□□□□□ -2.22
USH2A-204ENST00000481786 ZNF436Q9C0F3 470 aaPredicted RBP1.21□□□□□ -2.22
USH2A-204ENST00000481786 GPR84Q9NQS5 396 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 BABAM2Q9NXR7 383 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 GNG12Q9UBI6 72 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 SMPXQ9UHP9 88 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 GSTK1Q9Y2Q3 226 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 WASHC3Q9Y3C0 194 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 S4R3C0 116 aa1.21□□□□□ -2.22
USH2A-204ENST00000481786 IGKV3-7A0A075B6H7 116 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 IGKV1-27A0A075B6S5 117 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 TRAV26-1A0A087WT03 109 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 IGHV3-43A0A0B4J1X8 118 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 TMEM269A0A1B0GVZ9 245 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 EVPLLA8MZ36 301 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 C9JCJ5 164 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 H0YJX3 145 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 DNASE2O00115 360 aaPredicted RBP1.2□□□□□ -2.22
USH2A-204ENST00000481786 NDUFA4O00483 81 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 ADAP1O75689 374 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 SULT1C4O75897 302 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 ZNF682O95780 498 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 DHFRP00374 187 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 SERPINA3P01011 423 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 PRH1P02810 166 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 SAA2P0DJI9 122 aaPredicted RBP1.2□□□□□ -2.22
USH2A-204ENST00000481786 APELAP0DMC3 54 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 IGHV3-43DP0DP04 118 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 DEFB130BP0DP73 79 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 DEFB130AP0DP74 79 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 CALCBP10092 127 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 EVI2AP22794 236 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 RBP2P50120 134 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 PLTPP55058 493 aa1.2□□□□□ -2.22
USH2A-204ENST00000481786 FXYD6P3P58550 94 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms