RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 RAB3DO95716 219 aa16.52■□□□□ 0.24
GPCPD1-206ENST00000481690 IFNA17P01571 189 aa16.52■□□□□ 0.24
GPCPD1-206ENST00000481690 ODF3L2Q3SX64 289 aa16.52■□□□□ 0.24
GPCPD1-206ENST00000481690 SP6Q3SY56 376 aa16.52■□□□□ 0.24
GPCPD1-206ENST00000481690 TMEM229BQ8NBD8 167 aa16.52■□□□□ 0.24
GPCPD1-206ENST00000481690 OR13C8Q8NGS7 320 aa16.52■□□□□ 0.24
GPCPD1-206ENST00000481690 RNASE11Q8TAA1 199 aaKnown RBP16.52■□□□□ 0.24
GPCPD1-206ENST00000481690 ZFAND1Q8TCF1 268 aa16.52■□□□□ 0.24
GPCPD1-206ENST00000481690 TXN2Q99757 166 aa16.52■□□□□ 0.24
GPCPD1-206ENST00000481690 MIXL1Q9H2W2 232 aa16.52■□□□□ 0.24
GPCPD1-206ENST00000481690 SMPXQ9UHP9 88 aa16.52■□□□□ 0.24
GPCPD1-206ENST00000481690 STARD9Q9P2P6 4700 aa16.52■□□□□ 0.24
GPCPD1-206ENST00000481690 IGHV7-4-1A0A0J9YVY3 117 aa16.51■□□□□ 0.23
GPCPD1-206ENST00000481690 ST8SIA3O43173 380 aa16.51■□□□□ 0.23
GPCPD1-206ENST00000481690 SNCAP37840 140 aa16.51■□□□□ 0.23
GPCPD1-206ENST00000481690 APOC4P55056 127 aa16.51■□□□□ 0.23
GPCPD1-206ENST00000481690 STEAP1BQ6NZ63 245 aa16.51■□□□□ 0.23
GPCPD1-206ENST00000481690 TMEM116Q8NCL8 245 aa16.51■□□□□ 0.23
GPCPD1-206ENST00000481690 TERB2Q8NHR7 220 aa16.51■□□□□ 0.23
GPCPD1-206ENST00000481690 MARCH1Q8TCQ1 289 aa16.51■□□□□ 0.23
GPCPD1-206ENST00000481690 ZNF414Q96IQ9 312 aa16.51■□□□□ 0.23
GPCPD1-206ENST00000481690 RNF2Q99496 336 aa16.51■□□□□ 0.23
GPCPD1-206ENST00000481690 RHPN1-AS1Q9BWJ2 59 aa16.51■□□□□ 0.23
GPCPD1-206ENST00000481690 NXF2Q9GZY0 626 aaKnown RBP16.51■□□□□ 0.23
GPCPD1-206ENST00000481690 CD74P04233 296 aa16.5■□□□□ 0.23
GPCPD1-206ENST00000481690 FCGR2BP31994 310 aaPredicted RBP16.5■□□□□ 0.23
GPCPD1-206ENST00000481690 HOXA1P49639 335 aaPredicted RBP16.5■□□□□ 0.23
GPCPD1-206ENST00000481690 SPCS2Q15005 226 aa16.5■□□□□ 0.23
GPCPD1-206ENST00000481690 FAAP20Q6NZ36 180 aa16.5■□□□□ 0.23
GPCPD1-206ENST00000481690 RYR2Q92736 4967 aa16.5■□□□□ 0.23
GPCPD1-206ENST00000481690 IGKV3-7A0A075B6H7 116 aa16.49■□□□□ 0.23
GPCPD1-206ENST00000481690 IGHV3OR16-13A0A075B7E8 117 aa16.49■□□□□ 0.23
GPCPD1-206ENST00000481690 IGHV3-74A0A0B4J1X5 117 aa16.49■□□□□ 0.23
GPCPD1-206ENST00000481690 A0A0B4J293 547 aa16.49■□□□□ 0.23
GPCPD1-206ENST00000481690 GABARAPH6UMI1 98 aa16.49■□□□□ 0.23
GPCPD1-206ENST00000481690 CHEK1O14757 476 aa16.49■□□□□ 0.23
GPCPD1-206ENST00000481690 JTBO76095 146 aa16.49■□□□□ 0.23
GPCPD1-206ENST00000481690 P0C879 139 aa16.49■□□□□ 0.23
GPCPD1-206ENST00000481690 TFPI2P48307 235 aa16.49■□□□□ 0.23
GPCPD1-206ENST00000481690 DEFB135Q30KP9 77 aa16.49■□□□□ 0.23
GPCPD1-206ENST00000481690 DUSP18Q8NEJ0 188 aa16.49■□□□□ 0.23
GPCPD1-206ENST00000481690 RRNAD1Q96FB5 475 aaKnown RBP16.49■□□□□ 0.23
GPCPD1-206ENST00000481690 OR10C1Q96KK4 312 aa16.49■□□□□ 0.23
GPCPD1-206ENST00000481690 ENY2Q9NPA8 101 aa16.49■□□□□ 0.23
GPCPD1-206ENST00000481690 TRAV14DV4A0A0A6YYC5 116 aa16.48■□□□□ 0.23
GPCPD1-206ENST00000481690 CTDSP2O14595 271 aa16.48■□□□□ 0.23
GPCPD1-206ENST00000481690 RPL35AP18077 110 aaKnown RBP16.48■□□□□ 0.23
GPCPD1-206ENST00000481690 NPBWR1P48145 328 aa16.48■□□□□ 0.23
GPCPD1-206ENST00000481690 ALDH3B2P48448 385 aa16.48■□□□□ 0.23
GPCPD1-206ENST00000481690 C14orf166Q9Y224 244 aaKnown RBP16.48■□□□□ 0.23
GPCPD1-206ENST00000481690 UCP1P25874 307 aa16.47■□□□□ 0.23
GPCPD1-206ENST00000481690 ETV6P41212 452 aa16.47■□□□□ 0.23
GPCPD1-206ENST00000481690 SUB1P53999 127 aaKnown RBP eCLIP16.47■□□□□ 0.23
GPCPD1-206ENST00000481690 MEF2DQ14814 521 aa16.47■□□□□ 0.23
GPCPD1-206ENST00000481690 CLVS1Q8IUQ0 354 aaPredicted RBP16.47■□□□□ 0.23
GPCPD1-206ENST00000481690 GINS3Q9BRX5 216 aa16.47■□□□□ 0.23
GPCPD1-206ENST00000481690 A0A0G2JRQ6 117 aa16.46■□□□□ 0.23
GPCPD1-206ENST00000481690 SPRY2O43597 315 aa16.46■□□□□ 0.23
GPCPD1-206ENST00000481690 MRPS10P82664 201 aaKnown RBP16.46■□□□□ 0.23
GPCPD1-206ENST00000481690 SSBP1Q04837 148 aaKnown RBP16.46■□□□□ 0.23
GPCPD1-206ENST00000481690 IL18Q14116 193 aa16.46■□□□□ 0.23
GPCPD1-206ENST00000481690 APRG1Q8IVJ8 170 aa16.46■□□□□ 0.23
GPCPD1-206ENST00000481690 GBGT1Q8N5D6 347 aa16.46■□□□□ 0.23
GPCPD1-206ENST00000481690 STPG3Q8N7X2 389 aa16.46■□□□□ 0.23
GPCPD1-206ENST00000481690 TEX13DA0A0J9YY54 714 aaPredicted RBP16.45■□□□□ 0.22
GPCPD1-206ENST00000481690 DISC1C4P0D8 188 aa16.45■□□□□ 0.22
GPCPD1-206ENST00000481690 INS-IGF2F8WCM5 200 aa16.45■□□□□ 0.22
GPCPD1-206ENST00000481690 CORTO00230 105 aa16.45■□□□□ 0.22
GPCPD1-206ENST00000481690 B3GALNT1O75752 331 aa16.45■□□□□ 0.22
GPCPD1-206ENST00000481690 OR5AC1P0C628 307 aa16.45■□□□□ 0.22
GPCPD1-206ENST00000481690 RNASE2P10153 161 aaKnown RBP16.45■□□□□ 0.22
GPCPD1-206ENST00000481690 TOMM20LQ6UXN7 152 aa16.45■□□□□ 0.22
GPCPD1-206ENST00000481690 Q6ZWC4 215 aa16.45■□□□□ 0.22
GPCPD1-206ENST00000481690 SMIM4Q8WVI0 70 aa16.45■□□□□ 0.22
GPCPD1-206ENST00000481690 GALNT14Q96FL9 552 aa16.45■□□□□ 0.22
GPCPD1-206ENST00000481690 PUS1Q9Y606 427 aaKnown RBP eCLIP16.45■□□□□ 0.22
GPCPD1-206ENST00000481690 SACSQ9NZJ4 4579 aa16.44■□□□□ 0.22
GPCPD1-206ENST00000481690 A0A0J9YWU9 116 aa16.44■□□□□ 0.22
GPCPD1-206ENST00000481690 UBE2CO00762 179 aa16.44■□□□□ 0.22
GPCPD1-206ENST00000481690 BMI1P35226 326 aa16.44■□□□□ 0.22
GPCPD1-206ENST00000481690 ZNF124Q15973 351 aa16.44■□□□□ 0.22
GPCPD1-206ENST00000481690 ZNF600Q6ZNG1 722 aa16.44■□□□□ 0.22
GPCPD1-206ENST00000481690 DIRAS2Q96HU8 199 aa16.44■□□□□ 0.22
GPCPD1-206ENST00000481690 C6orf62Q9GZU0 229 aaPredicted RBP16.44■□□□□ 0.22
GPCPD1-206ENST00000481690 NAA60Q9H7X0 242 aa16.44■□□□□ 0.22
GPCPD1-206ENST00000481690 TP53TG1Q9Y2A0 90 aa16.44■□□□□ 0.22
GPCPD1-206ENST00000481690 IGHV3-66A0A0C4DH42 116 aa16.43■□□□□ 0.22
GPCPD1-206ENST00000481690 KIR2DL5BA0A0G2JN68 375 aa16.43■□□□□ 0.22
GPCPD1-206ENST00000481690 KIR2DL5BA0A0G2JPC4 375 aa16.43■□□□□ 0.22
GPCPD1-206ENST00000481690 OPRK1P41145 380 aa16.43■□□□□ 0.22
GPCPD1-206ENST00000481690 PMS2P11Q13670 270 aa16.43■□□□□ 0.22
GPCPD1-206ENST00000481690 TCF24Q7RTU0 167 aa16.43■□□□□ 0.22
GPCPD1-206ENST00000481690 LYG2Q86SG7 212 aa16.43■□□□□ 0.22
GPCPD1-206ENST00000481690 WFDC3Q8IUB2 231 aa16.43■□□□□ 0.22
GPCPD1-206ENST00000481690 KIR2DL5AQ8N109 375 aa16.43■□□□□ 0.22
GPCPD1-206ENST00000481690 OR4C16Q8NGL9 310 aa16.43■□□□□ 0.22
GPCPD1-206ENST00000481690 KIR2DL5BQ8NHK3 375 aa16.43■□□□□ 0.22
GPCPD1-206ENST00000481690 RAB2BQ8WUD1 216 aa16.43■□□□□ 0.22
GPCPD1-206ENST00000481690 ST8SIA2Q92186 375 aa16.43■□□□□ 0.22
GPCPD1-206ENST00000481690 TMEM222Q9H0R3 208 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms