RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 RELQ04864 619 aaPredicted RBP11.31□□□□□ -0.6
LIMS3-203ENST00000480744 Q6ZWC4 215 aa11.31□□□□□ -0.6
LIMS3-203ENST00000480744 LYG2Q86SG7 212 aa11.31□□□□□ -0.6
LIMS3-203ENST00000480744 STPG3Q8N7X2 389 aa11.31□□□□□ -0.6
LIMS3-203ENST00000480744 PINX1Q96BK5 328 aaKnown RBP11.31□□□□□ -0.6
LIMS3-203ENST00000480744 FAM212BQ9NTI7 297 aaPredicted RBP11.31□□□□□ -0.6
LIMS3-203ENST00000480744 MTFP1Q9UDX5 166 aa11.31□□□□□ -0.6
LIMS3-203ENST00000480744 SMPXQ9UHP9 88 aa11.31□□□□□ -0.6
LIMS3-203ENST00000480744 IGKV3-7A0A075B6H7 116 aa11.3□□□□□ -0.6
LIMS3-203ENST00000480744 IGHV7-4-1A0A0J9YVY3 117 aa11.3□□□□□ -0.6
LIMS3-203ENST00000480744 I3L2K1 104 aa11.3□□□□□ -0.6
LIMS3-203ENST00000480744 UBE2CO00762 179 aa11.3□□□□□ -0.6
LIMS3-203ENST00000480744 MT-CO2P00403 227 aa11.3□□□□□ -0.6
LIMS3-203ENST00000480744 IGKV1-39P01597 117 aa11.3□□□□□ -0.6
LIMS3-203ENST00000480744 CD3DP04234 171 aa11.3□□□□□ -0.6
LIMS3-203ENST00000480744 IGKV1D-39P04432 117 aa11.3□□□□□ -0.6
LIMS3-203ENST00000480744 PGAM2P15259 253 aa11.3□□□□□ -0.6
LIMS3-203ENST00000480744 BMI1P35226 326 aa11.3□□□□□ -0.6
LIMS3-203ENST00000480744 PRCDQ00LT1 54 aa11.3□□□□□ -0.6
LIMS3-203ENST00000480744 SPINK9Q5DT21 86 aa11.3□□□□□ -0.6
LIMS3-203ENST00000480744 TMEM116Q8NCL8 245 aa11.3□□□□□ -0.6
LIMS3-203ENST00000480744 OR4D10Q8NGI6 311 aa11.3□□□□□ -0.6
LIMS3-203ENST00000480744 SMIM4Q8WVI0 70 aa11.3□□□□□ -0.6
LIMS3-203ENST00000480744 RNF2Q99496 336 aa11.3□□□□□ -0.6
LIMS3-203ENST00000480744 RHPN1-AS1Q9BWJ2 59 aa11.3□□□□□ -0.6
LIMS3-203ENST00000480744 TP53TG1Q9Y2A0 90 aa11.3□□□□□ -0.6
LIMS3-203ENST00000480744 IGHV3OR16-13A0A075B7E8 117 aa11.29□□□□□ -0.6
LIMS3-203ENST00000480744 IGHV3-74A0A0B4J1X5 117 aa11.29□□□□□ -0.6
LIMS3-203ENST00000480744 GABARAPH6UMI1 98 aa11.29□□□□□ -0.6
LIMS3-203ENST00000480744 CHEK1O14757 476 aa11.29□□□□□ -0.6
LIMS3-203ENST00000480744 GNG7O60262 68 aa11.29□□□□□ -0.6
LIMS3-203ENST00000480744 PI3P19957 117 aa11.29□□□□□ -0.6
LIMS3-203ENST00000480744 UCP3P55916 312 aa11.29□□□□□ -0.6
LIMS3-203ENST00000480744 HSPE1P61604 102 aaKnown RBP11.29□□□□□ -0.6
LIMS3-203ENST00000480744 EWSR1Q01844 656 aaKnown RBP eCLIP11.29□□□□□ -0.6
LIMS3-203ENST00000480744 IL18Q14116 193 aa11.29□□□□□ -0.6
LIMS3-203ENST00000480744 IZUMO4Q1ZYL8 232 aa11.29□□□□□ -0.6
LIMS3-203ENST00000480744 WFDC3Q8IUB2 231 aa11.29□□□□□ -0.6
LIMS3-203ENST00000480744 APRG1Q8IVJ8 170 aa11.29□□□□□ -0.6
LIMS3-203ENST00000480744 GALNT14Q96FL9 552 aa11.29□□□□□ -0.6
LIMS3-203ENST00000480744 V9GYH0 126 aa11.29□□□□□ -0.6
LIMS3-203ENST00000480744 KIR2DL5BA0A0G2JN68 375 aa11.28□□□□□ -0.6
LIMS3-203ENST00000480744 KIR2DL5BA0A0G2JPC4 375 aa11.28□□□□□ -0.6
LIMS3-203ENST00000480744 CTDSPLO15194 276 aa11.28□□□□□ -0.6
LIMS3-203ENST00000480744 ERHP84090 104 aaKnown RBP11.28□□□□□ -0.6
LIMS3-203ENST00000480744 TNFRSF9Q07011 255 aa11.28□□□□□ -0.6
LIMS3-203ENST00000480744 ZNF124Q15973 351 aa11.28□□□□□ -0.6
LIMS3-203ENST00000480744 KIR2DL5AQ8N109 375 aa11.28□□□□□ -0.6
LIMS3-203ENST00000480744 ZNF114Q8NC26 417 aa11.28□□□□□ -0.6
LIMS3-203ENST00000480744 KIR2DL5BQ8NHK3 375 aa11.28□□□□□ -0.6
LIMS3-203ENST00000480744 RNF183Q96D59 192 aa11.28□□□□□ -0.6
LIMS3-203ENST00000480744 ZNF414Q96IQ9 312 aa11.28□□□□□ -0.6
LIMS3-203ENST00000480744 TXN2Q99757 166 aa11.28□□□□□ -0.6
LIMS3-203ENST00000480744 TRAV14DV4A0A0A6YYC5 116 aa11.27□□□□□ -0.61
LIMS3-203ENST00000480744 NUPR2A6NF83 97 aa11.27□□□□□ -0.61
LIMS3-203ENST00000480744 LY6G6CO95867 125 aa11.27□□□□□ -0.61
LIMS3-203ENST00000480744 CD74P04233 296 aa11.27□□□□□ -0.61
LIMS3-203ENST00000480744 AKR1C2P52895 323 aa11.27□□□□□ -0.61
LIMS3-203ENST00000480744 ZNF79Q15937 498 aa11.27□□□□□ -0.61
LIMS3-203ENST00000480744 RNASE10Q5GAN6 216 aaKnown RBP11.27□□□□□ -0.61
LIMS3-203ENST00000480744 FAAP20Q6NZ36 180 aa11.27□□□□□ -0.61
LIMS3-203ENST00000480744 CCDC190Q86UF4 302 aa11.27□□□□□ -0.61
LIMS3-203ENST00000480744 GBGT1Q8N5D6 347 aa11.27□□□□□ -0.61
LIMS3-203ENST00000480744 SLC35G3Q8N808 338 aa11.27□□□□□ -0.61
LIMS3-203ENST00000480744 LINC00476Q8WZB0 136 aa11.27□□□□□ -0.61
LIMS3-203ENST00000480744 MAP6D1Q9H9H5 199 aa11.27□□□□□ -0.61
LIMS3-203ENST00000480744 GSTZ1O43708 216 aaPredicted RBP11.26□□□□□ -0.61
LIMS3-203ENST00000480744 FCGR2BP31994 310 aaPredicted RBP11.26□□□□□ -0.61
LIMS3-203ENST00000480744 SNCAP37840 140 aa11.26□□□□□ -0.61
LIMS3-203ENST00000480744 PPP5CP53041 499 aa11.26□□□□□ -0.61
LIMS3-203ENST00000480744 PIGPP57054 158 aa11.26□□□□□ -0.61
LIMS3-203ENST00000480744 MRPS10P82664 201 aaKnown RBP11.26□□□□□ -0.61
LIMS3-203ENST00000480744 LHFPL1Q86WI0 220 aa11.26□□□□□ -0.61
LIMS3-203ENST00000480744 TMEM229BQ8NBD8 167 aa11.26□□□□□ -0.61
LIMS3-203ENST00000480744 C15orf40Q8WUR7 153 aa11.26□□□□□ -0.61
LIMS3-203ENST00000480744 OR10C1Q96KK4 312 aa11.26□□□□□ -0.61
LIMS3-203ENST00000480744 TP53RKQ96S44 253 aa11.26□□□□□ -0.61
LIMS3-203ENST00000480744 GINS3Q9BRX5 216 aa11.26□□□□□ -0.61
LIMS3-203ENST00000480744 FABP12A6NFH5 140 aa11.25□□□□□ -0.61
LIMS3-203ENST00000480744 IFNA17P01571 189 aa11.25□□□□□ -0.61
LIMS3-203ENST00000480744 IGKV1-5P01602 117 aa11.25□□□□□ -0.61
LIMS3-203ENST00000480744 NPBWR1P48145 328 aa11.25□□□□□ -0.61
LIMS3-203ENST00000480744 CMC4P56277 68 aaPredicted RBP11.25□□□□□ -0.61
LIMS3-203ENST00000480744 RND3P61587 244 aa11.25□□□□□ -0.61
LIMS3-203ENST00000480744 TRIM16LQ309B1 348 aa11.25□□□□□ -0.61
LIMS3-203ENST00000480744 STEAP1BQ6NZ63 245 aa11.25□□□□□ -0.61
LIMS3-203ENST00000480744 CEMP1Q6PRD7 247 aaPredicted RBP11.25□□□□□ -0.61
LIMS3-203ENST00000480744 TCF24Q7RTU0 167 aa11.25□□□□□ -0.61
LIMS3-203ENST00000480744 TMEM217Q8N7C4 229 aa11.25□□□□□ -0.61
LIMS3-203ENST00000480744 DUSP18Q8NEJ0 188 aa11.25□□□□□ -0.61
LIMS3-203ENST00000480744 TRIM63Q969Q1 353 aa11.25□□□□□ -0.61
LIMS3-203ENST00000480744 ZNF486Q96H40 463 aaPredicted RBP11.25□□□□□ -0.61
LIMS3-203ENST00000480744 PDCD10Q9BUL8 212 aa11.25□□□□□ -0.61
LIMS3-203ENST00000480744 NDUFA13Q9P0J0 144 aa11.25□□□□□ -0.61
LIMS3-203ENST00000480744 IGHV3-66A0A0C4DH42 116 aa11.24□□□□□ -0.61
LIMS3-203ENST00000480744 C3orf85A0A1B0GTC6 90 aa11.24□□□□□ -0.61
LIMS3-203ENST00000480744 ST8SIA3O43173 380 aa11.24□□□□□ -0.61
LIMS3-203ENST00000480744 ATG12O94817 140 aa11.24□□□□□ -0.61
LIMS3-203ENST00000480744 TBPP20226 339 aa11.24□□□□□ -0.61
LIMS3-203ENST00000480744 HOXA1P49639 335 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms