RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 TPM3P06753 285 aa0.72□□□□□ -2.29
CALD1-219ENST00000480638 RNASE3P12724 160 aaKnown RBP0.72□□□□□ -2.29
CALD1-219ENST00000480638 MAP3K7CLP57077 242 aa0.72□□□□□ -2.29
CALD1-219ENST00000480638 POLR2GP62487 172 aaKnown RBP eCLIP0.72□□□□□ -2.29
CALD1-219ENST00000480638 TPM4P67936 248 aa0.72□□□□□ -2.29
CALD1-219ENST00000480638 MGAT3Q09327 533 aa0.72□□□□□ -2.29
CALD1-219ENST00000480638 COTL1Q14019 142 aa0.72□□□□□ -2.29
CALD1-219ENST00000480638 FAM78BQ5VT40 261 aa0.72□□□□□ -2.29
CALD1-219ENST00000480638 DEFB132Q7Z7B7 95 aa0.72□□□□□ -2.29
CALD1-219ENST00000480638 MED12LQ86YW9 2145 aa0.72□□□□□ -2.29
CALD1-219ENST00000480638 OR1M1Q8NGA1 313 aa0.72□□□□□ -2.29
CALD1-219ENST00000480638 JOSD2Q8TAC2 188 aa0.72□□□□□ -2.29
CALD1-219ENST00000480638 DHRS9Q9BPW9 319 aa0.72□□□□□ -2.29
CALD1-219ENST00000480638 DCUN1D5Q9BTE7 237 aa0.72□□□□□ -2.29
CALD1-219ENST00000480638 PARD6GQ9BYG4 376 aaPredicted RBP0.72□□□□□ -2.29
CALD1-219ENST00000480638 PLEKHJ1Q9NW61 149 aa0.72□□□□□ -2.29
CALD1-219ENST00000480638 V9GYY5 206 aaPredicted RBP0.72□□□□□ -2.29
CALD1-219ENST00000480638 SPTBN2O15020 2390 aa0.72□□□□□ -2.29
CALD1-219ENST00000480638 SPENQ96T58 3664 aaKnown RBP0.71□□□□□ -2.3
CALD1-219ENST00000480638 VPS13CQ709C8 3753 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 NWD1Q149M9 1564 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 CHD7Q9P2D1 2997 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 GOLGA8KD6RF30 607 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 GOLGA8MH3BSY2 632 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 LST1O00453 97 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 BIRC5O15392 142 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 KRT75O95678 551 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 HLA-DRAP01903 254 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 SULT1A3P0DMM9 295 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 SULT1A4P0DMN0 295 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 COX5BP10606 129 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 HLA-DMBP28068 263 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 CDC34P49427 236 aaPredicted RBP0.71□□□□□ -2.3
CALD1-219ENST00000480638 RAB13P51153 203 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 NDUFA5Q16718 116 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 PLEKHG7Q6ZR37 379 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 TMEM251Q8N6I4 163 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 C12orf29Q8N999 325 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 ZNF565Q8N9K5 539 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 ZNF439Q8NDP4 499 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 HDHD2Q9H0R4 259 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 RSL24D1Q9UHA3 163 aaKnown RBP0.71□□□□□ -2.3
CALD1-219ENST00000480638 AK3Q9UIJ7 227 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 BAIAP2Q9UQB8 552 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 ADGRG4Q8IZF6 3080 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 ZCCHC6Q5VYS8 1495 aaKnown RBP0.71□□□□□ -2.3
CALD1-219ENST00000480638 CSMD2Q7Z408 3487 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 KIAA0556O60303 1618 aa0.71□□□□□ -2.3
CALD1-219ENST00000480638 RB1CC1Q8TDY2 1594 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 ALPK2Q86TB3 2170 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 CACNA1HO95180 2353 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 SRRM2Q9UQ35 2752 aaKnown RBP0.7□□□□□ -2.3
CALD1-219ENST00000480638 IRGMA1A4Y4 181 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 TMEM212A6NML5 194 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 I3L521 148 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 SLC22A1O15245 554 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 NIPSNAP2O75323 286 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 PMP2P02689 132 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 REG1AP05451 166 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 IL3P08700 152 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 OCMP0CE72 109 aaPredicted RBP0.7□□□□□ -2.3
CALD1-219ENST00000480638 MAGEA2P43356 314 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 FXYD2P54710 66 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 MYL6P60660 151 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 TNFAIP6P98066 277 aaPredicted RBP0.7□□□□□ -2.3
CALD1-219ENST00000480638 MLLT11Q13015 90 aaPredicted RBP0.7□□□□□ -2.3
CALD1-219ENST00000480638 ZNF345Q14585 488 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 FAM151BQ6UXP7 276 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 DEFB123Q8N688 67 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 OR5B17Q8NGF7 314 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 ANKRD7Q92527 254 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 SERPINI1Q99574 410 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 YIPF3Q9GZM5 350 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 TRABDQ9H4I3 376 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 BLMP54132 1417 aaPredicted RBP0.7□□□□□ -2.3
CALD1-219ENST00000480638 DMDP11532 3685 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 SMARCA2P51531 1590 aa0.7□□□□□ -2.3
CALD1-219ENST00000480638 EHBP1L1Q8N3D4 1523 aa0.69□□□□□ -2.3
CALD1-219ENST00000480638 A0A0A6YYH2 397 aa0.69□□□□□ -2.3
CALD1-219ENST00000480638 IGHV1-69-2A0A0G2JMI3 117 aa0.69□□□□□ -2.3
CALD1-219ENST00000480638 A6NJ64 397 aa0.69□□□□□ -2.3
CALD1-219ENST00000480638 CCL1P22362 96 aa0.69□□□□□ -2.3
CALD1-219ENST00000480638 S100A7P31151 101 aa0.69□□□□□ -2.3
CALD1-219ENST00000480638 BLVRAP53004 296 aa0.69□□□□□ -2.3
CALD1-219ENST00000480638 MED21Q13503 144 aa0.69□□□□□ -2.3
CALD1-219ENST00000480638 KRTAP20-1Q3LI63 56 aa0.69□□□□□ -2.3
CALD1-219ENST00000480638 TNFAIP8L2Q6P589 184 aaPredicted RBP0.69□□□□□ -2.3
CALD1-219ENST00000480638 C5orf46Q6UWT4 87 aa0.69□□□□□ -2.3
CALD1-219ENST00000480638 HIST2H3AQ71DI3 136 aa0.69□□□□□ -2.3
CALD1-219ENST00000480638 CMTM5Q96DZ9 223 aa0.69□□□□□ -2.3
CALD1-219ENST00000480638 ARL5BQ96KC2 179 aa0.69□□□□□ -2.3
CALD1-219ENST00000480638 KCTD7Q96MP8 289 aa0.69□□□□□ -2.3
CALD1-219ENST00000480638 PARVGQ9HBI0 331 aa0.69□□□□□ -2.3
CALD1-219ENST00000480638 TACC2O95359 2948 aa0.69□□□□□ -2.3
CALD1-219ENST00000480638 ADCY9O60503 1353 aa0.69□□□□□ -2.3
CALD1-219ENST00000480638 MAPKBP1O60336 1514 aa0.69□□□□□ -2.3
CALD1-219ENST00000480638 DLC1Q96QB1 1528 aa0.69□□□□□ -2.3
CALD1-219ENST00000480638 EXPH5Q8NEV8 1989 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 F8P00451 2351 aa0.68□□□□□ -2.3
CALD1-219ENST00000480638 EVPLLA8MZ36 301 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms