RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 C19orf54Q5BKX5 351 aa13.81□□□□□ -0.2
UPF3A-206ENST00000480362 LILRB2Q8N423 598 aa13.81□□□□□ -0.2
UPF3A-206ENST00000480362 FAM110DQ8TAY7 271 aaPredicted RBP13.81□□□□□ -0.2
UPF3A-206ENST00000480362 ZNF702PQ9H963 129 aa13.81□□□□□ -0.2
UPF3A-206ENST00000480362 CYTL1Q9NRR1 136 aa13.81□□□□□ -0.2
UPF3A-206ENST00000480362 DMRT1Q9Y5R6 373 aa13.81□□□□□ -0.2
UPF3A-206ENST00000480362 FAM181BA6NEQ2 426 aa13.8□□□□□ -0.2
UPF3A-206ENST00000480362 PRH1P02810 166 aa13.8□□□□□ -0.2
UPF3A-206ENST00000480362 RNASE1P07998 156 aaKnown RBP13.8□□□□□ -0.2
UPF3A-206ENST00000480362 MLANAQ16655 118 aa13.8□□□□□ -0.2
UPF3A-206ENST00000480362 ARSJQ5FYB0 599 aaPredicted RBP13.8□□□□□ -0.2
UPF3A-206ENST00000480362 RPL7L1Q6DKI1 246 aaKnown RBP13.8□□□□□ -0.2
UPF3A-206ENST00000480362 OR1L6Q8NGR2 347 aa13.8□□□□□ -0.2
UPF3A-206ENST00000480362 RNASEH2CQ8TDP1 164 aaKnown RBP13.8□□□□□ -0.2
UPF3A-206ENST00000480362 MISP3Q96FF7 219 aa13.8□□□□□ -0.2
UPF3A-206ENST00000480362 NOL4LQ96MY1 436 aaPredicted RBP13.8□□□□□ -0.2
UPF3A-206ENST00000480362 JMJD8Q96S16 334 aa13.8□□□□□ -0.2
UPF3A-206ENST00000480362 ATP5SQ99766 215 aa13.8□□□□□ -0.2
UPF3A-206ENST00000480362 ZNF471Q9BX82 626 aaPredicted RBP13.8□□□□□ -0.2
UPF3A-206ENST00000480362 UBA52P62987 128 aaKnown RBP13.79□□□□□ -0.2
UPF3A-206ENST00000480362 DLK1P80370 383 aa13.79□□□□□ -0.2
UPF3A-206ENST00000480362 TMEM95Q3KNT9 176 aa13.79□□□□□ -0.2
UPF3A-206ENST00000480362 FANCD2OSQ96PS1 177 aa13.79□□□□□ -0.2
UPF3A-206ENST00000480362 HIVEP1P15822 2718 aa13.78□□□□□ -0.2
UPF3A-206ENST00000480362 ZFHX3Q15911 3703 aa13.78□□□□□ -0.2
UPF3A-206ENST00000480362 BORCS7-ASMTA0A0B4J1R7 106 aa13.78□□□□□ -0.2
UPF3A-206ENST00000480362 CORTO00230 105 aa13.78□□□□□ -0.2
UPF3A-206ENST00000480362 DFFBO76075 338 aa13.78□□□□□ -0.2
UPF3A-206ENST00000480362 GPX4P36969 197 aaPredicted RBP13.78□□□□□ -0.2
UPF3A-206ENST00000480362 CD69Q07108 199 aa13.78□□□□□ -0.2
UPF3A-206ENST00000480362 SLC51BQ86UW2 128 aa13.78□□□□□ -0.2
UPF3A-206ENST00000480362 Q8N2B8 174 aa13.78□□□□□ -0.2
UPF3A-206ENST00000480362 TMEM147Q9BVK8 224 aa13.78□□□□□ -0.2
UPF3A-206ENST00000480362 GGACTQ9BVM4 153 aa13.78□□□□□ -0.2
UPF3A-206ENST00000480362 FNDC4Q9H6D8 234 aaPredicted RBP13.78□□□□□ -0.2
UPF3A-206ENST00000480362 ZNF355PQ9NSJ1 428 aa13.78□□□□□ -0.2
UPF3A-206ENST00000480362 ZNF580Q9UK33 172 aa13.78□□□□□ -0.2
UPF3A-206ENST00000480362 IGLV11-55A0A075B6I3 123 aa13.77□□□□□ -0.21
UPF3A-206ENST00000480362 CYB5BO43169 146 aa13.77□□□□□ -0.21
UPF3A-206ENST00000480362 SOX15O60248 233 aa13.77□□□□□ -0.21
UPF3A-206ENST00000480362 JTBO76095 146 aa13.77□□□□□ -0.21
UPF3A-206ENST00000480362 CRYBA1P05813 215 aa13.77□□□□□ -0.21
UPF3A-206ENST00000480362 OPRK1P41145 380 aa13.77□□□□□ -0.21
UPF3A-206ENST00000480362 VWC2Q2TAL6 325 aa13.77□□□□□ -0.21
UPF3A-206ENST00000480362 CACNG8Q8WXS5 425 aa13.77□□□□□ -0.21
UPF3A-206ENST00000480362 UQCC1Q9NVA1 299 aa13.77□□□□□ -0.21
UPF3A-206ENST00000480362 IGHV3-21A0A0B4J1V1 117 aa13.76□□□□□ -0.21
UPF3A-206ENST00000480362 SMCO3A2RU48 225 aa13.76□□□□□ -0.21
UPF3A-206ENST00000480362 TCF21O43680 179 aa13.76□□□□□ -0.21
UPF3A-206ENST00000480362 MT-CO2P00403 227 aa13.76□□□□□ -0.21
UPF3A-206ENST00000480362 IFNA5P01569 189 aa13.76□□□□□ -0.21
UPF3A-206ENST00000480362 HIST1H1BP16401 226 aaKnown RBP13.76□□□□□ -0.21
UPF3A-206ENST00000480362 PPIFP30405 207 aaKnown RBP13.76□□□□□ -0.21
UPF3A-206ENST00000480362 RPL15P61313 204 aaKnown RBP13.76□□□□□ -0.21
UPF3A-206ENST00000480362 EXOSC2Q13868 293 aaKnown RBP13.76□□□□□ -0.21
UPF3A-206ENST00000480362 ZNF266Q14584 549 aa13.76□□□□□ -0.21
UPF3A-206ENST00000480362 Q6ZSV7 163 aa13.76□□□□□ -0.21
UPF3A-206ENST00000480362 TAF15Q92804 592 aaKnown RBP eCLIP13.76□□□□□ -0.21
UPF3A-206ENST00000480362 UBE2L5PA0A1B0GUS4 154 aa13.75□□□□□ -0.21
UPF3A-206ENST00000480362 RPS10-NUDT3A0A1W2PQS6 291 aa13.75□□□□□ -0.21
UPF3A-206ENST00000480362 I3L2K1 104 aa13.75□□□□□ -0.21
UPF3A-206ENST00000480362 OR2J3O76001 311 aa13.75□□□□□ -0.21
UPF3A-206ENST00000480362 NDUFB8O95169 186 aa13.75□□□□□ -0.21
UPF3A-206ENST00000480362 IGHV3-48P01763 117 aa13.75□□□□□ -0.21
UPF3A-206ENST00000480362 GAMTQ14353 236 aa13.75□□□□□ -0.21
UPF3A-206ENST00000480362 KLK9Q2XQG4 91 aa13.75□□□□□ -0.21
UPF3A-206ENST00000480362 ETFRF1Q6IPR1 90 aa13.75□□□□□ -0.21
UPF3A-206ENST00000480362 SLC16A13Q7RTY0 426 aa13.75□□□□□ -0.21
UPF3A-206ENST00000480362 UBAC2Q8NBM4 344 aa13.75□□□□□ -0.21
UPF3A-206ENST00000480362 OR2T6Q8NHC8 308 aa13.75□□□□□ -0.21
UPF3A-206ENST00000480362 SCGB1C1Q8TD33 95 aa13.75□□□□□ -0.21
UPF3A-206ENST00000480362 SLC35E1Q96K37 410 aa13.75□□□□□ -0.21
UPF3A-206ENST00000480362 MS4A10Q96PG2 267 aa13.75□□□□□ -0.21
UPF3A-206ENST00000480362 NPVFQ9HCQ7 196 aa13.75□□□□□ -0.21
UPF3A-206ENST00000480362 THYN1Q9P016 225 aa13.75□□□□□ -0.21
UPF3A-206ENST00000480362 KLK9Q9UKQ9 250 aa13.75□□□□□ -0.21
UPF3A-206ENST00000480362 MXRA5Q9NR99 2828 aa13.74□□□□□ -0.21
UPF3A-206ENST00000480362 TRBV9A0A0B4J1U6 114 aa13.74□□□□□ -0.21
UPF3A-206ENST00000480362 FNDC10F2Z333 226 aa13.74□□□□□ -0.21
UPF3A-206ENST00000480362 K7EIM0 57 aa13.74□□□□□ -0.21
UPF3A-206ENST00000480362 TSPAN9O75954 239 aa13.74□□□□□ -0.21
UPF3A-206ENST00000480362 TPT1P13693 172 aaKnown RBP13.74□□□□□ -0.21
UPF3A-206ENST00000480362 EIF5AP63241 154 aaKnown RBP13.74□□□□□ -0.21
UPF3A-206ENST00000480362 CFHR3Q02985 330 aa13.74□□□□□ -0.21
UPF3A-206ENST00000480362 STOML3Q8TAV4 291 aa13.74□□□□□ -0.21
UPF3A-206ENST00000480362 ST8SIA2Q92186 375 aa13.74□□□□□ -0.21
UPF3A-206ENST00000480362 GON7Q9BXV9 100 aa13.74□□□□□ -0.21
UPF3A-206ENST00000480362 FBXL7Q9UJT9 491 aa13.74□□□□□ -0.21
UPF3A-206ENST00000480362 DEFA5Q01523 94 aa13.73□□□□□ -0.21
UPF3A-206ENST00000480362 AKR1C1Q04828 323 aa13.73□□□□□ -0.21
UPF3A-206ENST00000480362 TREML4Q6UXN2 200 aa13.73□□□□□ -0.21
UPF3A-206ENST00000480362 BAP18Q8IXM2 172 aa13.73□□□□□ -0.21
UPF3A-206ENST00000480362 HSD17B11Q8NBQ5 300 aa13.73□□□□□ -0.21
UPF3A-206ENST00000480362 NPIPB3Q92617 1050 aa13.73□□□□□ -0.21
UPF3A-206ENST00000480362 ACY3Q96HD9 319 aa13.73□□□□□ -0.21
UPF3A-206ENST00000480362 PARD6GQ9BYG4 376 aaPredicted RBP13.73□□□□□ -0.21
UPF3A-206ENST00000480362 WDR61Q9GZS3 305 aaKnown RBP13.73□□□□□ -0.21
UPF3A-206ENST00000480362 ARV1Q9H2C2 271 aa13.73□□□□□ -0.21
UPF3A-206ENST00000480362 SERTAD4Q9NUC0 356 aa13.73□□□□□ -0.21
UPF3A-206ENST00000480362 MRPL36Q9P0J6 103 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms