RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 FAM71E2Q8N5Q1 922 aa5.26□□□□□ -1.57
VCP-205ENST00000479300 SLC24A4Q8NFF2 622 aa5.26□□□□□ -1.57
VCP-205ENST00000479300 OR2T10Q8NGZ9 312 aa5.26□□□□□ -1.57
VCP-205ENST00000479300 CD300LFQ8TDQ1 290 aa5.26□□□□□ -1.57
VCP-205ENST00000479300 RASL11BQ9BPW5 248 aa5.26□□□□□ -1.57
VCP-205ENST00000479300 GINS3Q9BRX5 216 aa5.26□□□□□ -1.57
VCP-205ENST00000479300 C20orf24Q9BUV8 137 aa5.26□□□□□ -1.57
VCP-205ENST00000479300 EIF5A2Q9GZV4 153 aaKnown RBP5.26□□□□□ -1.57
VCP-205ENST00000479300 RIMS4Q9H426 269 aaPredicted RBP5.26□□□□□ -1.57
VCP-205ENST00000479300 TMEM242Q9NWH2 141 aa5.26□□□□□ -1.57
VCP-205ENST00000479300 OR5AC2Q9NZP5 309 aa5.26□□□□□ -1.57
VCP-205ENST00000479300 VAX2Q9UIW0 290 aa5.26□□□□□ -1.57
VCP-205ENST00000479300 CHTOPQ9Y3Y2 248 aaKnown RBP5.26□□□□□ -1.57
VCP-205ENST00000479300 U3KQK5 164 aa5.26□□□□□ -1.57
VCP-205ENST00000479300 TRBV24-1A0A075B6N3 115 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 TRAV8-7A0A075B6U6 113 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 C13orf42A0A1B0GVH6 325 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 SH2D7A6NKC9 451 aaPredicted RBP5.25□□□□□ -1.57
VCP-205ENST00000479300 AMBPP02760 352 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 TRGC2P03986 189 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 CXCL1P09341 107 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 NPSP0C0P6 89 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 OR5H8P0DN80 308 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 CGB3P0DN86 165 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 CGB7P0DN87 165 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 IGFBP3P17936 291 aaPredicted RBP5.25□□□□□ -1.57
VCP-205ENST00000479300 FUT3P21217 361 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 RPL12P30050 165 aaKnown RBP5.25□□□□□ -1.57
VCP-205ENST00000479300 TAGLN2P37802 199 aaKnown RBP5.25□□□□□ -1.57
VCP-205ENST00000479300 CDKN1BP46527 198 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 CAMLGP49069 296 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 UBE2KP61086 200 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 RPP30P78346 268 aaKnown RBP5.25□□□□□ -1.57
VCP-205ENST00000479300 ZNF816Q0VGE8 651 aaPredicted RBP5.25□□□□□ -1.57
VCP-205ENST00000479300 CASC10Q5T4H9 136 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 C1orf194Q5T5A4 169 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 GFI1BQ5VTD9 330 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 ZNF497Q6ZNH5 498 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 C18orf65Q6ZTR6 163 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 MRPL41Q8IXM3 137 aaKnown RBP5.25□□□□□ -1.57
VCP-205ENST00000479300 C8orf31Q8N9H6 132 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 OR10G4Q8NGN3 311 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 OR1P1Q8NH06 330 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 CASTOR1Q8WTX7 329 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 FRZBQ92765 325 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 MRGPRFQ96AM1 343 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 TVP23CQ96ET8 276 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 ACY3Q96HD9 319 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 FAM210BQ96KR6 192 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 ATG101Q9BSB4 218 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 MCRIP2Q9BUT9 160 aaKnown RBP5.25□□□□□ -1.57
VCP-205ENST00000479300 BANF2Q9H503 90 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 LINC00574Q9H8X3 128 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 FBXL17Q9UF56 701 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 ANAPC10Q9UM13 185 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 LSM4Q9Y4Z0 139 aaKnown RBP5.25□□□□□ -1.57
VCP-205ENST00000479300 STARD9Q9P2P6 4700 aa5.25□□□□□ -1.57
VCP-205ENST00000479300 HYDINQ4G0P3 5121 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 IGHV3-43A0A0B4J1X8 118 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 IGHV1-3A0A0C4DH29 117 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 A0A1W2PPI3 338 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 FAM90A9PA6NNJ1 464 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 C3orf84H3BNL1 204 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 H3BQ15 152 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 CYB5BO43169 146 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 MOSP00540 346 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 AMY1AP04745 511 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 HSPB1P04792 205 aaKnown RBP5.24□□□□□ -1.57
VCP-205ENST00000479300 IFNA6P05013 189 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 IGHV3-43DP0DP04 118 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 VDAC1P21796 283 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 CD1BP29016 333 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 FCGR2CP31995 323 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 P2RY1P47900 373 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 REG1BP48304 166 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 RANP62826 216 aaKnown RBP5.24□□□□□ -1.57
VCP-205ENST00000479300 PNRC1Q12796 327 aaPredicted RBP5.24□□□□□ -1.57
VCP-205ENST00000479300 RAB32Q13637 225 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 TMEM241Q24JQ0 296 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 CXorf66Q5JRM2 361 aaPredicted RBP5.24□□□□□ -1.57
VCP-205ENST00000479300 LINC00311Q8N616 119 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 C5orf56Q8N8D9 126 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 ADAD2Q8NCV1 583 aaKnown RBP5.24□□□□□ -1.57
VCP-205ENST00000479300 OR10V1Q8NGI7 309 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 UBALD1Q8TB05 177 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 ABHD5Q8WTS1 349 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 CTDSP1Q9GZU7 261 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 HIPK2Q9H2X6 1198 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 LIN7CQ9NUP9 197 aaKnown RBP5.24□□□□□ -1.57
VCP-205ENST00000479300 KIAA1456Q9P272 454 aa5.24□□□□□ -1.57
VCP-205ENST00000479300 PUS1Q9Y606 427 aaKnown RBP eCLIP5.24□□□□□ -1.57
VCP-205ENST00000479300 TGIF2-C20orf24A0A0A6YYL0 155 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 IGHV3-72A0A0B4J1Y9 119 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 LCE6AA0A183 80 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 A0A1W2PP11 408 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 RBFOX3A6NFN3 312 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 C12orf77C9JDV5 145 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 C15orf65H3BRN8 121 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 K7EP13 123 aa5.23□□□□□ -1.57
VCP-205ENST00000479300 PDCD6O75340 191 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms