RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 STRAPQ9Y3F4 350 aaKnown RBP10.21□□□□□ -0.77
CHD3-210ENST00000479080 U3KQ87 197 aa10.21□□□□□ -0.77
CHD3-210ENST00000479080 IGHV3-21A0A0B4J1V1 117 aa10.2□□□□□ -0.78
CHD3-210ENST00000479080 F8W735 103 aaPredicted RBP10.2□□□□□ -0.78
CHD3-210ENST00000479080 PFDN1O60925 122 aa10.2□□□□□ -0.78
CHD3-210ENST00000479080 CST7O76096 145 aa10.2□□□□□ -0.78
CHD3-210ENST00000479080 BRI3O95415 125 aa10.2□□□□□ -0.78
CHD3-210ENST00000479080 RLN2P04090 185 aa10.2□□□□□ -0.78
CHD3-210ENST00000479080 PET100P0DJ07 73 aa10.2□□□□□ -0.78
CHD3-210ENST00000479080 PVALBP20472 110 aaPredicted RBP10.2□□□□□ -0.78
CHD3-210ENST00000479080 PSMB8P28062 276 aa10.2□□□□□ -0.78
CHD3-210ENST00000479080 RPL12P30050 165 aaKnown RBP10.2□□□□□ -0.78
CHD3-210ENST00000479080 ZNF546Q86UE3 836 aa10.2□□□□□ -0.78
CHD3-210ENST00000479080 NOXA1Q86UR1 476 aa10.2□□□□□ -0.78
CHD3-210ENST00000479080 C9orf62Q8N4C0 152 aa10.2□□□□□ -0.78
CHD3-210ENST00000479080 OR2T6Q8NHC8 308 aa10.2□□□□□ -0.78
CHD3-210ENST00000479080 MYOZ3Q8TDC0 251 aa10.2□□□□□ -0.78
CHD3-210ENST00000479080 ZNF414Q96IQ9 312 aa10.2□□□□□ -0.78
CHD3-210ENST00000479080 MS4A10Q96PG2 267 aa10.2□□□□□ -0.78
CHD3-210ENST00000479080 HSPB11Q9Y547 144 aa10.2□□□□□ -0.78
CHD3-210ENST00000479080 MFSD2BA6NFX1 497 aa10.19□□□□□ -0.78
CHD3-210ENST00000479080 HMSDA8MTL9 139 aa10.19□□□□□ -0.78
CHD3-210ENST00000479080 ARPC5O15511 151 aa10.19□□□□□ -0.78
CHD3-210ENST00000479080 OR2J3O76001 311 aa10.19□□□□□ -0.78
CHD3-210ENST00000479080 LY86O95711 162 aa10.19□□□□□ -0.78
CHD3-210ENST00000479080 IGHV3-48P01763 117 aa10.19□□□□□ -0.78
CHD3-210ENST00000479080 CRYBA1P05813 215 aa10.19□□□□□ -0.78
CHD3-210ENST00000479080 EIF2B2P49770 351 aaKnown RBP10.19□□□□□ -0.78
CHD3-210ENST00000479080 LGALSLQ3ZCW2 172 aaPredicted RBP10.19□□□□□ -0.78
CHD3-210ENST00000479080 ZFP69Q49AA0 526 aa10.19□□□□□ -0.78
CHD3-210ENST00000479080 ARSJQ5FYB0 599 aaPredicted RBP10.19□□□□□ -0.78
CHD3-210ENST00000479080 ETV3LQ6ZN32 361 aa10.19□□□□□ -0.78
CHD3-210ENST00000479080 KLHDC1Q8N7A1 406 aa10.19□□□□□ -0.78
CHD3-210ENST00000479080 RNF152Q8N8N0 203 aa10.19□□□□□ -0.78
CHD3-210ENST00000479080 S4R3C0 116 aa10.19□□□□□ -0.78
CHD3-210ENST00000479080 PSMB11A5LHX3 300 aa10.18□□□□□ -0.78
CHD3-210ENST00000479080 MT-CO2P00403 227 aa10.18□□□□□ -0.78
CHD3-210ENST00000479080 OR8U8P0C7N1 319 aa10.18□□□□□ -0.78
CHD3-210ENST00000479080 SNCAP37840 140 aa10.18□□□□□ -0.78
CHD3-210ENST00000479080 SULT1A1P50225 295 aa10.18□□□□□ -0.78
CHD3-210ENST00000479080 RHOGP84095 191 aa10.18□□□□□ -0.78
CHD3-210ENST00000479080 CD69Q07108 199 aa10.18□□□□□ -0.78
CHD3-210ENST00000479080 OR8G2PQ6IF36 304 aa10.18□□□□□ -0.78
CHD3-210ENST00000479080 SLC25A24Q6NUK1 477 aa10.18□□□□□ -0.78
CHD3-210ENST00000479080 ACOT7LQ6ZUV0 252 aa10.18□□□□□ -0.78
CHD3-210ENST00000479080 MISP3Q96FF7 219 aa10.18□□□□□ -0.78
CHD3-210ENST00000479080 FBXL17Q9UF56 701 aa10.18□□□□□ -0.78
CHD3-210ENST00000479080 PAIP2BQ9ULR5 123 aaKnown RBP10.18□□□□□ -0.78
CHD3-210ENST00000479080 JMJD1CQ15652 2540 aa10.17□□□□□ -0.78
CHD3-210ENST00000479080 CLPSL1A2RUU4 121 aa10.17□□□□□ -0.78
CHD3-210ENST00000479080 H3BUA1 57 aa10.17□□□□□ -0.78
CHD3-210ENST00000479080 RPLP1P05386 114 aaKnown RBP10.17□□□□□ -0.78
CHD3-210ENST00000479080 SLC38A11Q08AI6 406 aa10.17□□□□□ -0.78
CHD3-210ENST00000479080 C18orf65Q6ZTR6 163 aa10.17□□□□□ -0.78
CHD3-210ENST00000479080 SLC16A13Q7RTY0 426 aa10.17□□□□□ -0.78
CHD3-210ENST00000479080 MRPL41Q8IXM3 137 aaKnown RBP10.17□□□□□ -0.78
CHD3-210ENST00000479080 KCNRGQ8N5I3 272 aa10.17□□□□□ -0.78
CHD3-210ENST00000479080 TMEM217Q8N7C4 229 aa10.17□□□□□ -0.78
CHD3-210ENST00000479080 RNASEH2CQ8TDP1 164 aaKnown RBP10.17□□□□□ -0.78
CHD3-210ENST00000479080 HYLS1Q96M11 299 aa10.17□□□□□ -0.78
CHD3-210ENST00000479080 CCDC140Q96MF4 163 aa10.17□□□□□ -0.78
CHD3-210ENST00000479080 SMIM3Q9BZL3 60 aa10.17□□□□□ -0.78
CHD3-210ENST00000479080 MFFQ9GZY8 342 aa10.17□□□□□ -0.78
CHD3-210ENST00000479080 CYTL1Q9NRR1 136 aa10.17□□□□□ -0.78
CHD3-210ENST00000479080 FBXL7Q9UJT9 491 aa10.17□□□□□ -0.78
CHD3-210ENST00000479080 BOLA1Q9Y3E2 137 aa10.17□□□□□ -0.78
CHD3-210ENST00000479080 FBN1P35555 2871 aaKnown RBP10.17□□□□□ -0.78
CHD3-210ENST00000479080 IGKV1OR2-108A0A075B7D4 117 aa10.16□□□□□ -0.78
CHD3-210ENST00000479080 TMEM89A2RUT3 159 aa10.16□□□□□ -0.78
CHD3-210ENST00000479080 IGHV3-23P01764 117 aa10.16□□□□□ -0.78
CHD3-210ENST00000479080 TRGV3P03979 118 aa10.16□□□□□ -0.78
CHD3-210ENST00000479080 IFNA4P05014 189 aa10.16□□□□□ -0.78
CHD3-210ENST00000479080 PF4V1P10720 104 aa10.16□□□□□ -0.78
CHD3-210ENST00000479080 CD28P10747 220 aa10.16□□□□□ -0.78
CHD3-210ENST00000479080 RAB9AP51151 201 aa10.16□□□□□ -0.78
CHD3-210ENST00000479080 AP2S1P53680 142 aaPredicted RBP10.16□□□□□ -0.78
CHD3-210ENST00000479080 ATP5IP56385 69 aaPredicted RBP10.16□□□□□ -0.78
CHD3-210ENST00000479080 BAXQ07812 192 aa10.16□□□□□ -0.78
CHD3-210ENST00000479080 FOXE3Q13461 319 aa10.16□□□□□ -0.78
CHD3-210ENST00000479080 GAMTQ14353 236 aa10.16□□□□□ -0.78
CHD3-210ENST00000479080 ZNF345Q14585 488 aa10.16□□□□□ -0.78
CHD3-210ENST00000479080 VWC2Q2TAL6 325 aa10.16□□□□□ -0.78
CHD3-210ENST00000479080 OR5C1Q8NGR4 320 aa10.16□□□□□ -0.78
CHD3-210ENST00000479080 OR4F5Q8NH21 305 aa10.16□□□□□ -0.78
CHD3-210ENST00000479080 SCARB1Q8WTV0 552 aa10.16□□□□□ -0.78
CHD3-210ENST00000479080 PINX1Q96BK5 328 aaKnown RBP10.16□□□□□ -0.78
CHD3-210ENST00000479080 SLC25A31Q9H0C2 315 aa10.16□□□□□ -0.78
CHD3-210ENST00000479080 GNB4Q9HAV0 340 aa10.16□□□□□ -0.78
CHD3-210ENST00000479080 RNF114Q9Y508 228 aa10.16□□□□□ -0.78
CHD3-210ENST00000479080 IGKV1D-37A0A075B6S9 117 aa10.15□□□□□ -0.78
CHD3-210ENST00000479080 ELANEP08246 267 aa10.15□□□□□ -0.78
CHD3-210ENST00000479080 DEFA4P12838 97 aa10.15□□□□□ -0.78
CHD3-210ENST00000479080 HIST1H1BP16401 226 aaKnown RBP10.15□□□□□ -0.78
CHD3-210ENST00000479080 SUB1P53999 127 aaKnown RBP eCLIP10.15□□□□□ -0.78
CHD3-210ENST00000479080 TPPP2P59282 170 aa10.15□□□□□ -0.78
CHD3-210ENST00000479080 RAB11AP62491 216 aa10.15□□□□□ -0.78
CHD3-210ENST00000479080 RPP30P78346 268 aaKnown RBP10.15□□□□□ -0.78
CHD3-210ENST00000479080 DLK1P80370 383 aa10.15□□□□□ -0.78
CHD3-210ENST00000479080 CLINT1Q14677 625 aa10.15□□□□□ -0.78
CHD3-210ENST00000479080 CENPVQ7Z7K6 275 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms