RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 FA2HQ7L5A8 372 aa17.43■□□□□ 0.38
SDF4-206ENST00000478938 C19orf24Q9BVV8 132 aa17.43■□□□□ 0.38
SDF4-206ENST00000478938 ASXL3Q9C0F0 2248 aa17.43■□□□□ 0.38
SDF4-206ENST00000478938 SPTY2D1-AS1A0A0U1RR47 76 aa17.43■□□□□ 0.38
SDF4-206ENST00000478938 A0A1B0GXF2 115 aa17.43■□□□□ 0.38
SDF4-206ENST00000478938 LINC00473A8K010 186 aa17.43■□□□□ 0.38
SDF4-206ENST00000478938 MOB1BQ7L9L4 216 aa17.43■□□□□ 0.38
SDF4-206ENST00000478938 LINC00596Q86U02 117 aa17.43■□□□□ 0.38
SDF4-206ENST00000478938 HSD17B10Q99714 261 aaKnown RBP17.43■□□□□ 0.38
SDF4-206ENST00000478938 FOXB1Q99853 325 aa17.43■□□□□ 0.38
SDF4-206ENST00000478938 SRXN1Q9BYN0 137 aa17.43■□□□□ 0.38
SDF4-206ENST00000478938 TMEM167BQ9NRX6 74 aa17.43■□□□□ 0.38
SDF4-206ENST00000478938 CELA3AP09093 270 aa17.42■□□□□ 0.38
SDF4-206ENST00000478938 C1orf53Q5VUE5 145 aa17.42■□□□□ 0.38
SDF4-206ENST00000478938 Q6P435 159 aa17.42■□□□□ 0.38
SDF4-206ENST00000478938 ANKRD37Q7Z713 158 aa17.42■□□□□ 0.38
SDF4-206ENST00000478938 BADQ92934 168 aa17.42■□□□□ 0.38
SDF4-206ENST00000478938 EYSQ5T1H1 3165 aa17.42■□□□□ 0.38
SDF4-206ENST00000478938 TMEM95Q3KNT9 176 aa17.41■□□□□ 0.38
SDF4-206ENST00000478938 TEPPQ6URK8 271 aa17.41■□□□□ 0.38
SDF4-206ENST00000478938 MRPL21Q7Z2W9 205 aaKnown RBP17.41■□□□□ 0.38
SDF4-206ENST00000478938 SPANXB1Q9NS25 103 aaPredicted RBP17.41■□□□□ 0.38
SDF4-206ENST00000478938 LTC4SQ16873 150 aa17.41■□□□□ 0.38
SDF4-206ENST00000478938 RTL8BQ17RB0 113 aa17.41■□□□□ 0.38
SDF4-206ENST00000478938 PARM1Q6UWI2 310 aa17.41■□□□□ 0.38
SDF4-206ENST00000478938 DHRS13Q6UX07 377 aa17.41■□□□□ 0.38
SDF4-206ENST00000478938 FER1L6-AS2Q96M78 137 aa17.41■□□□□ 0.38
SDF4-206ENST00000478938 HSPB8Q9UJY1 196 aa17.41■□□□□ 0.38
SDF4-206ENST00000478938 ZNF137PP52743 207 aa17.4■□□□□ 0.38
SDF4-206ENST00000478938 ATP5G2Q06055 141 aa17.4■□□□□ 0.38
SDF4-206ENST00000478938 WFDC2Q14508 124 aa17.4■□□□□ 0.38
SDF4-206ENST00000478938 NRN1LQ496H8 165 aa17.4■□□□□ 0.38
SDF4-206ENST00000478938 FADS6Q8N9I5 356 aa17.4■□□□□ 0.38
SDF4-206ENST00000478938 C18orf15Q96N68 181 aa17.4■□□□□ 0.38
SDF4-206ENST00000478938 OR5AL1P0C617 328 aa17.4■□□□□ 0.38
SDF4-206ENST00000478938 TMPRSS3P57727 454 aa17.4■□□□□ 0.38
SDF4-206ENST00000478938 FOXI2Q6ZQN5 318 aa17.4■□□□□ 0.38
SDF4-206ENST00000478938 TMUB1Q9BVT8 246 aa17.4■□□□□ 0.38
SDF4-206ENST00000478938 A0A1B0GX78 115 aa17.39■□□□□ 0.38
SDF4-206ENST00000478938 GFRA3O60609 400 aa17.39■□□□□ 0.38
SDF4-206ENST00000478938 CSN3P07498 182 aa17.39■□□□□ 0.38
SDF4-206ENST00000478938 GATA3P23771 443 aa17.39■□□□□ 0.38
SDF4-206ENST00000478938 HBBP68871 147 aa17.39■□□□□ 0.38
SDF4-206ENST00000478938 C5orf64Q2M2E5 130 aa17.39■□□□□ 0.38
SDF4-206ENST00000478938 PRDM14Q9GZV8 571 aa17.39■□□□□ 0.38
SDF4-206ENST00000478938 SLC25A10Q9UBX3 287 aaPredicted RBP17.39■□□□□ 0.38
SDF4-206ENST00000478938 A0A0J9YW62 118 aa17.39■□□□□ 0.37
SDF4-206ENST00000478938 A1L4Q6 167 aa17.39■□□□□ 0.37
SDF4-206ENST00000478938 OR2H2O95918 312 aa17.39■□□□□ 0.37
SDF4-206ENST00000478938 VDAC2P45880 294 aaPredicted RBP17.39■□□□□ 0.37
SDF4-206ENST00000478938 VKORC1L1Q8N0U8 176 aa17.39■□□□□ 0.37
SDF4-206ENST00000478938 TAAR6Q96RI8 345 aa17.39■□□□□ 0.37
SDF4-206ENST00000478938 SPAG8Q99932 426 aaPredicted RBP17.39■□□□□ 0.37
SDF4-206ENST00000478938 SDK2Q58EX2 2172 aa17.39■□□□□ 0.37
SDF4-206ENST00000478938 FAM87AP0C7U9 286 aa17.38■□□□□ 0.37
SDF4-206ENST00000478938 LINC00470Q9BZP3 86 aa17.38■□□□□ 0.37
SDF4-206ENST00000478938 TET2Q6N021 2002 aaPredicted RBP17.38■□□□□ 0.37
SDF4-206ENST00000478938 IGHV3-9P01782 118 aa17.38■□□□□ 0.37
SDF4-206ENST00000478938 SH2D6Q7Z4S9 175 aa17.38■□□□□ 0.37
SDF4-206ENST00000478938 ZBTB34Q8NCN2 500 aa17.38■□□□□ 0.37
SDF4-206ENST00000478938 ADTRPQ96IZ2 230 aa17.38■□□□□ 0.37
SDF4-206ENST00000478938 KLF7O75840 302 aaPredicted RBP17.37■□□□□ 0.37
SDF4-206ENST00000478938 CER1O95813 267 aa17.37■□□□□ 0.37
SDF4-206ENST00000478938 PRR20EP86478 221 aa17.37■□□□□ 0.37
SDF4-206ENST00000478938 PRR20CP86479 221 aa17.37■□□□□ 0.37
SDF4-206ENST00000478938 PRR20DP86480 221 aa17.37■□□□□ 0.37
SDF4-206ENST00000478938 PRR20BP86481 221 aa17.37■□□□□ 0.37
SDF4-206ENST00000478938 PRR20AP86496 221 aa17.37■□□□□ 0.37
SDF4-206ENST00000478938 FAM231DQ6ZW35 169 aa17.37■□□□□ 0.37
SDF4-206ENST00000478938 ABHD17AQ96GS6 310 aa17.37■□□□□ 0.37
SDF4-206ENST00000478938 WDR87Q6ZQQ6 2873 aa17.37■□□□□ 0.37
SDF4-206ENST00000478938 HCFC1P51610 2035 aa17.37■□□□□ 0.37
SDF4-206ENST00000478938 IGHV3-7P01780 117 aa17.37■□□□□ 0.37
SDF4-206ENST00000478938 PRAMEF5Q5TYX0 476 aa17.37■□□□□ 0.37
SDF4-206ENST00000478938 PRAMEF6Q5VXH4 476 aa17.37■□□□□ 0.37
SDF4-206ENST00000478938 COLCA1Q6ZS62 124 aa17.37■□□□□ 0.37
SDF4-206ENST00000478938 ATP5L2Q7Z4Y8 100 aa17.37■□□□□ 0.37
SDF4-206ENST00000478938 NABP2Q9BQ15 211 aa17.37■□□□□ 0.37
SDF4-206ENST00000478938 SS18L2Q9UHA2 77 aa17.37■□□□□ 0.37
SDF4-206ENST00000478938 INSIG2Q9Y5U4 225 aa17.37■□□□□ 0.37
SDF4-206ENST00000478938 TNFRSF4P43489 277 aa17.36■□□□□ 0.37
SDF4-206ENST00000478938 TIMM23BQ5SRD1 257 aa17.36■□□□□ 0.37
SDF4-206ENST00000478938 BOD1L2Q8IYS8 172 aa17.36■□□□□ 0.37
SDF4-206ENST00000478938 OR4A16Q8NH70 328 aa17.36■□□□□ 0.37
SDF4-206ENST00000478938 MBNL3Q9NUK0 354 aaKnown RBP17.36■□□□□ 0.37
SDF4-206ENST00000478938 BOKQ9UMX3 212 aaPredicted RBP17.36■□□□□ 0.37
SDF4-206ENST00000478938 F11RQ9Y624 299 aaKnown RBP17.36■□□□□ 0.37
SDF4-206ENST00000478938 SMAD7O15105 426 aaKnown RBP17.36■□□□□ 0.37
SDF4-206ENST00000478938 IGHV4-34P06331 123 aa17.36■□□□□ 0.37
SDF4-206ENST00000478938 PCBD1P61457 104 aa17.36■□□□□ 0.37
SDF4-206ENST00000478938 C9orf135Q5VTT2 229 aa17.36■□□□□ 0.37
SDF4-206ENST00000478938 AAED1Q7RTV5 226 aa17.36■□□□□ 0.37
SDF4-206ENST00000478938 LOXL2Q9Y4K0 774 aa17.36■□□□□ 0.37
SDF4-206ENST00000478938 TRAV3A0A0B4J244 114 aa17.35■□□□□ 0.37
SDF4-206ENST00000478938 J3QR89 54 aa17.35■□□□□ 0.37
SDF4-206ENST00000478938 FKBP2P26885 142 aaKnown RBP17.35■□□□□ 0.37
SDF4-206ENST00000478938 VGLL1Q99990 258 aa17.35■□□□□ 0.37
SDF4-206ENST00000478938 K7ERJ3 54 aa17.35■□□□□ 0.37
SDF4-206ENST00000478938 NGFP01138 241 aa17.35■□□□□ 0.37
SDF4-206ENST00000478938 SPACA9Q96E40 222 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms