RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 NMES1Q9C002 83 aa10.5□□□□□ -0.73
NUDCD3-207ENST00000478769 ZFP57Q9NU63 452 aa10.5□□□□□ -0.73
NUDCD3-207ENST00000478769 LSM5Q9Y4Y9 91 aaKnown RBP10.5□□□□□ -0.73
NUDCD3-207ENST00000478769 IGHV3-21A0A0B4J1V1 117 aa10.49□□□□□ -0.73
NUDCD3-207ENST00000478769 C15orf62A8K5M9 175 aa10.49□□□□□ -0.73
NUDCD3-207ENST00000478769 NUDT19A8MXV4 375 aa10.49□□□□□ -0.73
NUDCD3-207ENST00000478769 H3BP45 60 aa10.49□□□□□ -0.73
NUDCD3-207ENST00000478769 K7EIM0 57 aa10.49□□□□□ -0.73
NUDCD3-207ENST00000478769 IFNA10P01566 189 aa10.49□□□□□ -0.73
NUDCD3-207ENST00000478769 LGALS1P09382 135 aaKnown RBP10.49□□□□□ -0.73
NUDCD3-207ENST00000478769 PAX9P55771 341 aa10.49□□□□□ -0.73
NUDCD3-207ENST00000478769 EXOSC2Q13868 293 aaKnown RBP10.49□□□□□ -0.73
NUDCD3-207ENST00000478769 DEFB136Q30KP8 78 aa10.49□□□□□ -0.73
NUDCD3-207ENST00000478769 C2orf83Q53S99 150 aa10.49□□□□□ -0.73
NUDCD3-207ENST00000478769 C8orf86Q6ZUL3 223 aa10.49□□□□□ -0.73
NUDCD3-207ENST00000478769 OR1L6Q8NGR2 347 aa10.49□□□□□ -0.73
NUDCD3-207ENST00000478769 C4orf3Q8WVX3 66 aa10.49□□□□□ -0.73
NUDCD3-207ENST00000478769 MISP3Q96FF7 219 aa10.49□□□□□ -0.73
NUDCD3-207ENST00000478769 USMG5Q96IX5 58 aa10.49□□□□□ -0.73
NUDCD3-207ENST00000478769 CIB3Q96Q77 187 aaPredicted RBP10.49□□□□□ -0.73
NUDCD3-207ENST00000478769 C11orf1Q9H5F2 150 aa10.49□□□□□ -0.73
NUDCD3-207ENST00000478769 S4R3C0 116 aa10.49□□□□□ -0.73
NUDCD3-207ENST00000478769 WNK1Q9H4A3 2382 aa10.48□□□□□ -0.73
NUDCD3-207ENST00000478769 A0A0G2JLM5 398 aa10.48□□□□□ -0.73
NUDCD3-207ENST00000478769 I3L2K1 104 aa10.48□□□□□ -0.73
NUDCD3-207ENST00000478769 I3L521 148 aa10.48□□□□□ -0.73
NUDCD3-207ENST00000478769 CYB5BO43169 146 aa10.48□□□□□ -0.73
NUDCD3-207ENST00000478769 IGHV3-23P01764 117 aa10.48□□□□□ -0.73
NUDCD3-207ENST00000478769 SUB1P53999 127 aaKnown RBP eCLIP10.48□□□□□ -0.73
NUDCD3-207ENST00000478769 ATP5G2Q06055 141 aa10.48□□□□□ -0.73
NUDCD3-207ENST00000478769 LRRC37A5PQ49AS3 106 aa10.48□□□□□ -0.73
NUDCD3-207ENST00000478769 SPATA3Q8NHX4 192 aa10.48□□□□□ -0.73
NUDCD3-207ENST00000478769 CCDC140Q96MF4 163 aa10.48□□□□□ -0.73
NUDCD3-207ENST00000478769 U3KQ87 197 aa10.48□□□□□ -0.73
NUDCD3-207ENST00000478769 PKD1L1Q8TDX9 2849 aa10.48□□□□□ -0.73
NUDCD3-207ENST00000478769 MT-CO2P00403 227 aa10.47□□□□□ -0.73
NUDCD3-207ENST00000478769 TRBV12-3P01733 135 aa10.47□□□□□ -0.73
NUDCD3-207ENST00000478769 CYCSP99999 105 aaKnown RBP10.47□□□□□ -0.73
NUDCD3-207ENST00000478769 RUNX1Q01196 453 aa10.47□□□□□ -0.73
NUDCD3-207ENST00000478769 ZNF343Q6P1L6 599 aa10.47□□□□□ -0.73
NUDCD3-207ENST00000478769 ETV3LQ6ZN32 361 aa10.47□□□□□ -0.73
NUDCD3-207ENST00000478769 ZNF502Q8TBZ5 544 aa10.47□□□□□ -0.73
NUDCD3-207ENST00000478769 PPP1R1CQ8WVI7 109 aa10.47□□□□□ -0.73
NUDCD3-207ENST00000478769 PINX1Q96BK5 328 aaKnown RBP10.47□□□□□ -0.73
NUDCD3-207ENST00000478769 SMIM8Q96KF7 97 aa10.47□□□□□ -0.73
NUDCD3-207ENST00000478769 DUX3Q96PT4 197 aa10.47□□□□□ -0.73
NUDCD3-207ENST00000478769 RAB40CQ96S21 281 aa10.47□□□□□ -0.73
NUDCD3-207ENST00000478769 ZNF436Q9C0F3 470 aaPredicted RBP10.47□□□□□ -0.73
NUDCD3-207ENST00000478769 FNDC4Q9H6D8 234 aaPredicted RBP10.47□□□□□ -0.73
NUDCD3-207ENST00000478769 PSENENQ9NZ42 101 aa10.47□□□□□ -0.73
NUDCD3-207ENST00000478769 THYN1Q9P016 225 aa10.47□□□□□ -0.73
NUDCD3-207ENST00000478769 F8W735 103 aaPredicted RBP10.46□□□□□ -0.73
NUDCD3-207ENST00000478769 H0YIZ8 118 aa10.46□□□□□ -0.73
NUDCD3-207ENST00000478769 DEDDO75618 318 aa10.46□□□□□ -0.73
NUDCD3-207ENST00000478769 LY86O95711 162 aa10.46□□□□□ -0.73
NUDCD3-207ENST00000478769 TSPAN15O95858 294 aa10.46□□□□□ -0.73
NUDCD3-207ENST00000478769 IGHV3-48P01763 117 aa10.46□□□□□ -0.73
NUDCD3-207ENST00000478769 GIPP09681 153 aaPredicted RBP10.46□□□□□ -0.73
NUDCD3-207ENST00000478769 TAS2R30P59541 319 aa10.46□□□□□ -0.73
NUDCD3-207ENST00000478769 SPANXN5Q5MJ07 72 aa10.46□□□□□ -0.73
NUDCD3-207ENST00000478769 RNASEH2CQ8TDP1 164 aaKnown RBP10.46□□□□□ -0.73
NUDCD3-207ENST00000478769 VN1R17PQ8TDU5 208 aa10.46□□□□□ -0.73
NUDCD3-207ENST00000478769 SCARB1Q8WTV0 552 aa10.46□□□□□ -0.73
NUDCD3-207ENST00000478769 EEF1AKMT3Q96AZ1 226 aa10.46□□□□□ -0.73
NUDCD3-207ENST00000478769 RAX2Q96IS3 184 aa10.46□□□□□ -0.73
NUDCD3-207ENST00000478769 CXorf58Q96LI9 332 aa10.46□□□□□ -0.73
NUDCD3-207ENST00000478769 OR5AC2Q9NZP5 309 aa10.46□□□□□ -0.73
NUDCD3-207ENST00000478769 PAIP2BQ9ULR5 123 aaKnown RBP10.46□□□□□ -0.73
NUDCD3-207ENST00000478769 STRAPQ9Y3F4 350 aaKnown RBP10.46□□□□□ -0.73
NUDCD3-207ENST00000478769 IGHV4OR15-8A0A075B7B6 117 aa10.45□□□□□ -0.74
NUDCD3-207ENST00000478769 A0A087WW49 117 aa10.45□□□□□ -0.74
NUDCD3-207ENST00000478769 ANKRD34BA5PLL1 514 aa10.45□□□□□ -0.74
NUDCD3-207ENST00000478769 PRSS46E5RG02 174 aa10.45□□□□□ -0.74
NUDCD3-207ENST00000478769 L7N2F9 121 aa10.45□□□□□ -0.74
NUDCD3-207ENST00000478769 CORTO00230 105 aa10.45□□□□□ -0.74
NUDCD3-207ENST00000478769 TSC22D2O75157 780 aa10.45□□□□□ -0.74
NUDCD3-207ENST00000478769 CCNKO75909 580 aa10.45□□□□□ -0.74
NUDCD3-207ENST00000478769 OR8U8P0C7N1 319 aa10.45□□□□□ -0.74
NUDCD3-207ENST00000478769 OPRK1P41145 380 aa10.45□□□□□ -0.74
NUDCD3-207ENST00000478769 ATP5IP56385 69 aaPredicted RBP10.45□□□□□ -0.74
NUDCD3-207ENST00000478769 VAMP2P63027 116 aa10.45□□□□□ -0.74
NUDCD3-207ENST00000478769 NOXA1Q86UR1 476 aa10.45□□□□□ -0.74
NUDCD3-207ENST00000478769 CHAC2Q8WUX2 184 aa10.45□□□□□ -0.74
NUDCD3-207ENST00000478769 C21orf62Q9NYP8 219 aa10.45□□□□□ -0.74
NUDCD3-207ENST00000478769 MRPL36Q9P0J6 103 aaKnown RBP10.45□□□□□ -0.74
NUDCD3-207ENST00000478769 hCG_2014768A0A024R1R8 64 aa10.44□□□□□ -0.74
NUDCD3-207ENST00000478769 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.44□□□□□ -0.74
NUDCD3-207ENST00000478769 TRAV14DV4A0A0A6YYC5 116 aa10.44□□□□□ -0.74
NUDCD3-207ENST00000478769 TRBV7-1A0A0A6YYK4 115 aa10.44□□□□□ -0.74
NUDCD3-207ENST00000478769 A0A1B0GVG6 124 aa10.44□□□□□ -0.74
NUDCD3-207ENST00000478769 PPP5D1E7EU14 171 aa10.44□□□□□ -0.74
NUDCD3-207ENST00000478769 M0QZ24 198 aa10.44□□□□□ -0.74
NUDCD3-207ENST00000478769 BMPR1BO00238 502 aa10.44□□□□□ -0.74
NUDCD3-207ENST00000478769 MPC2O95563 127 aa10.44□□□□□ -0.74
NUDCD3-207ENST00000478769 IFNA4P05014 189 aa10.44□□□□□ -0.74
NUDCD3-207ENST00000478769 GPR183P32249 361 aa10.44□□□□□ -0.74
NUDCD3-207ENST00000478769 RPP30P78346 268 aaKnown RBP10.44□□□□□ -0.74
NUDCD3-207ENST00000478769 FHL3Q13643 280 aa10.44□□□□□ -0.74
NUDCD3-207ENST00000478769 MLANAQ16655 118 aa10.44□□□□□ -0.74
NUDCD3-207ENST00000478769 TMEM14EPQ6UXP3 125 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms