RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 PMS2P11Q13670 270 aa10.73□□□□□ -0.69
SMARCE1-209ENST00000478349 CCDC71LQ8N9Z2 235 aa10.73□□□□□ -0.69
SMARCE1-209ENST00000478349 DUSP18Q8NEJ0 188 aa10.73□□□□□ -0.69
SMARCE1-209ENST00000478349 PINX1Q96BK5 328 aaKnown RBP10.73□□□□□ -0.69
SMARCE1-209ENST00000478349 RNF183Q96D59 192 aa10.73□□□□□ -0.69
SMARCE1-209ENST00000478349 FUNDC2Q9BWH2 189 aa10.73□□□□□ -0.69
SMARCE1-209ENST00000478349 NXF2Q9GZY0 626 aaKnown RBP10.73□□□□□ -0.69
SMARCE1-209ENST00000478349 ENY2Q9NPA8 101 aa10.73□□□□□ -0.69
SMARCE1-209ENST00000478349 IGHV3OR16-8A0A075B7F1 116 aa10.72□□□□□ -0.69
SMARCE1-209ENST00000478349 F8W735 103 aaPredicted RBP10.72□□□□□ -0.69
SMARCE1-209ENST00000478349 I3L2K1 104 aa10.72□□□□□ -0.69
SMARCE1-209ENST00000478349 CHEK1O14757 476 aa10.72□□□□□ -0.69
SMARCE1-209ENST00000478349 ZNF207O43670 478 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-209ENST00000478349 VBP1P61758 197 aa10.72□□□□□ -0.69
SMARCE1-209ENST00000478349 NCS1P62166 190 aa10.72□□□□□ -0.69
SMARCE1-209ENST00000478349 RNASE11Q8TAA1 199 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-209ENST00000478349 ZFAND1Q8TCF1 268 aa10.72□□□□□ -0.69
SMARCE1-209ENST00000478349 GATAD1Q8WUU5 269 aa10.72□□□□□ -0.69
SMARCE1-209ENST00000478349 NARS2Q96I59 477 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-209ENST00000478349 MAP6D1Q9H9H5 199 aa10.72□□□□□ -0.69
SMARCE1-209ENST00000478349 RYR2Q92736 4967 aa10.72□□□□□ -0.69
SMARCE1-209ENST00000478349 MPTX1A8MV57 137 aa10.71□□□□□ -0.69
SMARCE1-209ENST00000478349 IFNA17P01571 189 aa10.71□□□□□ -0.69
SMARCE1-209ENST00000478349 RPL35AP18077 110 aaKnown RBP10.71□□□□□ -0.69
SMARCE1-209ENST00000478349 ELK1P19419 428 aa10.71□□□□□ -0.69
SMARCE1-209ENST00000478349 HOXA1P49639 335 aaPredicted RBP10.71□□□□□ -0.69
SMARCE1-209ENST00000478349 PIGPP57054 158 aa10.71□□□□□ -0.69
SMARCE1-209ENST00000478349 TRIM16LQ309B1 348 aa10.71□□□□□ -0.69
SMARCE1-209ENST00000478349 LINC00476Q8WZB0 136 aa10.71□□□□□ -0.69
SMARCE1-209ENST00000478349 RRNAD1Q96FB5 475 aaKnown RBP10.71□□□□□ -0.69
SMARCE1-209ENST00000478349 RNF2Q99496 336 aa10.71□□□□□ -0.69
SMARCE1-209ENST00000478349 COPZ2Q9P299 210 aa10.71□□□□□ -0.69
SMARCE1-209ENST00000478349 DBX1A6NMT0 343 aa10.7□□□□□ -0.7
SMARCE1-209ENST00000478349 INS-IGF2F8WCM5 200 aa10.7□□□□□ -0.7
SMARCE1-209ENST00000478349 M0QYG6 137 aa10.7□□□□□ -0.7
SMARCE1-209ENST00000478349 DNASE2O00115 360 aaPredicted RBP10.7□□□□□ -0.7
SMARCE1-209ENST00000478349 HPGDSO60760 199 aa10.7□□□□□ -0.7
SMARCE1-209ENST00000478349 DFFBO76075 338 aa10.7□□□□□ -0.7
SMARCE1-209ENST00000478349 CEMP1Q6PRD7 247 aaPredicted RBP10.7□□□□□ -0.7
SMARCE1-209ENST00000478349 ZNF600Q6ZNG1 722 aa10.7□□□□□ -0.7
SMARCE1-209ENST00000478349 MFFQ9GZY8 342 aa10.7□□□□□ -0.7
SMARCE1-209ENST00000478349 CSTL1Q9H114 145 aa10.7□□□□□ -0.7
SMARCE1-209ENST00000478349 TRAV2A0A0B4J234 112 aa10.69□□□□□ -0.7
SMARCE1-209ENST00000478349 C3orf85A0A1B0GTC6 90 aa10.69□□□□□ -0.7
SMARCE1-209ENST00000478349 A0A1W2PS18 150 aa10.69□□□□□ -0.7
SMARCE1-209ENST00000478349 ST8SIA3O43173 380 aa10.69□□□□□ -0.7
SMARCE1-209ENST00000478349 LY6G6CO95867 125 aa10.69□□□□□ -0.7
SMARCE1-209ENST00000478349 IGKV1-39P01597 117 aa10.69□□□□□ -0.7
SMARCE1-209ENST00000478349 IGKV1D-39P04432 117 aa10.69□□□□□ -0.7
SMARCE1-209ENST00000478349 ZNF182P17025 639 aaPredicted RBP10.69□□□□□ -0.7
SMARCE1-209ENST00000478349 TFPI2P48307 235 aa10.69□□□□□ -0.7
SMARCE1-209ENST00000478349 TAS2R19P59542 299 aa10.69□□□□□ -0.7
SMARCE1-209ENST00000478349 MRPS10P82664 201 aaKnown RBP10.69□□□□□ -0.7
SMARCE1-209ENST00000478349 CACFD1Q9UGQ2 172 aa10.69□□□□□ -0.7
SMARCE1-209ENST00000478349 CSMD3Q7Z407 3707 aa10.68□□□□□ -0.7
SMARCE1-209ENST00000478349 RPS10-NUDT3A0A1W2PQS6 291 aa10.68□□□□□ -0.7
SMARCE1-209ENST00000478349 CD3DP04234 171 aa10.68□□□□□ -0.7
SMARCE1-209ENST00000478349 EIF2B2P49770 351 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-209ENST00000478349 PPP5CP53041 499 aa10.68□□□□□ -0.7
SMARCE1-209ENST00000478349 RPL11P62913 178 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-209ENST00000478349 SSBP1Q04837 148 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-209ENST00000478349 TCF24Q7RTU0 167 aa10.68□□□□□ -0.7
SMARCE1-209ENST00000478349 APRG1Q8IVJ8 170 aa10.68□□□□□ -0.7
SMARCE1-209ENST00000478349 FAM219AQ8IW50 185 aa10.68□□□□□ -0.7
SMARCE1-209ENST00000478349 EXTL2Q9UBQ6 330 aa10.68□□□□□ -0.7
SMARCE1-209ENST00000478349 MTFP1Q9UDX5 166 aa10.68□□□□□ -0.7
SMARCE1-209ENST00000478349 C14orf166Q9Y224 244 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-209ENST00000478349 IGKV3-7A0A075B6H7 116 aa10.67□□□□□ -0.7
SMARCE1-209ENST00000478349 IGHV3-49A0A0A0MS15 119 aa10.67□□□□□ -0.7
SMARCE1-209ENST00000478349 LCE2BO14633 110 aa10.67□□□□□ -0.7
SMARCE1-209ENST00000478349 GABARAPO95166 117 aa10.67□□□□□ -0.7
SMARCE1-209ENST00000478349 NPPCP23582 126 aa10.67□□□□□ -0.7
SMARCE1-209ENST00000478349 OPRK1P41145 380 aa10.67□□□□□ -0.7
SMARCE1-209ENST00000478349 MEF2DQ14814 521 aa10.67□□□□□ -0.7
SMARCE1-209ENST00000478349 SCGB2B2Q4G0G5 96 aa10.67□□□□□ -0.7
SMARCE1-209ENST00000478349 TMEM41BQ5BJD5 291 aa10.67□□□□□ -0.7
SMARCE1-209ENST00000478349 RNASE12Q5GAN4 147 aaKnown RBP10.67□□□□□ -0.7
SMARCE1-209ENST00000478349 TOMM20LQ6UXN7 152 aa10.67□□□□□ -0.7
SMARCE1-209ENST00000478349 LHFPL1Q86WI0 220 aa10.67□□□□□ -0.7
SMARCE1-209ENST00000478349 TERB2Q8NHR7 220 aa10.67□□□□□ -0.7
SMARCE1-209ENST00000478349 GRAMD2BQ96HH9 432 aa10.67□□□□□ -0.7
SMARCE1-209ENST00000478349 METTL26Q96S19 204 aa10.67□□□□□ -0.7
SMARCE1-209ENST00000478349 TP53RKQ96S44 253 aa10.67□□□□□ -0.7
SMARCE1-209ENST00000478349 RARRES2Q99969 163 aa10.67□□□□□ -0.7
SMARCE1-209ENST00000478349 KLK11Q9UBX7 282 aa10.67□□□□□ -0.7
SMARCE1-209ENST00000478349 PUS1Q9Y606 427 aaKnown RBP eCLIP10.67□□□□□ -0.7
SMARCE1-209ENST00000478349 TRAV30A0A087WSZ9 112 aa10.66□□□□□ -0.7
SMARCE1-209ENST00000478349 RAB3DO95716 219 aa10.66□□□□□ -0.7
SMARCE1-209ENST00000478349 IGKV1-5P01602 117 aa10.66□□□□□ -0.7
SMARCE1-209ENST00000478349 PI3P19957 117 aa10.66□□□□□ -0.7
SMARCE1-209ENST00000478349 SURF2Q15527 256 aaPredicted RBP10.66□□□□□ -0.7
SMARCE1-209ENST00000478349 SPINK9Q5DT21 86 aa10.66□□□□□ -0.7
SMARCE1-209ENST00000478349 GBGT1Q8N5D6 347 aa10.66□□□□□ -0.7
SMARCE1-209ENST00000478349 TMEM229BQ8NBD8 167 aa10.66□□□□□ -0.7
SMARCE1-209ENST00000478349 OR52I2Q8NH67 350 aa10.66□□□□□ -0.7
SMARCE1-209ENST00000478349 C11orf68Q9H3H3 251 aaKnown RBP10.66□□□□□ -0.7
SMARCE1-209ENST00000478349 VSIRQ9H7M9 311 aa10.66□□□□□ -0.7
SMARCE1-209ENST00000478349 RABL2AQ9UBK7 228 aaPredicted RBP10.66□□□□□ -0.7
SMARCE1-209ENST00000478349 RABL2BQ9UNT1 228 aa10.66□□□□□ -0.7
SMARCE1-209ENST00000478349 STARD9Q9P2P6 4700 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms