RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 CX3CL1P78423 397 aa14.73□□□□□ -0.05
CCM2-209ENST00000477605 ERHP84090 104 aaKnown RBP14.73□□□□□ -0.05
CCM2-209ENST00000477605 MRPL52Q86TS9 123 aaKnown RBP14.73□□□□□ -0.05
CCM2-209ENST00000477605 SLC25A33Q9BSK2 321 aa14.73□□□□□ -0.05
CCM2-209ENST00000477605 NDUFA4L2Q9NRX3 87 aa14.73□□□□□ -0.05
CCM2-209ENST00000477605 RAXQ9Y2V3 346 aa14.73□□□□□ -0.05
CCM2-209ENST00000477605 POLR3KQ9Y2Y1 108 aaPredicted RBP14.73□□□□□ -0.05
CCM2-209ENST00000477605 CRYABP02511 175 aaKnown RBP14.72□□□□□ -0.05
CCM2-209ENST00000477605 TNFRSF1AP19438 455 aa14.72□□□□□ -0.05
CCM2-209ENST00000477605 USF2Q15853 346 aaPredicted RBP14.72□□□□□ -0.05
CCM2-209ENST00000477605 KRTCAP3Q53RY4 240 aa14.72□□□□□ -0.05
CCM2-209ENST00000477605 TMEM177Q53S58 311 aa14.72□□□□□ -0.05
CCM2-209ENST00000477605 FAM71F2Q6NXP2 309 aa14.72□□□□□ -0.05
CCM2-209ENST00000477605 ZNF714Q96N38 554 aa14.72□□□□□ -0.05
CCM2-209ENST00000477605 A0A1W2PN81 502 aa14.72□□□□□ -0.05
CCM2-209ENST00000477605 OR7C2O60412 319 aa14.72□□□□□ -0.05
CCM2-209ENST00000477605 PPOXP50336 477 aa14.72□□□□□ -0.05
CCM2-209ENST00000477605 OR5AN1Q8NGI8 311 aa14.72□□□□□ -0.05
CCM2-209ENST00000477605 COMMD5Q9GZQ3 224 aa14.72□□□□□ -0.05
CCM2-209ENST00000477605 A0A1B0GUS0 222 aa14.71□□□□□ -0.05
CCM2-209ENST00000477605 GRIFINA4D1Z8 144 aa14.71□□□□□ -0.05
CCM2-209ENST00000477605 SNURFLB1AK76 121 aa14.71□□□□□ -0.05
CCM2-209ENST00000477605 NDUFB7P17568 137 aa14.71□□□□□ -0.05
CCM2-209ENST00000477605 IER3P46695 156 aa14.71□□□□□ -0.05
CCM2-209ENST00000477605 VSTM2AQ8TAG5 236 aa14.71□□□□□ -0.05
CCM2-209ENST00000477605 WFIKKN1Q96NZ8 548 aa14.71□□□□□ -0.05
CCM2-209ENST00000477605 DSPP15924 2871 aaKnown RBP14.7□□□□□ -0.06
CCM2-209ENST00000477605 USF1P22415 310 aaPredicted RBP14.7□□□□□ -0.06
CCM2-209ENST00000477605 BAGE3Q86Y29 109 aa14.7□□□□□ -0.06
CCM2-209ENST00000477605 BAGE2Q86Y30 109 aa14.7□□□□□ -0.06
CCM2-209ENST00000477605 OR8I2Q8N0Y5 310 aa14.7□□□□□ -0.06
CCM2-209ENST00000477605 C8orf31Q8N9H6 132 aa14.7□□□□□ -0.06
CCM2-209ENST00000477605 TET2Q6N021 2002 aaPredicted RBP14.7□□□□□ -0.06
CCM2-209ENST00000477605 ZNF705FA8MVS1 300 aaPredicted RBP14.7□□□□□ -0.06
CCM2-209ENST00000477605 GGTLC3B5MD39 225 aa14.7□□□□□ -0.06
CCM2-209ENST00000477605 SERF1AO75920 110 aa14.7□□□□□ -0.06
CCM2-209ENST00000477605 SNRPCP09234 159 aaKnown RBP14.7□□□□□ -0.06
CCM2-209ENST00000477605 ZNF705DP0CH99 300 aaPredicted RBP14.7□□□□□ -0.06
CCM2-209ENST00000477605 ZNF705BP0CI00 300 aaPredicted RBP14.7□□□□□ -0.06
CCM2-209ENST00000477605 LINC00310P59036 64 aa14.7□□□□□ -0.06
CCM2-209ENST00000477605 RPL8P62917 257 aaKnown RBP14.7□□□□□ -0.06
CCM2-209ENST00000477605 OR5I1Q13606 314 aa14.7□□□□□ -0.06
CCM2-209ENST00000477605 OR10J3Q5JRS4 329 aa14.7□□□□□ -0.06
CCM2-209ENST00000477605 TEX43Q6ZNM6 134 aa14.7□□□□□ -0.06
CCM2-209ENST00000477605 OR5AU1Q8NGC0 362 aa14.7□□□□□ -0.06
CCM2-209ENST00000477605 TMEM167AQ8TBQ9 72 aa14.7□□□□□ -0.06
CCM2-209ENST00000477605 TBX15Q96SF7 602 aa14.7□□□□□ -0.06
CCM2-209ENST00000477605 DNAJC4Q9NNZ3 241 aa14.7□□□□□ -0.06
CCM2-209ENST00000477605 PSMB11A5LHX3 300 aa14.69□□□□□ -0.06
CCM2-209ENST00000477605 H0YJW9 148 aa14.69□□□□□ -0.06
CCM2-209ENST00000477605 M0R143 59 aa14.69□□□□□ -0.06
CCM2-209ENST00000477605 RNF224P0DH78 156 aa14.69□□□□□ -0.06
CCM2-209ENST00000477605 SUMO1P63165 101 aaKnown RBP14.69□□□□□ -0.06
CCM2-209ENST00000477605 TMEM108Q6UXF1 575 aa14.69□□□□□ -0.06
CCM2-209ENST00000477605 Q6ZWC4 215 aa14.69□□□□□ -0.06
CCM2-209ENST00000477605 MOB3BQ86TA1 216 aa14.69□□□□□ -0.06
CCM2-209ENST00000477605 OR9G1Q8NH87 305 aa14.69□□□□□ -0.06
CCM2-209ENST00000477605 IGF2BP2-AS1Q96M15 143 aa14.69□□□□□ -0.06
CCM2-209ENST00000477605 HARBI1Q96MB7 349 aa14.69□□□□□ -0.06
CCM2-209ENST00000477605 C20orf144Q9BQM9 153 aa14.69□□□□□ -0.06
CCM2-209ENST00000477605 SUB1P53999 127 aaKnown RBP eCLIP14.69□□□□□ -0.06
CCM2-209ENST00000477605 RPRMLQ8N4K4 120 aa14.69□□□□□ -0.06
CCM2-209ENST00000477605 OR1L4Q8NGR5 311 aa14.69□□□□□ -0.06
CCM2-209ENST00000477605 FAM57AQ8TBR7 257 aa14.69□□□□□ -0.06
CCM2-209ENST00000477605 FLYWCH2Q96CP2 140 aaKnown RBP14.69□□□□□ -0.06
CCM2-209ENST00000477605 MRPL20Q9BYC9 149 aaKnown RBP14.69□□□□□ -0.06
CCM2-209ENST00000477605 CHD6Q8TD26 2715 aa14.68□□□□□ -0.06
CCM2-209ENST00000477605 SMIM27A0A1W2PRY6 76 aa14.68□□□□□ -0.06
CCM2-209ENST00000477605 IGLV2-8P01709 118 aa14.68□□□□□ -0.06
CCM2-209ENST00000477605 NUTF2P61970 127 aaKnown RBP14.68□□□□□ -0.06
CCM2-209ENST00000477605 PDPNQ86YL7 162 aa14.68□□□□□ -0.06
CCM2-209ENST00000477605 LINC00311Q8N616 119 aa14.68□□□□□ -0.06
CCM2-209ENST00000477605 ST6GALNAC3Q8NDV1 305 aa14.68□□□□□ -0.06
CCM2-209ENST00000477605 ZNF596Q8TC21 504 aa14.68□□□□□ -0.06
CCM2-209ENST00000477605 FAM167A-AS1Q96KT0 104 aa14.68□□□□□ -0.06
CCM2-209ENST00000477605 CDC42EP3Q9UKI2 254 aa14.68□□□□□ -0.06
CCM2-209ENST00000477605 M0QZK8 103 aa14.67□□□□□ -0.06
CCM2-209ENST00000477605 HLA-DQA1P01909 254 aa14.67□□□□□ -0.06
CCM2-209ENST00000477605 BRS3P32247 399 aa14.67□□□□□ -0.06
CCM2-209ENST00000477605 FAM27E3Q08E93 113 aa14.67□□□□□ -0.06
CCM2-209ENST00000477605 RASL11AQ6T310 242 aa14.67□□□□□ -0.06
CCM2-209ENST00000477605 TMEM136Q6ZRR5 245 aa14.67□□□□□ -0.06
CCM2-209ENST00000477605 SSX8Q7RTT4 187 aa14.67□□□□□ -0.06
CCM2-209ENST00000477605 DOLPP1Q86YN1 238 aa14.67□□□□□ -0.06
CCM2-209ENST00000477605 OR4C13Q8NGP0 309 aa14.67□□□□□ -0.06
CCM2-209ENST00000477605 TMEM186Q96B77 213 aa14.67□□□□□ -0.06
CCM2-209ENST00000477605 AMY1AP04745 511 aa14.67□□□□□ -0.06
CCM2-209ENST00000477605 GATA2P23769 480 aaPredicted RBP14.67□□□□□ -0.06
CCM2-209ENST00000477605 IBA57Q5T440 356 aaKnown RBP14.67□□□□□ -0.06
CCM2-209ENST00000477605 TPTE2P1Q5T6R2 138 aa14.67□□□□□ -0.06
CCM2-209ENST00000477605 HSPB9Q9BQS6 159 aa14.67□□□□□ -0.06
CCM2-209ENST00000477605 NAT8BQ9UHF3 227 aa14.67□□□□□ -0.06
CCM2-209ENST00000477605 C17orf100A8MU93 164 aa14.66□□□□□ -0.06
CCM2-209ENST00000477605 FAM231DQ6ZW35 169 aa14.66□□□□□ -0.06
CCM2-209ENST00000477605 OR10W1Q8NGF6 305 aa14.66□□□□□ -0.06
CCM2-209ENST00000477605 RND1Q92730 232 aa14.66□□□□□ -0.06
CCM2-209ENST00000477605 SLC25A2Q9BXI2 301 aa14.66□□□□□ -0.06
CCM2-209ENST00000477605 SAMD10Q9BYL1 202 aa14.66□□□□□ -0.06
CCM2-209ENST00000477605 INTS1Q8N201 2190 aaKnown RBP14.66□□□□□ -0.06
CCM2-209ENST00000477605 ZFYVE26Q68DK2 2539 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms