RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 CASQ2O14958 399 aaPredicted RBP11.79□□□□□ -0.52
APOBEC3F-203ENST00000476513 ATP6V1G2O95670 118 aa11.79□□□□□ -0.52
APOBEC3F-203ENST00000476513 IFNA21P01568 189 aa11.79□□□□□ -0.52
APOBEC3F-203ENST00000476513 IFNA17P01571 189 aa11.79□□□□□ -0.52
APOBEC3F-203ENST00000476513 UBE2DNLQ8IWF7 75 aa11.79□□□□□ -0.52
APOBEC3F-203ENST00000476513 TMEM56Q96MV1 263 aa11.79□□□□□ -0.52
APOBEC3F-203ENST00000476513 TPRKBQ9Y3C4 175 aa11.79□□□□□ -0.52
APOBEC3F-203ENST00000476513 DBX1A6NMT0 343 aa11.78□□□□□ -0.52
APOBEC3F-203ENST00000476513 K7EQG2 157 aa11.78□□□□□ -0.52
APOBEC3F-203ENST00000476513 RGS10O43665 173 aa11.78□□□□□ -0.52
APOBEC3F-203ENST00000476513 GNG7O60262 68 aa11.78□□□□□ -0.52
APOBEC3F-203ENST00000476513 SNAPC5O75971 98 aa11.78□□□□□ -0.52
APOBEC3F-203ENST00000476513 MT-CO2P00403 227 aa11.78□□□□□ -0.52
APOBEC3F-203ENST00000476513 NPY1RP25929 384 aa11.78□□□□□ -0.52
APOBEC3F-203ENST00000476513 RCN1Q15293 331 aa11.78□□□□□ -0.52
APOBEC3F-203ENST00000476513 OGFRL1Q5TC84 451 aaPredicted RBP11.78□□□□□ -0.52
APOBEC3F-203ENST00000476513 C1orf134Q5TEV5 83 aa11.78□□□□□ -0.52
APOBEC3F-203ENST00000476513 C16orf90A8MZG2 172 aa11.77□□□□□ -0.53
APOBEC3F-203ENST00000476513 SCGNO76038 276 aa11.77□□□□□ -0.53
APOBEC3F-203ENST00000476513 KRASP01116 189 aa11.77□□□□□ -0.53
APOBEC3F-203ENST00000476513 ZNF688P0C7X2 276 aa11.77□□□□□ -0.53
APOBEC3F-203ENST00000476513 G6PCP35575 357 aa11.77□□□□□ -0.53
APOBEC3F-203ENST00000476513 ACTL10Q5JWF8 245 aa11.77□□□□□ -0.53
APOBEC3F-203ENST00000476513 TMEM17Q86X19 198 aa11.77□□□□□ -0.53
APOBEC3F-203ENST00000476513 HOGA1Q86XE5 327 aa11.77□□□□□ -0.53
APOBEC3F-203ENST00000476513 CADM3Q8N126 398 aa11.77□□□□□ -0.53
APOBEC3F-203ENST00000476513 STXBP6Q8NFX7 210 aa11.77□□□□□ -0.53
APOBEC3F-203ENST00000476513 GRAMD2BQ96HH9 432 aa11.77□□□□□ -0.53
APOBEC3F-203ENST00000476513 ZFAND3Q9H8U3 227 aa11.77□□□□□ -0.53
APOBEC3F-203ENST00000476513 PRNDQ9UKY0 176 aa11.77□□□□□ -0.53
APOBEC3F-203ENST00000476513 PUS1Q9Y606 427 aaKnown RBP eCLIP11.77□□□□□ -0.53
APOBEC3F-203ENST00000476513 LRP1BQ9NZR2 4599 aa11.77□□□□□ -0.53
APOBEC3F-203ENST00000476513 F2RP25116 425 aa11.76□□□□□ -0.53
APOBEC3F-203ENST00000476513 GNRHRP30968 328 aa11.76□□□□□ -0.53
APOBEC3F-203ENST00000476513 LPAR6P43657 344 aa11.76□□□□□ -0.53
APOBEC3F-203ENST00000476513 FCAMRQ8WWV6 532 aa11.76□□□□□ -0.53
APOBEC3F-203ENST00000476513 TMEM231Q9H6L2 316 aa11.76□□□□□ -0.53
APOBEC3F-203ENST00000476513 RLN1P04808 185 aa11.75□□□□□ -0.53
APOBEC3F-203ENST00000476513 FCER2P06734 321 aa11.75□□□□□ -0.53
APOBEC3F-203ENST00000476513 C22orf42Q6IC83 251 aa11.75□□□□□ -0.53
APOBEC3F-203ENST00000476513 PINX1Q96BK5 328 aaKnown RBP11.75□□□□□ -0.53
APOBEC3F-203ENST00000476513 FKBP11Q9NYL4 201 aa11.75□□□□□ -0.53
APOBEC3F-203ENST00000476513 A0A1B0GU03 582 aa11.74□□□□□ -0.53
APOBEC3F-203ENST00000476513 TRDV1A0A1B0GX56 115 aa11.74□□□□□ -0.53
APOBEC3F-203ENST00000476513 NOTOA8MTQ0 251 aa11.74□□□□□ -0.53
APOBEC3F-203ENST00000476513 PGLYRP1O75594 196 aaPredicted RBP11.74□□□□□ -0.53
APOBEC3F-203ENST00000476513 ZNF600Q6ZNG1 722 aa11.74□□□□□ -0.53
APOBEC3F-203ENST00000476513 PRSS48Q7RTY5 328 aa11.74□□□□□ -0.53
APOBEC3F-203ENST00000476513 TPRA1Q86W33 373 aa11.74□□□□□ -0.53
APOBEC3F-203ENST00000476513 Q8N1X5 172 aa11.74□□□□□ -0.53
APOBEC3F-203ENST00000476513 ZNF114Q8NC26 417 aa11.74□□□□□ -0.53
APOBEC3F-203ENST00000476513 FAM210BQ96KR6 192 aa11.74□□□□□ -0.53
APOBEC3F-203ENST00000476513 NDUFB11Q9NX14 153 aa11.74□□□□□ -0.53
APOBEC3F-203ENST00000476513 HERC1Q15751 4861 aa11.73□□□□□ -0.53
APOBEC3F-203ENST00000476513 NPPCP23582 126 aa11.73□□□□□ -0.53
APOBEC3F-203ENST00000476513 TNP2Q05952 138 aa11.73□□□□□ -0.53
APOBEC3F-203ENST00000476513 RNF212Q495C1 297 aa11.73□□□□□ -0.53
APOBEC3F-203ENST00000476513 LGALS14Q8TCE9 139 aa11.73□□□□□ -0.53
APOBEC3F-203ENST00000476513 DCANP1Q8TF63 244 aa11.73□□□□□ -0.53
APOBEC3F-203ENST00000476513 MOB3AQ96BX8 217 aa11.73□□□□□ -0.53
APOBEC3F-203ENST00000476513 RHBDL2Q9NX52 303 aa11.73□□□□□ -0.53
APOBEC3F-203ENST00000476513 TRAV18A0A075B6X5 111 aa11.72□□□□□ -0.53
APOBEC3F-203ENST00000476513 A0A1W2PS18 150 aa11.72□□□□□ -0.53
APOBEC3F-203ENST00000476513 NPBWR1P48145 328 aa11.72□□□□□ -0.53
APOBEC3F-203ENST00000476513 HERV-K104P61576 105 aa11.72□□□□□ -0.53
APOBEC3F-203ENST00000476513 TSPAN14Q8NG11 270 aa11.72□□□□□ -0.53
APOBEC3F-203ENST00000476513 OR5AP2Q8NGF4 316 aa11.72□□□□□ -0.53
APOBEC3F-203ENST00000476513 BORCS5Q969J3 196 aa11.72□□□□□ -0.53
APOBEC3F-203ENST00000476513 RAB40CQ96S21 281 aa11.72□□□□□ -0.53
APOBEC3F-203ENST00000476513 TSC22D3Q99576 134 aa11.72□□□□□ -0.53
APOBEC3F-203ENST00000476513 XCL2Q9UBD3 114 aa11.72□□□□□ -0.53
APOBEC3F-203ENST00000476513 DAPK2Q9UIK4 370 aa11.72□□□□□ -0.53
APOBEC3F-203ENST00000476513 TMEM50AO95807 157 aa11.71□□□□□ -0.53
APOBEC3F-203ENST00000476513 SPART-AS1P0CW21 52 aa11.71□□□□□ -0.53
APOBEC3F-203ENST00000476513 P2RY1P47900 373 aa11.71□□□□□ -0.53
APOBEC3F-203ENST00000476513 TBCEQ15813 527 aaPredicted RBP11.71□□□□□ -0.53
APOBEC3F-203ENST00000476513 ZNF367Q7RTV3 350 aa11.71□□□□□ -0.53
APOBEC3F-203ENST00000476513 VCXQ9H320 206 aa11.71□□□□□ -0.53
APOBEC3F-203ENST00000476513 CRYBB3P26998 211 aa11.7□□□□□ -0.54
APOBEC3F-203ENST00000476513 EMP1P54849 157 aa11.7□□□□□ -0.54
APOBEC3F-203ENST00000476513 PRCDQ00LT1 54 aa11.7□□□□□ -0.54
APOBEC3F-203ENST00000476513 PSMG4Q5JS54 123 aa11.7□□□□□ -0.54
APOBEC3F-203ENST00000476513 METTL26Q96S19 204 aa11.7□□□□□ -0.54
APOBEC3F-203ENST00000476513 C1QTNF4Q9BXJ3 329 aa11.7□□□□□ -0.54
APOBEC3F-203ENST00000476513 SCRT2Q9NQ03 307 aa11.7□□□□□ -0.54
APOBEC3F-203ENST00000476513 PPP5CP53041 499 aa11.69□□□□□ -0.54
APOBEC3F-203ENST00000476513 NUTF2P61970 127 aaKnown RBP11.69□□□□□ -0.54
APOBEC3F-203ENST00000476513 DHRS2Q13268 280 aa11.69□□□□□ -0.54
APOBEC3F-203ENST00000476513 DHRS11Q6UWP2 260 aa11.69□□□□□ -0.54
APOBEC3F-203ENST00000476513 SLC25A38Q96DW6 304 aa11.69□□□□□ -0.54
APOBEC3F-203ENST00000476513 NEU1Q99519 415 aa11.69□□□□□ -0.54
APOBEC3F-203ENST00000476513 APOBP04114 4563 aaKnown RBP11.69□□□□□ -0.54
APOBEC3F-203ENST00000476513 FGF9P31371 208 aaPredicted RBP11.68□□□□□ -0.54
APOBEC3F-203ENST00000476513 ERHP84090 104 aaKnown RBP11.68□□□□□ -0.54
APOBEC3F-203ENST00000476513 SFXN4Q6P4A7 337 aa11.68□□□□□ -0.54
APOBEC3F-203ENST00000476513 ZNF705AQ6ZN79 300 aaPredicted RBP11.68□□□□□ -0.54
APOBEC3F-203ENST00000476513 OR4A16Q8NH70 328 aa11.68□□□□□ -0.54
APOBEC3F-203ENST00000476513 ZNF2Q9BSG1 426 aaPredicted RBP11.68□□□□□ -0.54
APOBEC3F-203ENST00000476513 AUNIPQ9H7T9 357 aa11.68□□□□□ -0.54
APOBEC3F-203ENST00000476513 EHFQ9NZC4 300 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms