RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 IGKV1-33P01594 117 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 IGLV2-23P01705 113 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 CRYGBP07316 175 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 OR9G9P0C7N8 305 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 SAA1P0DJI8 122 aaPredicted RBP5□□□□□ -1.61
CLDN4-205ENST00000476494 CNTFRP26992 372 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 RPL12P30050 165 aaKnown RBP5□□□□□ -1.61
CLDN4-205ENST00000476494 S100A11P31949 105 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 POLR2GP62487 172 aaKnown RBP eCLIP5□□□□□ -1.61
CLDN4-205ENST00000476494 RPL8P62917 257 aaKnown RBP5□□□□□ -1.61
CLDN4-205ENST00000476494 EIF5AP63241 154 aaKnown RBP5□□□□□ -1.61
CLDN4-205ENST00000476494 BAXQ07812 192 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 PSG5Q15238 335 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 LGALSLQ3ZCW2 172 aaPredicted RBP5□□□□□ -1.61
CLDN4-205ENST00000476494 LDLRAD2Q5SZI1 272 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 C8orf86Q6ZUL3 223 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 SSX9Q7RTT3 188 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 CENPVQ7Z7K6 275 aaPredicted RBP5□□□□□ -1.61
CLDN4-205ENST00000476494 PPP1R27Q86WC6 154 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 TMEM219Q86XT9 240 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 VKORC1L1Q8N0U8 176 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 DYNAPQ8N1N2 210 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 C9orf62Q8N4C0 152 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 KCNRGQ8N5I3 272 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 OR2C3Q8N628 320 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 Q8N6K4 173 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 OR1L8Q8NGR8 309 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 EAF1Q96JC9 268 aaPredicted RBP5□□□□□ -1.61
CLDN4-205ENST00000476494 SRSF8Q9BRL6 282 aaKnown RBP5□□□□□ -1.61
CLDN4-205ENST00000476494 ENY2Q9NPA8 101 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 ZC4H2Q9NQZ6 224 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 LYRM2Q9NU23 88 aaPredicted RBP5□□□□□ -1.61
CLDN4-205ENST00000476494 PITPNC1Q9UKF7 332 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 RCL1Q9Y2P8 373 aaKnown RBP5□□□□□ -1.61
CLDN4-205ENST00000476494 HSPB11Q9Y547 144 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 OR51B2Q9Y5P1 312 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 U3KQ87 197 aa5□□□□□ -1.61
CLDN4-205ENST00000476494 IGHV3-72A0A0B4J1Y9 119 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 TEX50A0A1B0GTY4 177 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 A0A1W2PN81 502 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 KANTRA0A1W2PQU2 76 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 M0QZK8 103 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 SSSCA1O60232 199 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 NDUFA3O95167 84 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 TMEM11P17152 192 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 CHRNA7P36544 502 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 CAV2P51636 162 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 AP2S1P53680 142 aaPredicted RBP4.99□□□□□ -1.61
CLDN4-205ENST00000476494 F2RL1P55085 397 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 ERHP84090 104 aaKnown RBP4.99□□□□□ -1.61
CLDN4-205ENST00000476494 PRCDQ00LT1 54 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 HES1Q14469 280 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 MMDQ15546 238 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 PRSS8Q16651 343 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 IZUMO4Q1ZYL8 232 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 LAMTOR1Q6IAA8 161 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 TMUB2Q71RG4 321 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 C16orf82Q7Z2V1 217 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 STX12Q86Y82 276 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 DTD1Q8TEA8 209 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 RAX2Q96IS3 184 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 DUX3Q96PT4 197 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 ARPC5LQ9BPX5 153 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 QTRT1Q9BXR0 403 aaKnown RBP4.99□□□□□ -1.61
CLDN4-205ENST00000476494 GON7Q9BXV9 100 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 MAGT1Q9H0U3 335 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 RBKSQ9H477 322 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 C11orf1Q9H5F2 150 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 PLEKHA3Q9HB20 300 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 HEYLQ9NQ87 328 aaPredicted RBP4.99□□□□□ -1.61
CLDN4-205ENST00000476494 PSENENQ9NZ42 101 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 OR5AC2Q9NZP5 309 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 METTL1Q9UBP6 276 aaKnown RBP4.99□□□□□ -1.61
CLDN4-205ENST00000476494 STRAPQ9Y3F4 350 aaKnown RBP4.99□□□□□ -1.61
CLDN4-205ENST00000476494 DSCAML1Q8TD84 2053 aa4.99□□□□□ -1.61
CLDN4-205ENST00000476494 APOBP04114 4563 aaKnown RBP4.98□□□□□ -1.61
CLDN4-205ENST00000476494 TRAV3A0A0B4J244 114 aa4.98□□□□□ -1.61
CLDN4-205ENST00000476494 RNF222A6NCQ9 220 aa4.98□□□□□ -1.61
CLDN4-205ENST00000476494 FGF16O43320 207 aa4.98□□□□□ -1.61
CLDN4-205ENST00000476494 BCL2L11O43521 198 aa4.98□□□□□ -1.61
CLDN4-205ENST00000476494 CXCL2P19875 107 aa4.98□□□□□ -1.61
CLDN4-205ENST00000476494 SNCAP37840 140 aa4.98□□□□□ -1.61
CLDN4-205ENST00000476494 HTR2BP41595 481 aa4.98□□□□□ -1.61
CLDN4-205ENST00000476494 HOXA1P49639 335 aaPredicted RBP4.98□□□□□ -1.61
CLDN4-205ENST00000476494 SULT1A1P50225 295 aa4.98□□□□□ -1.61
CLDN4-205ENST00000476494 NKX2-5P52952 324 aaPredicted RBP4.98□□□□□ -1.61
CLDN4-205ENST00000476494 SUB1P53999 127 aaKnown RBP eCLIP4.98□□□□□ -1.61
CLDN4-205ENST00000476494 PAX9P55771 341 aa4.98□□□□□ -1.61
CLDN4-205ENST00000476494 OR2B8PP59922 312 aa4.98□□□□□ -1.61
CLDN4-205ENST00000476494 RAB11AP62491 216 aa4.98□□□□□ -1.61
CLDN4-205ENST00000476494 HBG1P69891 147 aa4.98□□□□□ -1.61
CLDN4-205ENST00000476494 HBG2P69892 147 aa4.98□□□□□ -1.61
CLDN4-205ENST00000476494 OPCMLQ14982 345 aa4.98□□□□□ -1.61
CLDN4-205ENST00000476494 PLGLAQ15195 96 aa4.98□□□□□ -1.61
CLDN4-205ENST00000476494 ATP6V1FQ16864 119 aa4.98□□□□□ -1.61
CLDN4-205ENST00000476494 C5orf64Q2M2E5 130 aa4.98□□□□□ -1.61
CLDN4-205ENST00000476494 EIF5AL1Q6IS14 154 aaKnown RBP4.98□□□□□ -1.61
CLDN4-205ENST00000476494 ZNF562Q6V9R5 426 aa4.98□□□□□ -1.61
CLDN4-205ENST00000476494 SLC51BQ86UW2 128 aa4.98□□□□□ -1.61
CLDN4-205ENST00000476494 Q8N1Y9 231 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms