RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 MT-CO2P00403 227 aa15.93■□□□□ 0.14
LIME1-204ENST00000476183 IFNA17P01571 189 aa15.93■□□□□ 0.14
LIME1-204ENST00000476183 IGHV3-48P01763 117 aa15.93■□□□□ 0.14
LIME1-204ENST00000476183 CD7P09564 240 aa15.93■□□□□ 0.14
LIME1-204ENST00000476183 ETV6P41212 452 aa15.93■□□□□ 0.14
LIME1-204ENST00000476183 CD81P60033 236 aa15.93■□□□□ 0.14
LIME1-204ENST00000476183 Q56UQ5 140 aa15.93■□□□□ 0.14
LIME1-204ENST00000476183 SPSB3Q6PJ21 355 aa15.93■□□□□ 0.14
LIME1-204ENST00000476183 CCDC190Q86UF4 302 aa15.93■□□□□ 0.14
LIME1-204ENST00000476183 TMEM61Q8N0U2 210 aa15.93■□□□□ 0.14
LIME1-204ENST00000476183 SLC35G3Q8N808 338 aa15.93■□□□□ 0.14
LIME1-204ENST00000476183 RBPMSQ93062 196 aaKnown RBP15.93■□□□□ 0.14
LIME1-204ENST00000476183 PALMDQ9NP74 551 aa15.93■□□□□ 0.14
LIME1-204ENST00000476183 CTSGP08311 255 aa15.92■□□□□ 0.14
LIME1-204ENST00000476183 ELLP55199 621 aaPredicted RBP15.92■□□□□ 0.14
LIME1-204ENST00000476183 DHODHQ02127 395 aa15.92■□□□□ 0.14
LIME1-204ENST00000476183 GUCA2BQ16661 112 aa15.92■□□□□ 0.14
LIME1-204ENST00000476183 ZNF57Q68EA5 555 aaPredicted RBP15.92■□□□□ 0.14
LIME1-204ENST00000476183 BTNL8Q6UX41 500 aa15.92■□□□□ 0.14
LIME1-204ENST00000476183 RNASE11Q8TAA1 199 aaKnown RBP15.92■□□□□ 0.14
LIME1-204ENST00000476183 NEURL2Q9BR09 285 aa15.92■□□□□ 0.14
LIME1-204ENST00000476183 PRR13Q9NZ81 148 aa15.92■□□□□ 0.14
LIME1-204ENST00000476183 UFC1Q9Y3C8 167 aa15.92■□□□□ 0.14
LIME1-204ENST00000476183 NBEAL2Q6ZNJ1 2754 aa15.91■□□□□ 0.14
LIME1-204ENST00000476183 S100A5P33763 92 aa15.91■□□□□ 0.14
LIME1-204ENST00000476183 TMEM187Q14656 261 aa15.91■□□□□ 0.14
LIME1-204ENST00000476183 AARDQ4LEZ3 155 aa15.91■□□□□ 0.14
LIME1-204ENST00000476183 TMEM268Q5VZI3 342 aa15.91■□□□□ 0.14
LIME1-204ENST00000476183 FAM219AQ8IW50 185 aa15.91■□□□□ 0.14
LIME1-204ENST00000476183 PINX1Q96BK5 328 aaKnown RBP15.91■□□□□ 0.14
LIME1-204ENST00000476183 GPR146Q96CH1 333 aa15.91■□□□□ 0.14
LIME1-204ENST00000476183 MRPL27Q9P0M9 148 aaKnown RBP15.91■□□□□ 0.14
LIME1-204ENST00000476183 TMEM56-RWDD3S4R434 201 aa15.91■□□□□ 0.14
LIME1-204ENST00000476183 KMT2CQ8NEZ4 4911 aaKnown RBP15.9■□□□□ 0.14
LIME1-204ENST00000476183 IGHV3OR16-8A0A075B7F1 116 aa15.9■□□□□ 0.14
LIME1-204ENST00000476183 NDUFA4O00483 81 aa15.9■□□□□ 0.14
LIME1-204ENST00000476183 RNASE2P10153 161 aaKnown RBP15.9■□□□□ 0.14
LIME1-204ENST00000476183 FCGR2BP31994 310 aaPredicted RBP15.9■□□□□ 0.14
LIME1-204ENST00000476183 MFAP4P55083 255 aa15.9■□□□□ 0.14
LIME1-204ENST00000476183 PVRIGQ6DKI7 326 aa15.9■□□□□ 0.14
LIME1-204ENST00000476183 MARC2Q969Z3 335 aa15.9■□□□□ 0.14
LIME1-204ENST00000476183 GALNT14Q96FL9 552 aa15.9■□□□□ 0.14
LIME1-204ENST00000476183 RCHY1Q96PM5 261 aa15.9■□□□□ 0.14
LIME1-204ENST00000476183 TM2D3Q9BRN9 247 aa15.9■□□□□ 0.14
LIME1-204ENST00000476183 PDCD10Q9BUL8 212 aa15.9■□□□□ 0.14
LIME1-204ENST00000476183 WFDC10AQ9H1F0 79 aa15.9■□□□□ 0.14
LIME1-204ENST00000476183 SNCAP37840 140 aa15.89■□□□□ 0.13
LIME1-204ENST00000476183 HOXA1P49639 335 aaPredicted RBP15.89■□□□□ 0.13
LIME1-204ENST00000476183 SUPT4H1P63272 117 aaKnown RBP15.89■□□□□ 0.13
LIME1-204ENST00000476183 TOMM5Q8N4H5 51 aa15.89■□□□□ 0.13
LIME1-204ENST00000476183 SCGB3A2Q96PL1 93 aa15.89■□□□□ 0.13
LIME1-204ENST00000476183 TUBA4BQ9H853 241 aa15.89■□□□□ 0.13
LIME1-204ENST00000476183 CACNG5Q9UF02 275 aa15.89■□□□□ 0.13
LIME1-204ENST00000476183 ZNF207O43670 478 aaKnown RBP15.88■□□□□ 0.13
LIME1-204ENST00000476183 SCAF4O95104 1147 aaKnown RBP15.88■□□□□ 0.13
LIME1-204ENST00000476183 AKR1C4P17516 323 aa15.88■□□□□ 0.13
LIME1-204ENST00000476183 SPCS3P61009 180 aa15.88■□□□□ 0.13
LIME1-204ENST00000476183 DEFB125Q8N687 156 aa15.88■□□□□ 0.13
LIME1-204ENST00000476183 TXN2Q99757 166 aa15.88■□□□□ 0.13
LIME1-204ENST00000476183 C20orf24Q9BUV8 137 aa15.88■□□□□ 0.13
LIME1-204ENST00000476183 DAZ1Q9NQZ3 744 aaKnown RBP15.88■□□□□ 0.13
LIME1-204ENST00000476183 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.88■□□□□ 0.13
LIME1-204ENST00000476183 NUPL2O15504 423 aaKnown RBP15.87■□□□□ 0.13
LIME1-204ENST00000476183 FAUP35544 74 aaKnown RBP15.87■□□□□ 0.13
LIME1-204ENST00000476183 AP3S2P59780 193 aa15.87■□□□□ 0.13
LIME1-204ENST00000476183 HAGHQ16775 308 aa15.87■□□□□ 0.13
LIME1-204ENST00000476183 OR52E5Q8NH55 327 aa15.87■□□□□ 0.13
LIME1-204ENST00000476183 IL22RA2Q969J5 263 aa15.87■□□□□ 0.13
LIME1-204ENST00000476183 ZMAT4Q9H898 229 aa15.87■□□□□ 0.13
LIME1-204ENST00000476183 ENY2Q9NPA8 101 aa15.87■□□□□ 0.13
LIME1-204ENST00000476183 GAR1Q9NY12 217 aaKnown RBP15.87■□□□□ 0.13
LIME1-204ENST00000476183 KCNIP3Q9Y2W7 256 aa15.87■□□□□ 0.13
LIME1-204ENST00000476183 BSXQ3C1V8 233 aa15.86■□□□□ 0.13
LIME1-204ENST00000476183 LINC00322Q6ZN03 302 aaPredicted RBP15.86■□□□□ 0.13
LIME1-204ENST00000476183 SRRQ9GZT4 340 aa15.86■□□□□ 0.13
LIME1-204ENST00000476183 TRAV25A0A0B4J276 109 aa15.85■□□□□ 0.13
LIME1-204ENST00000476183 OR11H12B2RN74 326 aa15.85■□□□□ 0.13
LIME1-204ENST00000476183 K7EMT4 169 aa15.85■□□□□ 0.13
LIME1-204ENST00000476183 RELQ04864 619 aaPredicted RBP15.85■□□□□ 0.13
LIME1-204ENST00000476183 FNDC4Q9H6D8 234 aaPredicted RBP15.85■□□□□ 0.13
LIME1-204ENST00000476183 MRPL36Q9P0J6 103 aaKnown RBP15.85■□□□□ 0.13
LIME1-204ENST00000476183 RBMY1BA6NDE4 496 aaKnown RBP15.84■□□□□ 0.13
LIME1-204ENST00000476183 RBMY1EA6NEQ0 496 aaKnown RBP15.84■□□□□ 0.13
LIME1-204ENST00000476183 C15orf62A8K5M9 175 aa15.84■□□□□ 0.13
LIME1-204ENST00000476183 GNG7O60262 68 aa15.84■□□□□ 0.13
LIME1-204ENST00000476183 RBMY1DP0C7P1 496 aaKnown RBP15.84■□□□□ 0.13
LIME1-204ENST00000476183 SUB1P53999 127 aaKnown RBP eCLIP15.84■□□□□ 0.13
LIME1-204ENST00000476183 MLANAQ16655 118 aa15.84■□□□□ 0.13
LIME1-204ENST00000476183 SPANXN2Q5MJ10 180 aa15.84■□□□□ 0.13
LIME1-204ENST00000476183 RBPMS2Q6ZRY4 209 aaKnown RBP15.84■□□□□ 0.13
LIME1-204ENST00000476183 LYZL2Q7Z4W2 148 aa15.84■□□□□ 0.13
LIME1-204ENST00000476183 OR52B4Q8NGK2 314 aa15.84■□□□□ 0.13
LIME1-204ENST00000476183 SRD5A3Q9H8P0 318 aa15.84■□□□□ 0.13
LIME1-204ENST00000476183 NXPH3O95157 252 aa15.83■□□□□ 0.12
LIME1-204ENST00000476183 NPBWR1P48145 328 aa15.83■□□□□ 0.12
LIME1-204ENST00000476183 NMSQ5H8A3 153 aa15.83■□□□□ 0.12
LIME1-204ENST00000476183 SLC16A13Q7RTY0 426 aa15.83■□□□□ 0.12
LIME1-204ENST00000476183 TMED4Q7Z7H5 227 aa15.83■□□□□ 0.12
LIME1-204ENST00000476183 DUSP18Q8NEJ0 188 aa15.83■□□□□ 0.12
LIME1-204ENST00000476183 OR10C1Q96KK4 312 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms