RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 FAM90A23PA8MXZ1 464 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 F5H697 171 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 H0Y980 276 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 H3BQ15 152 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 H3BUX3 64 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 HSPA12AO43301 675 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 IFNA5P01569 189 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 IFNA17P01571 189 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 MT-ND4LP03901 98 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 TFF1P04155 84 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 S100A9P06702 114 aaKnown RBP3.38□□□□□ -1.87
VPS13D-206ENST00000476045 SERPINE2P07093 398 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 CTXN2P0C2S0 81 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 FAM90A13PP0C7W8 464 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 FAM90A24PP0C7X0 464 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 VDAC1P21796 283 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 UCP1P25874 307 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 S100GP29377 79 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 RPS10P46783 165 aaKnown RBP3.38□□□□□ -1.87
VPS13D-206ENST00000476045 CEBPDP49716 269 aaPredicted RBP3.38□□□□□ -1.87
VPS13D-206ENST00000476045 SULT1A1P50225 295 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 PAX9P55771 341 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 NDUFA6P56556 154 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 FAM3BP58499 235 aaPredicted RBP3.38□□□□□ -1.87
VPS13D-206ENST00000476045 TIRAPP58753 221 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 OR2B8PP59922 312 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 RPL23AP62750 156 aaKnown RBP3.38□□□□□ -1.87
VPS13D-206ENST00000476045 DEFA6Q01524 100 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 MEF2CQ06413 473 aaPredicted RBP3.38□□□□□ -1.87
VPS13D-206ENST00000476045 FABP9Q0Z7S8 132 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 KIAA0141Q14154 515 aaPredicted RBP3.38□□□□□ -1.87
VPS13D-206ENST00000476045 ZNF266Q14584 549 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 RHEBQ15382 184 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 ZNF674Q2M3X9 581 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 RNF212Q495C1 297 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 NMSQ5H8A3 153 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 MINOS1Q5TGZ0 78 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 FAM53AQ6NSI3 398 aaPredicted RBP3.38□□□□□ -1.87
VPS13D-206ENST00000476045 ZNF343Q6P1L6 599 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 Q6P435 159 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 LCN15Q6UWW0 184 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 ACP7Q6ZNF0 438 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 Q6ZS49 121 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 Q6ZSV7 163 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 ZNF429Q86V71 674 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 CMTM1Q8IZ96 169 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 H1FOOQ8IZA3 346 aaPredicted RBP3.38□□□□□ -1.87
VPS13D-206ENST00000476045 Q8N7P7 452 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 LFNGQ8NES3 379 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 Q8NFD4 153 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 OR4F17Q8NGA8 305 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 OR10V1Q8NGI7 309 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 OR13D1Q8NGV5 346 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 OR10J5Q8NHC4 309 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 SCGB1C1Q8TD33 95 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 TNFRSF14Q92956 283 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 GNPNAT1Q96EK6 184 aaPredicted RBP3.38□□□□□ -1.87
VPS13D-206ENST00000476045 ABHD14BQ96IU4 210 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 OR4F4Q96R69 305 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 ATP5SQ99766 215 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 RSG1Q9BU20 258 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 GPR61Q9BZJ8 451 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 HES4Q9HCC6 221 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 LYRM2Q9NU23 88 aaPredicted RBP3.38□□□□□ -1.87
VPS13D-206ENST00000476045 PSENENQ9NZ42 101 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 GNG13Q9P2W3 67 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 CACNG5Q9UF02 275 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 TRAPPC2LQ9UL33 140 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 RNF150Q9ULK6 438 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 MINOS1-NBL1R4GNA1 71 aa3.38□□□□□ -1.87
VPS13D-206ENST00000476045 COL7A1Q02388 2944 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 TRBV6-6A0A0A6YYG2 114 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 TGIF2-C20orf24A0A0A6YYL0 155 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 A0A1B0GU03 582 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 DUXBA0A1W2PPF3 345 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 hADV38S2A0JD32 116 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 C5orf52A6NGY3 159 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 ZFP92A6NM28 416 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 ODF3BA8MYP8 253 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 LINC00587B1AMM8 73 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 AP4M1O00189 453 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 CLN5O75503 358 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 FCN3O75636 299 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 DFFBO76075 338 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 IGKV1-39P01597 117 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 IGKV1-5P01602 117 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 HBE1P02100 147 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 OPN1MWP04001 364 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 IGKV1D-39P04432 117 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 CXCL1P09341 107 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 OR8U8P0C7N1 319 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 METTL15P1P0C7V9 234 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 OPN1MW2P0DN77 364 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 OPN1MW3P0DN78 364 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 SELLP14151 372 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 F2RP25116 425 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 GABRA2P47869 451 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 FGF8P55075 233 aaPredicted RBP3.37□□□□□ -1.87
VPS13D-206ENST00000476045 TAS2R30P59541 319 aa3.37□□□□□ -1.87
VPS13D-206ENST00000476045 RAB2AP61019 212 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms