RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 A6NDX4 124 aa10.88□□□□□ -0.67
TRAF4-210ENST00000475329 H3BUX3 64 aa10.88□□□□□ -0.67
TRAF4-210ENST00000475329 SOX15O60248 233 aa10.88□□□□□ -0.67
TRAF4-210ENST00000475329 OPRK1P41145 380 aa10.88□□□□□ -0.67
TRAF4-210ENST00000475329 NDPQ00604 133 aa10.88□□□□□ -0.67
TRAF4-210ENST00000475329 PXDC1Q5TGL8 231 aa10.88□□□□□ -0.67
TRAF4-210ENST00000475329 TEPPQ6URK8 271 aa10.88□□□□□ -0.67
TRAF4-210ENST00000475329 C9orf139Q6ZV77 190 aa10.88□□□□□ -0.67
TRAF4-210ENST00000475329 OR1L6Q8NGR2 347 aa10.88□□□□□ -0.67
TRAF4-210ENST00000475329 FAM213BQ8TBF2 198 aa10.88□□□□□ -0.67
TRAF4-210ENST00000475329 MISP3Q96FF7 219 aa10.88□□□□□ -0.67
TRAF4-210ENST00000475329 PITPNC1Q9UKF7 332 aa10.88□□□□□ -0.67
TRAF4-210ENST00000475329 ABCA1O95477 2261 aa10.87□□□□□ -0.67
TRAF4-210ENST00000475329 NPIPB5A8MRT5 1133 aa10.87□□□□□ -0.67
TRAF4-210ENST00000475329 CTRB1P17538 263 aa10.87□□□□□ -0.67
TRAF4-210ENST00000475329 MFAP2P55001 183 aa10.87□□□□□ -0.67
TRAF4-210ENST00000475329 ELLP55199 621 aaPredicted RBP10.87□□□□□ -0.67
TRAF4-210ENST00000475329 ZNF616Q08AN1 781 aa10.87□□□□□ -0.67
TRAF4-210ENST00000475329 RAB31Q13636 194 aa10.87□□□□□ -0.67
TRAF4-210ENST00000475329 DEFB112Q30KQ8 113 aa10.87□□□□□ -0.67
TRAF4-210ENST00000475329 TMEM41BQ5BJD5 291 aa10.87□□□□□ -0.67
TRAF4-210ENST00000475329 CTRB2Q6GPI1 263 aa10.87□□□□□ -0.67
TRAF4-210ENST00000475329 ETFRF1Q6IPR1 90 aa10.87□□□□□ -0.67
TRAF4-210ENST00000475329 C16orf82Q7Z2V1 217 aa10.87□□□□□ -0.67
TRAF4-210ENST00000475329 TMEM144Q7Z5S9 345 aa10.87□□□□□ -0.67
TRAF4-210ENST00000475329 MGST2Q99735 147 aa10.87□□□□□ -0.67
TRAF4-210ENST00000475329 FAM103A1Q9BTL3 118 aaKnown RBP10.87□□□□□ -0.67
TRAF4-210ENST00000475329 GGTLC1Q9BX51 225 aa10.87□□□□□ -0.67
TRAF4-210ENST00000475329 LSM4Q9Y4Z0 139 aaKnown RBP10.87□□□□□ -0.67
TRAF4-210ENST00000475329 CREBBPQ92793 2442 aa10.87□□□□□ -0.67
TRAF4-210ENST00000475329 UNC79Q9P2D8 2635 aa10.87□□□□□ -0.67
TRAF4-210ENST00000475329 MDFIC2A0A1B0GVS7 189 aa10.86□□□□□ -0.67
TRAF4-210ENST00000475329 NUDT19A8MXV4 375 aa10.86□□□□□ -0.67
TRAF4-210ENST00000475329 M0QZK8 103 aa10.86□□□□□ -0.67
TRAF4-210ENST00000475329 CYB5BO43169 146 aa10.86□□□□□ -0.67
TRAF4-210ENST00000475329 MBP02144 154 aa10.86□□□□□ -0.67
TRAF4-210ENST00000475329 DEFA4P12838 97 aa10.86□□□□□ -0.67
TRAF4-210ENST00000475329 FHITP49789 147 aa10.86□□□□□ -0.67
TRAF4-210ENST00000475329 GAMTQ14353 236 aa10.86□□□□□ -0.67
TRAF4-210ENST00000475329 LY6EQ16553 131 aa10.86□□□□□ -0.67
TRAF4-210ENST00000475329 FFAR4Q5NUL3 377 aa10.86□□□□□ -0.67
TRAF4-210ENST00000475329 C19orf35Q6ZS72 473 aa10.86□□□□□ -0.67
TRAF4-210ENST00000475329 BCL6BQ8N143 479 aaPredicted RBP10.86□□□□□ -0.67
TRAF4-210ENST00000475329 C22orf15Q8WYQ4 148 aa10.86□□□□□ -0.67
TRAF4-210ENST00000475329 HSPB9Q9BQS6 159 aa10.86□□□□□ -0.67
TRAF4-210ENST00000475329 WNT10AQ9GZT5 417 aa10.86□□□□□ -0.67
TRAF4-210ENST00000475329 FNDC4Q9H6D8 234 aaPredicted RBP10.86□□□□□ -0.67
TRAF4-210ENST00000475329 ITPR3Q14573 2671 aa10.86□□□□□ -0.67
TRAF4-210ENST00000475329 CSMD2Q7Z408 3487 aa10.85□□□□□ -0.67
TRAF4-210ENST00000475329 TEX46H3BTG2 121 aa10.85□□□□□ -0.67
TRAF4-210ENST00000475329 AGPAT2O15120 278 aa10.85□□□□□ -0.67
TRAF4-210ENST00000475329 CRYGCP07315 174 aa10.85□□□□□ -0.67
TRAF4-210ENST00000475329 ASPHD1Q5U4P2 390 aa10.85□□□□□ -0.67
TRAF4-210ENST00000475329 ACSM6Q6P461 480 aa10.85□□□□□ -0.67
TRAF4-210ENST00000475329 IL34Q6ZMJ4 242 aa10.85□□□□□ -0.67
TRAF4-210ENST00000475329 TTC9CQ8N5M4 171 aa10.85□□□□□ -0.67
TRAF4-210ENST00000475329 SGMS2Q8NHU3 365 aa10.85□□□□□ -0.67
TRAF4-210ENST00000475329 ACY3Q96HD9 319 aa10.85□□□□□ -0.67
TRAF4-210ENST00000475329 CITED4Q96RK1 184 aa10.85□□□□□ -0.67
TRAF4-210ENST00000475329 HRH4Q9H3N8 390 aa10.85□□□□□ -0.67
TRAF4-210ENST00000475329 RPRMQ9NS64 109 aa10.85□□□□□ -0.67
TRAF4-210ENST00000475329 BTBD17A6NE02 478 aa10.84□□□□□ -0.67
TRAF4-210ENST00000475329 MFSD2BA6NFX1 497 aa10.84□□□□□ -0.67
TRAF4-210ENST00000475329 ATP6V0E1O15342 81 aa10.84□□□□□ -0.67
TRAF4-210ENST00000475329 CD5LO43866 347 aa10.84□□□□□ -0.67
TRAF4-210ENST00000475329 TSPAN15O95858 294 aa10.84□□□□□ -0.67
TRAF4-210ENST00000475329 EGR2P11161 476 aaPredicted RBP10.84□□□□□ -0.67
TRAF4-210ENST00000475329 RAB2AP61019 212 aa10.84□□□□□ -0.67
TRAF4-210ENST00000475329 MLANAQ16655 118 aa10.84□□□□□ -0.67
TRAF4-210ENST00000475329 ACOT6Q3I5F7 207 aaPredicted RBP10.84□□□□□ -0.67
TRAF4-210ENST00000475329 LFNGQ8NES3 379 aa10.84□□□□□ -0.67
TRAF4-210ENST00000475329 OR5R1Q8NH85 324 aa10.84□□□□□ -0.67
TRAF4-210ENST00000475329 OR2T6Q8NHC8 308 aa10.84□□□□□ -0.67
TRAF4-210ENST00000475329 LYPD6BQ8NI32 183 aa10.84□□□□□ -0.67
TRAF4-210ENST00000475329 MARC2Q969Z3 335 aa10.84□□□□□ -0.67
TRAF4-210ENST00000475329 VSIRQ9H7M9 311 aa10.84□□□□□ -0.67
TRAF4-210ENST00000475329 DMRT1Q9Y5R6 373 aa10.84□□□□□ -0.67
TRAF4-210ENST00000475329 PXMP4Q9Y6I8 212 aa10.84□□□□□ -0.67
TRAF4-210ENST00000475329 TEX15Q9BXT5 2789 aa10.84□□□□□ -0.67
TRAF4-210ENST00000475329 MAP1AP78559 2803 aaPredicted RBP10.83□□□□□ -0.68
TRAF4-210ENST00000475329 SH2D7A6NKC9 451 aaPredicted RBP10.83□□□□□ -0.68
TRAF4-210ENST00000475329 MT-CO2P00403 227 aa10.83□□□□□ -0.68
TRAF4-210ENST00000475329 IGHV4-59P01825 116 aa10.83□□□□□ -0.68
TRAF4-210ENST00000475329 HBE1P02100 147 aa10.83□□□□□ -0.68
TRAF4-210ENST00000475329 AMY1AP04745 511 aa10.83□□□□□ -0.68
TRAF4-210ENST00000475329 H2AFB1P0C5Y9 115 aa10.83□□□□□ -0.68
TRAF4-210ENST00000475329 M6PRP20645 277 aa10.83□□□□□ -0.68
TRAF4-210ENST00000475329 S100A1P23297 94 aa10.83□□□□□ -0.68
TRAF4-210ENST00000475329 OR10J1P30954 320 aa10.83□□□□□ -0.68
TRAF4-210ENST00000475329 RPL29P47914 159 aaKnown RBP10.83□□□□□ -0.68
TRAF4-210ENST00000475329 RND2P52198 227 aa10.83□□□□□ -0.68
TRAF4-210ENST00000475329 ECSCRQ19T08 205 aa10.83□□□□□ -0.68
TRAF4-210ENST00000475329 MIC13Q5XKP0 118 aa10.83□□□□□ -0.68
TRAF4-210ENST00000475329 UNQ5815/PRO19632Q6UWF5 114 aa10.83□□□□□ -0.68
TRAF4-210ENST00000475329 SPNS3Q6ZMD2 512 aa10.83□□□□□ -0.68
TRAF4-210ENST00000475329 COMMD1Q8N668 190 aa10.83□□□□□ -0.68
TRAF4-210ENST00000475329 THAP8Q8NA92 274 aa10.83□□□□□ -0.68
TRAF4-210ENST00000475329 FAM110DQ8TAY7 271 aaPredicted RBP10.83□□□□□ -0.68
TRAF4-210ENST00000475329 RCC1LQ96I51 464 aaKnown RBP10.83□□□□□ -0.68
TRAF4-210ENST00000475329 TMEM68Q96MH6 324 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms