RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 PINX1Q96BK5 328 aaKnown RBP18.22■□□□□ 0.51
TMEM54-205ENST00000475208 GINS3Q9BRX5 216 aa18.22■□□□□ 0.51
TMEM54-205ENST00000475208 EIF4EP06730 217 aaKnown RBP18.21■□□□□ 0.51
TMEM54-205ENST00000475208 TGFBR1P36897 503 aa18.21■□□□□ 0.51
TMEM54-205ENST00000475208 PRR20EP86478 221 aa18.21■□□□□ 0.51
TMEM54-205ENST00000475208 PRR20CP86479 221 aa18.21■□□□□ 0.51
TMEM54-205ENST00000475208 PRR20DP86480 221 aa18.21■□□□□ 0.51
TMEM54-205ENST00000475208 PRR20BP86481 221 aa18.21■□□□□ 0.51
TMEM54-205ENST00000475208 PRR20AP86496 221 aa18.21■□□□□ 0.51
TMEM54-205ENST00000475208 PRCDQ00LT1 54 aa18.21■□□□□ 0.51
TMEM54-205ENST00000475208 CROCCP3Q8IVE0 287 aa18.21■□□□□ 0.51
TMEM54-205ENST00000475208 SAMD12Q8N8I0 201 aa18.21■□□□□ 0.51
TMEM54-205ENST00000475208 ST8SIA2Q92186 375 aa18.21■□□□□ 0.51
TMEM54-205ENST00000475208 SEC22AQ96IW7 307 aa18.21■□□□□ 0.51
TMEM54-205ENST00000475208 FAM212BQ9NTI7 297 aaPredicted RBP18.21■□□□□ 0.51
TMEM54-205ENST00000475208 HLA-DMAP28067 261 aa18.2■□□□□ 0.5
TMEM54-205ENST00000475208 S100GP29377 79 aa18.2■□□□□ 0.5
TMEM54-205ENST00000475208 TMEM187Q14656 261 aa18.2■□□□□ 0.5
TMEM54-205ENST00000475208 TOMM20LQ6UXN7 152 aa18.2■□□□□ 0.5
TMEM54-205ENST00000475208 H2BFWTQ7Z2G1 175 aa18.2■□□□□ 0.5
TMEM54-205ENST00000475208 TBC1D26Q86UD7 250 aa18.2■□□□□ 0.5
TMEM54-205ENST00000475208 C2CD4CQ8TF44 421 aa18.2■□□□□ 0.5
TMEM54-205ENST00000475208 ST8SIA3O43173 380 aa18.19■□□□□ 0.5
TMEM54-205ENST00000475208 IGKV1-39P01597 117 aa18.19■□□□□ 0.5
TMEM54-205ENST00000475208 IGKV1D-39P04432 117 aa18.19■□□□□ 0.5
TMEM54-205ENST00000475208 CD5P06127 495 aa18.19■□□□□ 0.5
TMEM54-205ENST00000475208 PRSS3P35030 304 aa18.19■□□□□ 0.5
TMEM54-205ENST00000475208 DEFB131AP59861 70 aa18.19■□□□□ 0.5
TMEM54-205ENST00000475208 LEMD1Q68G75 181 aa18.19■□□□□ 0.5
TMEM54-205ENST00000475208 LYSMD2Q8IV50 215 aa18.19■□□□□ 0.5
TMEM54-205ENST00000475208 MRGPRFQ96AM1 343 aa18.19■□□□□ 0.5
TMEM54-205ENST00000475208 MS4A6AQ9H2W1 248 aa18.19■□□□□ 0.5
TMEM54-205ENST00000475208 VSIRQ9H7M9 311 aa18.19■□□□□ 0.5
TMEM54-205ENST00000475208 DNAH6Q9C0G6 4158 aa18.19■□□□□ 0.5
TMEM54-205ENST00000475208 IGHV3-66A0A0C4DH42 116 aa18.18■□□□□ 0.5
TMEM54-205ENST00000475208 DNASE2O00115 360 aaPredicted RBP18.18■□□□□ 0.5
TMEM54-205ENST00000475208 APOHP02749 345 aaPredicted RBP18.18■□□□□ 0.5
TMEM54-205ENST00000475208 LPCAT3Q6P1A2 487 aa18.18■□□□□ 0.5
TMEM54-205ENST00000475208 LILRB2Q8N423 598 aa18.18■□□□□ 0.5
TMEM54-205ENST00000475208 DFFBO76075 338 aa18.17■□□□□ 0.5
TMEM54-205ENST00000475208 TCTAP57738 103 aa18.17■□□□□ 0.5
TMEM54-205ENST00000475208 HSPE1P61604 102 aaKnown RBP18.17■□□□□ 0.5
TMEM54-205ENST00000475208 TSPAN5P62079 268 aa18.17■□□□□ 0.5
TMEM54-205ENST00000475208 ERHP84090 104 aaKnown RBP18.17■□□□□ 0.5
TMEM54-205ENST00000475208 FAM24BQ8N5W8 94 aa18.17■□□□□ 0.5
TMEM54-205ENST00000475208 PUS1Q9Y606 427 aaKnown RBP eCLIP18.17■□□□□ 0.5
TMEM54-205ENST00000475208 RPS19P39019 145 aaKnown RBP18.16■□□□□ 0.5
TMEM54-205ENST00000475208 NPBWR1P48145 328 aa18.16■□□□□ 0.5
TMEM54-205ENST00000475208 RPL11P62913 178 aaKnown RBP18.16■□□□□ 0.5
TMEM54-205ENST00000475208 SPINK9Q5DT21 86 aa18.16■□□□□ 0.5
TMEM54-205ENST00000475208 YIPF6Q96EC8 236 aa18.16■□□□□ 0.5
TMEM54-205ENST00000475208 ZFAND3Q9H8U3 227 aa18.16■□□□□ 0.5
TMEM54-205ENST00000475208 A0A087WXM4 84 aa18.15■□□□□ 0.5
TMEM54-205ENST00000475208 TRAV2A0A0B4J234 112 aa18.15■□□□□ 0.5
TMEM54-205ENST00000475208 ZNF600Q6ZNG1 722 aa18.15■□□□□ 0.5
TMEM54-205ENST00000475208 DUSP18Q8NEJ0 188 aa18.15■□□□□ 0.5
TMEM54-205ENST00000475208 GPX8Q8TED1 209 aa18.15■□□□□ 0.5
TMEM54-205ENST00000475208 TNFAIP8O95379 198 aa18.14■□□□□ 0.49
TMEM54-205ENST00000475208 STHQ8IWL8 128 aa18.14■□□□□ 0.49
TMEM54-205ENST00000475208 Q8NAQ8 132 aa18.14■□□□□ 0.49
TMEM54-205ENST00000475208 RABAC1Q9UI14 185 aa18.14■□□□□ 0.49
TMEM54-205ENST00000475208 IGLL5B9A064 214 aa18.13■□□□□ 0.49
TMEM54-205ENST00000475208 IZUMO4Q1ZYL8 232 aa18.13■□□□□ 0.49
TMEM54-205ENST00000475208 APLNQ9ULZ1 77 aa18.13■□□□□ 0.49
TMEM54-205ENST00000475208 A0A1B0GU03 582 aa18.12■□□□□ 0.49
TMEM54-205ENST00000475208 UCP3P55916 312 aa18.12■□□□□ 0.49
TMEM54-205ENST00000475208 LSM3P62310 102 aaKnown RBP18.12■□□□□ 0.49
TMEM54-205ENST00000475208 TMEM231Q9H6L2 316 aa18.12■□□□□ 0.49
TMEM54-205ENST00000475208 VCX3AQ9NNX9 186 aa18.12■□□□□ 0.49
TMEM54-205ENST00000475208 C11orf94C9JXX5 98 aa18.11■□□□□ 0.49
TMEM54-205ENST00000475208 TMEM50AO95807 157 aa18.11■□□□□ 0.49
TMEM54-205ENST00000475208 SNCAP37840 140 aa18.11■□□□□ 0.49
TMEM54-205ENST00000475208 SLC35G3Q8N808 338 aa18.11■□□□□ 0.49
TMEM54-205ENST00000475208 HRH4Q9H3N8 390 aa18.11■□□□□ 0.49
TMEM54-205ENST00000475208 IGHV4-28A0A0C4DH34 117 aa18.1■□□□□ 0.49
TMEM54-205ENST00000475208 GIG44P09565 113 aaPredicted RBP18.1■□□□□ 0.49
TMEM54-205ENST00000475208 SNX29P2Q8IUI4 249 aa18.1■□□□□ 0.49
TMEM54-205ENST00000475208 IGKV1-5P01602 117 aa18.09■□□□□ 0.49
TMEM54-205ENST00000475208 RBMY1A1P0DJD3 496 aaKnown RBP18.09■□□□□ 0.49
TMEM54-205ENST00000475208 RBMY1CP0DJD4 496 aa18.09■□□□□ 0.49
TMEM54-205ENST00000475208 NPPCP23582 126 aa18.09■□□□□ 0.49
TMEM54-205ENST00000475208 RCVRNP35243 200 aa18.09■□□□□ 0.49
TMEM54-205ENST00000475208 RBMY1FQ15415 496 aaKnown RBP18.09■□□□□ 0.49
TMEM54-205ENST00000475208 TRPT1Q86TN4 253 aaKnown RBP18.09■□□□□ 0.49
TMEM54-205ENST00000475208 STXBP6Q8NFX7 210 aa18.09■□□□□ 0.49
TMEM54-205ENST00000475208 SCPEP1Q9HB40 452 aa18.09■□□□□ 0.49
TMEM54-205ENST00000475208 KIAA1109Q2LD37 5005 aa18.09■□□□□ 0.49
TMEM54-205ENST00000475208 INS-IGF2F8WCM5 200 aa18.08■□□□□ 0.48
TMEM54-205ENST00000475208 SMIM31A0A1B0GVY4 71 aa18.07■□□□□ 0.48
TMEM54-205ENST00000475208 A0A1W2PS18 150 aa18.07■□□□□ 0.48
TMEM54-205ENST00000475208 K7EQG2 157 aa18.07■□□□□ 0.48
TMEM54-205ENST00000475208 CORTO00230 105 aa18.07■□□□□ 0.48
TMEM54-205ENST00000475208 IFNA17P01571 189 aa18.07■□□□□ 0.48
TMEM54-205ENST00000475208 RNASE2P10153 161 aaKnown RBP18.07■□□□□ 0.48
TMEM54-205ENST00000475208 SPP1P10451 314 aa18.07■□□□□ 0.48
TMEM54-205ENST00000475208 MIFP14174 115 aa18.07■□□□□ 0.48
TMEM54-205ENST00000475208 C4BPBP20851 252 aa18.07■□□□□ 0.48
TMEM54-205ENST00000475208 HLA-DMBP28068 263 aa18.07■□□□□ 0.48
TMEM54-205ENST00000475208 AKR1C2P52895 323 aa18.07■□□□□ 0.48
TMEM54-205ENST00000475208 TMEM41BQ5BJD5 291 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms