RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 SPINK9Q5DT21 86 aa3.39□□□□□ -1.87
GAPVD1-216ENST00000474637 SLC35E4Q6ICL7 350 aa3.39□□□□□ -1.87
GAPVD1-216ENST00000474637 DUX4L9Q6RFH8 374 aaPredicted RBP3.39□□□□□ -1.87
GAPVD1-216ENST00000474637 IL17RELQ6ZVW7 336 aa3.39□□□□□ -1.87
GAPVD1-216ENST00000474637 RPP25LQ8N5L8 163 aaKnown RBP3.39□□□□□ -1.87
GAPVD1-216ENST00000474637 RNASEH2CQ8TDP1 164 aaKnown RBP3.39□□□□□ -1.87
GAPVD1-216ENST00000474637 ZNF418Q8TF45 676 aaPredicted RBP3.39□□□□□ -1.87
GAPVD1-216ENST00000474637 MBD3L1Q8WWY6 194 aa3.39□□□□□ -1.87
GAPVD1-216ENST00000474637 TAF15Q92804 592 aaKnown RBP eCLIP3.39□□□□□ -1.87
GAPVD1-216ENST00000474637 WDR61Q9GZS3 305 aaKnown RBP3.39□□□□□ -1.87
GAPVD1-216ENST00000474637 SIRPDQ9H106 197 aa3.39□□□□□ -1.87
GAPVD1-216ENST00000474637 ZFAND3Q9H8U3 227 aa3.39□□□□□ -1.87
GAPVD1-216ENST00000474637 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.39□□□□□ -1.87
GAPVD1-216ENST00000474637 SLC39A9Q9NUM3 307 aa3.39□□□□□ -1.87
GAPVD1-216ENST00000474637 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.39□□□□□ -1.872e-8■■■□□ 17.6
GAPVD1-216ENST00000474637 ABCA2Q9BZC7 2435 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 UBE2L5PA0A1B0GUS4 154 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 ODAMA1E959 279 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 LINC00473A8K010 186 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 RNF212BA8MTL3 300 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 CEBPZOSA8MTT3 80 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 AVPP01185 164 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 IGKV1D-33P01593 117 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 IGKV1-33P01594 117 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 IGHV3-7P01780 117 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 EDDM3BP56851 147 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 ARF6P62330 175 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 SLC38A11Q08AI6 406 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 RNF151Q2KHN1 245 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 KRTAP21-3Q3LHN1 58 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 TMEM41BQ5BJD5 291 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 FAM90A2PQ658T7 463 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 TMEM200BQ69YZ2 307 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 TMEM14EPQ6UXP3 125 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 C1orf229Q6ZS94 237 aaPredicted RBP3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 VMO1Q7Z5L0 202 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 SLC35E3Q7Z769 313 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 ZBTB34Q8NCN2 500 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 OR10A7Q8NGE5 316 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 OR13A1Q8NGR1 328 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 RNASE8Q8TDE3 154 aaKnown RBP3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 CORO2AQ92828 525 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 LHX4Q969G2 390 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 RCC1LQ96I51 464 aaKnown RBP3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 TBX15Q96SF7 602 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 AGMATQ9BSE5 352 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 PCGF1Q9BSM1 259 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 PSMG3Q9BT73 122 aaPredicted RBP3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 GAL3ST2Q9H3Q3 398 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 RAB9BQ9NP90 201 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 HSPB7Q9UBY9 170 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 FUT9Q9Y231 359 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 LINC00312Q9Y6C7 94 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 ANK3Q12955 4377 aaKnown RBP3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 HIVEP2P31629 2446 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 ABCA1O95477 2261 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 MALRD1Q5VYJ5 2156 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 TRGV10A0A0A0MS01 117 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 IGHV1-69DA0A0B4J2H0 117 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 A0A1B0GUS0 222 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 A0A1W2PPQ1 181 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 FAM90A26D6RGX4 464 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 PROP1O75360 226 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 HPRT1P00492 218 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 IGHV1-69P01742 117 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 LINC00614P0C842 121 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 BCL2P10415 239 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 PRTN3P24158 256 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 BRS3P32247 399 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 UBE2E1P51965 193 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 EIF4EBP1Q13541 118 aaPredicted RBP3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 EDDM3AQ14507 147 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 MSMO1Q15800 293 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 ADIRFQ15847 76 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 KIAA2026Q5HYC2 2103 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 CST9LP1Q5W188 147 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 H2BFWTQ7Z2G1 175 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 OR10P1Q8NGE3 313 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 TMEM18Q96B42 140 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 PINX1Q96BK5 328 aaKnown RBP3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 ZNF714Q96N38 554 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 DNAJC4Q9NNZ3 241 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 FKBP11Q9NYL4 201 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 OR6C3Q9NZP0 311 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 PSG11Q9UQ72 335 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 PAM16Q9Y3D7 125 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 ACANP16112 2415 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 DOCK11Q5JSL3 2073 aa3.38□□□□□ -1.87
GAPVD1-216ENST00000474637 TRAV40A0A0B4J280 105 aa3.37□□□□□ -1.87
GAPVD1-216ENST00000474637 MAP1LC3B2A6NCE7 125 aa3.37□□□□□ -1.87
GAPVD1-216ENST00000474637 PMS2P5A8MQ11 134 aa3.37□□□□□ -1.87
GAPVD1-216ENST00000474637 PPP5D1E7EU14 171 aa3.37□□□□□ -1.87
GAPVD1-216ENST00000474637 SPINT2O43291 252 aa3.37□□□□□ -1.87
GAPVD1-216ENST00000474637 P0C879 139 aa3.37□□□□□ -1.87
GAPVD1-216ENST00000474637 GZMHP20718 246 aa3.37□□□□□ -1.87
GAPVD1-216ENST00000474637 GAGE1Q13065 139 aa3.37□□□□□ -1.87
GAPVD1-216ENST00000474637 CATR1Q13166 79 aa3.37□□□□□ -1.87
GAPVD1-216ENST00000474637 AARDQ4LEZ3 155 aa3.37□□□□□ -1.87
GAPVD1-216ENST00000474637 KLF17Q5JT82 389 aaPredicted RBP3.37□□□□□ -1.87
GAPVD1-216ENST00000474637 SAPCD1Q5SSQ6 148 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms