RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 TMEM241Q24JQ0 296 aa17.47■□□□□ 0.39
CCM2-206ENST00000474617 PQLC2Q6ZP29 291 aa17.47■□□□□ 0.39
CCM2-206ENST00000474617 OR1L4Q8NGR5 311 aa17.47■□□□□ 0.39
CCM2-206ENST00000474617 OR4F5Q8NH21 305 aa17.47■□□□□ 0.39
CCM2-206ENST00000474617 OR4F4Q96R69 305 aa17.47■□□□□ 0.39
CCM2-206ENST00000474617 PFDN5Q99471 154 aa17.47■□□□□ 0.39
CCM2-206ENST00000474617 SPOCK3Q9BQ16 436 aa17.47■□□□□ 0.39
CCM2-206ENST00000474617 TMPRSS5Q9H3S3 457 aa17.47■□□□□ 0.39
CCM2-206ENST00000474617 TECRQ9NZ01 308 aaKnown RBP17.47■□□□□ 0.39
CCM2-206ENST00000474617 IGHV2-70DA0A0C4DH43 119 aa17.46■□□□□ 0.39
CCM2-206ENST00000474617 TIMM23O14925 209 aa17.46■□□□□ 0.39
CCM2-206ENST00000474617 OR5G3P0C626 314 aa17.46■□□□□ 0.39
CCM2-206ENST00000474617 ARL14EPLP0DKL9 152 aa17.46■□□□□ 0.39
CCM2-206ENST00000474617 GCSAMLQ5JQS6 135 aa17.46■□□□□ 0.39
CCM2-206ENST00000474617 MALSU1Q96EH3 234 aa17.46■□□□□ 0.39
CCM2-206ENST00000474617 POLR3KQ9Y2Y1 108 aaPredicted RBP17.46■□□□□ 0.39
CCM2-206ENST00000474617 E7EUB6 86 aa17.45■□□□□ 0.38
CCM2-206ENST00000474617 NDUFS8O00217 210 aa17.45■□□□□ 0.38
CCM2-206ENST00000474617 HMGB3O15347 200 aaKnown RBP17.45■□□□□ 0.38
CCM2-206ENST00000474617 NBR2O15453 112 aa17.45■□□□□ 0.38
CCM2-206ENST00000474617 NDUFA3O95167 84 aa17.45■□□□□ 0.38
CCM2-206ENST00000474617 CRYGCP07315 174 aa17.45■□□□□ 0.38
CCM2-206ENST00000474617 OR10J1P30954 320 aa17.45■□□□□ 0.38
CCM2-206ENST00000474617 HCP5Q6MZN7 132 aa17.45■□□□□ 0.38
CCM2-206ENST00000474617 OR2T10Q8NGZ9 312 aa17.45■□□□□ 0.38
CCM2-206ENST00000474617 ABHD5Q8WTS1 349 aa17.45■□□□□ 0.38
CCM2-206ENST00000474617 IGFBPL1Q8WX77 278 aa17.45■□□□□ 0.38
CCM2-206ENST00000474617 CFHR4Q92496 578 aa17.45■□□□□ 0.38
CCM2-206ENST00000474617 HIST1H2BAQ96A08 127 aa17.45■□□□□ 0.38
CCM2-206ENST00000474617 RITA1Q96K30 269 aa17.45■□□□□ 0.38
CCM2-206ENST00000474617 GCHFRP30047 84 aa17.44■□□□□ 0.38
CCM2-206ENST00000474617 LGALS4P56470 323 aa17.44■□□□□ 0.38
CCM2-206ENST00000474617 BPIFB3P59826 476 aa17.44■□□□□ 0.38
CCM2-206ENST00000474617 VMO1Q7Z5L0 202 aa17.44■□□□□ 0.38
CCM2-206ENST00000474617 TPSG1Q9NRR2 321 aa17.44■□□□□ 0.38
CCM2-206ENST00000474617 DOK5Q9P104 306 aa17.44■□□□□ 0.38
CCM2-206ENST00000474617 TCRBV4S1A1TA0A5B7 111 aa17.43■□□□□ 0.38
CCM2-206ENST00000474617 AREGP15514 252 aa17.43■□□□□ 0.38
CCM2-206ENST00000474617 RAB5BP61020 215 aa17.43■□□□□ 0.38
CCM2-206ENST00000474617 PLGLAQ15195 96 aa17.43■□□□□ 0.38
CCM2-206ENST00000474617 C10orf55Q5SWW7 151 aa17.43■□□□□ 0.38
CCM2-206ENST00000474617 SIRPDQ9H106 197 aa17.43■□□□□ 0.38
CCM2-206ENST00000474617 F11RQ9Y624 299 aaKnown RBP17.43■□□□□ 0.38
CCM2-206ENST00000474617 IGKV1OR2-108A0A075B7D4 117 aa17.42■□□□□ 0.38
CCM2-206ENST00000474617 UBE2E1P51965 193 aa17.42■□□□□ 0.38
CCM2-206ENST00000474617 EBI3Q14213 229 aa17.42■□□□□ 0.38
CCM2-206ENST00000474617 FAM78BQ5VT40 261 aa17.42■□□□□ 0.38
CCM2-206ENST00000474617 TMEM116Q8NCL8 245 aa17.42■□□□□ 0.38
CCM2-206ENST00000474617 PARLQ9H300 379 aa17.42■□□□□ 0.38
CCM2-206ENST00000474617 LPAR2Q9HBW0 351 aa17.42■□□□□ 0.38
CCM2-206ENST00000474617 ELOA3CA0A087WX78 387 aaPredicted RBP17.42■□□□□ 0.38
CCM2-206ENST00000474617 CLDN34H7C241 214 aa17.42■□□□□ 0.38
CCM2-206ENST00000474617 TGOLN2O43493 480 aa17.42■□□□□ 0.38
CCM2-206ENST00000474617 AKR1C3P42330 323 aa17.42■□□□□ 0.38
CCM2-206ENST00000474617 MMDQ15546 238 aa17.42■□□□□ 0.38
CCM2-206ENST00000474617 SRSF12Q8WXF0 261 aaKnown RBP17.42■□□□□ 0.38
CCM2-206ENST00000474617 ACY3Q96HD9 319 aa17.42■□□□□ 0.38
CCM2-206ENST00000474617 UHRF2Q96PU4 802 aa17.42■□□□□ 0.38
CCM2-206ENST00000474617 TRGV9Q99603 122 aa17.42■□□□□ 0.38
CCM2-206ENST00000474617 SEPSECSQ9HD40 501 aaKnown RBP17.42■□□□□ 0.38
CCM2-206ENST00000474617 C1orf196B1AJZ1 125 aa17.41■□□□□ 0.38
CCM2-206ENST00000474617 TEX22C9J3V5 150 aa17.41■□□□□ 0.38
CCM2-206ENST00000474617 CRYBA1P05813 215 aa17.41■□□□□ 0.38
CCM2-206ENST00000474617 HOXB4P17483 251 aaPredicted RBP17.41■□□□□ 0.38
CCM2-206ENST00000474617 RAB5AP20339 215 aa17.41■□□□□ 0.38
CCM2-206ENST00000474617 LMO4P61968 165 aa17.41■□□□□ 0.38
CCM2-206ENST00000474617 YPEL4Q96NS1 127 aa17.41■□□□□ 0.38
CCM2-206ENST00000474617 FBXL15Q9H469 300 aa17.41■□□□□ 0.38
CCM2-206ENST00000474617 DNAJC4Q9NNZ3 241 aa17.41■□□□□ 0.38
CCM2-206ENST00000474617 C8orf88P0DMB2 117 aa17.4■□□□□ 0.38
CCM2-206ENST00000474617 ZFP36P26651 326 aaKnown RBP17.4■□□□□ 0.38
CCM2-206ENST00000474617 RND2P52198 227 aa17.4■□□□□ 0.38
CCM2-206ENST00000474617 CST9LP1Q5W188 147 aa17.4■□□□□ 0.38
CCM2-206ENST00000474617 C1QL4Q86Z23 238 aa17.4■□□□□ 0.38
CCM2-206ENST00000474617 STXBP6Q8NFX7 210 aa17.4■□□□□ 0.38
CCM2-206ENST00000474617 TMEM190Q8WZ59 177 aa17.4■□□□□ 0.38
CCM2-206ENST00000474617 ANAPC16Q96DE5 110 aa17.4■□□□□ 0.38
CCM2-206ENST00000474617 PIMREGQ9BSJ6 248 aa17.4■□□□□ 0.38
CCM2-206ENST00000474617 FNDC4Q9H6D8 234 aaPredicted RBP17.4■□□□□ 0.38
CCM2-206ENST00000474617 TOX4O94842 621 aa17.39■□□□□ 0.37
CCM2-206ENST00000474617 FABP1P07148 127 aa17.39■□□□□ 0.37
CCM2-206ENST00000474617 CD99P14209 185 aa17.39■□□□□ 0.37
CCM2-206ENST00000474617 CNTFRP26992 372 aa17.39■□□□□ 0.37
CCM2-206ENST00000474617 DLX1P56177 255 aa17.39■□□□□ 0.37
CCM2-206ENST00000474617 RPUSD4Q96CM3 377 aaKnown RBP17.39■□□□□ 0.37
CCM2-206ENST00000474617 EAF1Q96JC9 268 aaPredicted RBP17.39■□□□□ 0.37
CCM2-206ENST00000474617 CCL19Q99731 98 aa17.39■□□□□ 0.37
CCM2-206ENST00000474617 SSX3Q99909 188 aa17.39■□□□□ 0.37
CCM2-206ENST00000474617 BPESC1Q9GZL8 116 aa17.39■□□□□ 0.37
CCM2-206ENST00000474617 C1RLQ9NZP8 487 aa17.39■□□□□ 0.37
CCM2-206ENST00000474617 NDUFS7O75251 213 aa17.38■□□□□ 0.37
CCM2-206ENST00000474617 GNB1P62873 340 aa17.38■□□□□ 0.37
CCM2-206ENST00000474617 OR2T6Q8NHC8 308 aa17.38■□□□□ 0.37
CCM2-206ENST00000474617 NPIPB3Q92617 1050 aa17.38■□□□□ 0.37
CCM2-206ENST00000474617 C11orf52Q96A22 123 aa17.38■□□□□ 0.37
CCM2-206ENST00000474617 SLC25A33Q9BSK2 321 aa17.38■□□□□ 0.37
CCM2-206ENST00000474617 HILPDAQ9Y5L2 63 aa17.38■□□□□ 0.37
CCM2-206ENST00000474617 HRNRQ86YZ3 2850 aaPredicted RBP17.38■□□□□ 0.37
CCM2-206ENST00000474617 SMG1Q96Q15 3661 aaKnown RBP17.38■□□□□ 0.37
CCM2-206ENST00000474617 COX7A2P2O60397 106 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms