RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 MT-CO2P00403 227 aa7.86□□□□□ -1.15
USP39-214ENST00000474572 CXCL1P09341 107 aa7.86□□□□□ -1.15
USP39-214ENST00000474572 COX7A1P24310 79 aa7.86□□□□□ -1.15
USP39-214ENST00000474572 HTR1DP28221 377 aa7.86□□□□□ -1.15
USP39-214ENST00000474572 GPR6P46095 362 aaPredicted RBP7.86□□□□□ -1.15
USP39-214ENST00000474572 MLANAQ16655 118 aa7.86□□□□□ -1.15
USP39-214ENST00000474572 PPP1R27Q86WC6 154 aa7.86□□□□□ -1.15
USP39-214ENST00000474572 RPUSD4Q96CM3 377 aaKnown RBP7.86□□□□□ -1.15
USP39-214ENST00000474572 ZNF503Q96F45 646 aa7.86□□□□□ -1.15
USP39-214ENST00000474572 PYGO2Q9BRQ0 406 aa7.86□□□□□ -1.15
USP39-214ENST00000474572 DPM3Q9P2X0 92 aa7.86□□□□□ -1.15
USP39-214ENST00000474572 ONECUT1Q9UBC0 465 aa7.86□□□□□ -1.15
USP39-214ENST00000474572 TNCP24821 2201 aa7.86□□□□□ -1.15
USP39-214ENST00000474572 TRBV24-1A0A075B6N3 115 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 TCRBV4S1A1TA0A5B7 111 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 C5orf52A6NGY3 159 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 OOSP1A8MZH6 123 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 OVOL3O00110 214 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 CORTO00230 105 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 TGOLN2O43493 480 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 TSPAN9O75954 239 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 IGHV2-5P01817 119 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 EFNA4P52798 201 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 MFAP2P55001 183 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 ARF6P62330 175 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 SELENOTP62341 195 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 SSX2Q16385 188 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 FAM78BQ5VT40 261 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 ETFRF1Q6IPR1 90 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 ZNF343Q6P1L6 599 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 PQLC2Q6ZP29 291 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 MIR17HGQ75NE6 70 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 IQCF2Q8IXL9 164 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 NPBQ8NG41 125 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 OR1P1Q8NH06 330 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 ANAPC16Q96DE5 110 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 TMEM167BQ9NRX6 74 aa7.85□□□□□ -1.15
USP39-214ENST00000474572 TECRQ9NZ01 308 aaKnown RBP7.85□□□□□ -1.15
USP39-214ENST00000474572 METTL1Q9UBP6 276 aaKnown RBP7.85□□□□□ -1.15
USP39-214ENST00000474572 YTHDF2Q9Y5A9 579 aaKnown RBP7.85□□□□□ -1.15
USP39-214ENST00000474572 ANKHD1Q8IWZ3 2542 aaKnown RBP7.84□□□□□ -1.15
USP39-214ENST00000474572 FOXH1O75593 365 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 PFN1P07737 140 aaKnown RBP7.84□□□□□ -1.15
USP39-214ENST00000474572 C8orf88P0DMB2 117 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 CD99P14209 185 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 CDKN1AP38936 164 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 CEACAM3P40198 252 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 PRB3Q04118 309 aaPredicted RBP7.84□□□□□ -1.15
USP39-214ENST00000474572 EBI3Q14213 229 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 ADIRFQ15847 76 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 TNXAQ16473 311 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 MINOS1Q5TGZ0 78 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 C16orf82Q7Z2V1 217 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 LINC01551Q86U37 167 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 ZFP82Q8N141 532 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 OR2T6Q8NHC8 308 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 SRSF12Q8WXF0 261 aaKnown RBP7.84□□□□□ -1.15
USP39-214ENST00000474572 TMEM37Q8WXS4 190 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 TRGV9Q99603 122 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 SSX3Q99909 188 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 SLC25A33Q9BSK2 321 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 SIRPDQ9H106 197 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 MRPL36Q9P0J6 103 aaKnown RBP7.84□□□□□ -1.15
USP39-214ENST00000474572 F11RQ9Y624 299 aaKnown RBP7.84□□□□□ -1.15
USP39-214ENST00000474572 MINOS1-NBL1R4GNA1 71 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 MALRD1Q5VYJ5 2156 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 ROS1P08922 2347 aa7.84□□□□□ -1.15
USP39-214ENST00000474572 MAP1BP46821 2468 aaKnown RBP7.84□□□□□ -1.16
USP39-214ENST00000474572 TGIF2-C20orf24A0A0A6YYL0 155 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 C9JCJ5 164 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 UBE2CO00762 179 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 TIMM23O14925 209 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 NDUFS7O75251 213 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 ACTL6BO94805 426 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 HOXB4P17483 251 aaPredicted RBP7.83□□□□□ -1.16
USP39-214ENST00000474572 GATA2P23769 480 aaPredicted RBP7.83□□□□□ -1.16
USP39-214ENST00000474572 TAS2R45P59539 299 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 UBE2G2P60604 165 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 KLRD1Q13241 179 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 ZNF674Q2M3X9 581 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 CST9LP1Q5W188 147 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 Q8N6K4 173 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 TMEM116Q8NCL8 245 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 OR51G1Q8NGK1 321 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 OR1L4Q8NGR5 311 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 C2CD4CQ8TF44 421 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 ACY3Q96HD9 319 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 FAM167A-AS1Q96KT0 104 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 PFDN5Q99471 154 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 FBXL15Q9H469 300 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 SAV1Q9H4B6 383 aaPredicted RBP7.83□□□□□ -1.16
USP39-214ENST00000474572 UBTD1Q9HAC8 227 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 LY96Q9Y6Y9 160 aa7.83□□□□□ -1.16
USP39-214ENST00000474572 TRBV20OR9-2A0A075B6H5 130 aa7.82□□□□□ -1.16
USP39-214ENST00000474572 IGHV2-70DA0A0C4DH43 119 aa7.82□□□□□ -1.16
USP39-214ENST00000474572 SCO2A0A1W2PP80 73 aa7.82□□□□□ -1.16
USP39-214ENST00000474572 A0A1W2PRE2 83 aa7.82□□□□□ -1.16
USP39-214ENST00000474572 PHOX2AO14813 284 aa7.82□□□□□ -1.16
USP39-214ENST00000474572 NBR2O15453 112 aa7.82□□□□□ -1.16
USP39-214ENST00000474572 NDUFB4O95168 129 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms