RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 MT-CO2P00403 227 aa8.36□□□□□ -1.07
EXOSC1-207ENST00000474309 RLN1P04808 185 aa8.36□□□□□ -1.07
EXOSC1-207ENST00000474309 GIG44P09565 113 aaPredicted RBP8.36□□□□□ -1.07
EXOSC1-207ENST00000474309 RBMY1A1P0DJD3 496 aaKnown RBP8.36□□□□□ -1.07
EXOSC1-207ENST00000474309 RBMY1CP0DJD4 496 aa8.36□□□□□ -1.07
EXOSC1-207ENST00000474309 HLA-DMBP28068 263 aa8.36□□□□□ -1.07
EXOSC1-207ENST00000474309 NPBWR1P48145 328 aa8.36□□□□□ -1.07
EXOSC1-207ENST00000474309 RBMY1FQ15415 496 aaKnown RBP8.36□□□□□ -1.07
EXOSC1-207ENST00000474309 PVRIGQ6DKI7 326 aa8.36□□□□□ -1.07
EXOSC1-207ENST00000474309 TOMM20LQ6UXN7 152 aa8.36□□□□□ -1.07
EXOSC1-207ENST00000474309 CENPSQ8N2Z9 138 aa8.36□□□□□ -1.07
EXOSC1-207ENST00000474309 LILRB2Q8N423 598 aa8.36□□□□□ -1.07
EXOSC1-207ENST00000474309 ST8SIA2Q92186 375 aa8.36□□□□□ -1.07
EXOSC1-207ENST00000474309 MISP3Q96FF7 219 aa8.36□□□□□ -1.07
EXOSC1-207ENST00000474309 CNBD2Q96M20 576 aa8.36□□□□□ -1.07
EXOSC1-207ENST00000474309 ZNF2Q9BSG1 426 aaPredicted RBP8.36□□□□□ -1.07
EXOSC1-207ENST00000474309 TMEM231Q9H6L2 316 aa8.36□□□□□ -1.07
EXOSC1-207ENST00000474309 EHFQ9NZC4 300 aa8.36□□□□□ -1.07
EXOSC1-207ENST00000474309 IGHV4-4A0A075B6R2 117 aa8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 IGHV4-28A0A0C4DH34 117 aa8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 A0A1W2PS18 150 aa8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 DBX1A6NMT0 343 aa8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 XRCC3O43542 346 aa8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 SPP1P10451 314 aa8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 NAT1P18440 290 aa8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 PSMB9P28065 219 aa8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 RFX2P48378 723 aa8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 HSPE1P61604 102 aaKnown RBP8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 ERHP84090 104 aaKnown RBP8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 PRCDQ00LT1 54 aa8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 IDNKQ5T6J7 187 aa8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 LEMD1Q68G75 181 aa8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 LPCAT3Q6P1A2 487 aa8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 ZNF600Q6ZNG1 722 aa8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 SPARTQ8N0X7 666 aa8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 GRAMD2BQ96HH9 432 aa8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 SEC22AQ96IW7 307 aa8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 IFT46Q9NQC8 304 aa8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 ANAPC10Q9UM13 185 aa8.35□□□□□ -1.07
EXOSC1-207ENST00000474309 TMEM50AO95807 157 aa8.34□□□□□ -1.07
EXOSC1-207ENST00000474309 APOHP02749 345 aaPredicted RBP8.34□□□□□ -1.07
EXOSC1-207ENST00000474309 FCER2P06734 321 aa8.34□□□□□ -1.07
EXOSC1-207ENST00000474309 CLEC2LP0C7M8 214 aa8.34□□□□□ -1.07
EXOSC1-207ENST00000474309 NPPCP23582 126 aa8.34□□□□□ -1.07
EXOSC1-207ENST00000474309 S100GP29377 79 aa8.34□□□□□ -1.07
EXOSC1-207ENST00000474309 MXD1Q05195 221 aa8.34□□□□□ -1.07
EXOSC1-207ENST00000474309 H2BFWTQ7Z2G1 175 aa8.34□□□□□ -1.07
EXOSC1-207ENST00000474309 TRPT1Q86TN4 253 aaKnown RBP8.34□□□□□ -1.07
EXOSC1-207ENST00000474309 POM121L12Q8N7R1 296 aa8.34□□□□□ -1.07
EXOSC1-207ENST00000474309 OR6F1Q8NGZ6 308 aa8.34□□□□□ -1.07
EXOSC1-207ENST00000474309 OR4A16Q8NH70 328 aa8.34□□□□□ -1.07
EXOSC1-207ENST00000474309 S100A16Q96FQ6 103 aaKnown RBP8.34□□□□□ -1.07
EXOSC1-207ENST00000474309 YTHDF1Q9BYJ9 559 aaKnown RBP8.34□□□□□ -1.07
EXOSC1-207ENST00000474309 RAB26Q9ULW5 256 aa8.34□□□□□ -1.07
EXOSC1-207ENST00000474309 FAT2Q9NYQ8 4349 aa8.34□□□□□ -1.07
EXOSC1-207ENST00000474309 PKHD1P08F94 4074 aa8.33□□□□□ -1.08
EXOSC1-207ENST00000474309 INS-IGF2F8WCM5 200 aa8.33□□□□□ -1.08
EXOSC1-207ENST00000474309 K7EQG2 157 aa8.33□□□□□ -1.08
EXOSC1-207ENST00000474309 P0DMU3 169 aa8.33□□□□□ -1.08
EXOSC1-207ENST00000474309 FAM231AP0DMU4 169 aa8.33□□□□□ -1.08
EXOSC1-207ENST00000474309 FAM231CP0DMU5 169 aa8.33□□□□□ -1.08
EXOSC1-207ENST00000474309 TAS2R46P59540 309 aa8.33□□□□□ -1.08
EXOSC1-207ENST00000474309 RPL11P62913 178 aaKnown RBP8.33□□□□□ -1.08
EXOSC1-207ENST00000474309 Q6ZTC4 211 aa8.33□□□□□ -1.08
EXOSC1-207ENST00000474309 FAM24BQ8N5W8 94 aa8.33□□□□□ -1.08
EXOSC1-207ENST00000474309 OR5H2Q8NGV7 314 aa8.33□□□□□ -1.08
EXOSC1-207ENST00000474309 PINX1Q96BK5 328 aaKnown RBP8.33□□□□□ -1.08
EXOSC1-207ENST00000474309 ZFAND3Q9H8U3 227 aa8.33□□□□□ -1.08
EXOSC1-207ENST00000474309 PUS1Q9Y606 427 aaKnown RBP eCLIP8.33□□□□□ -1.08
EXOSC1-207ENST00000474309 X6R8D5 127 aa8.33□□□□□ -1.08
EXOSC1-207ENST00000474309 DNAH2Q9P225 4427 aa8.33□□□□□ -1.08
EXOSC1-207ENST00000474309 ELOA3CA0A087WX78 387 aaPredicted RBP8.32□□□□□ -1.08
EXOSC1-207ENST00000474309 MEIS3P1A6NDR6 274 aa8.32□□□□□ -1.08
EXOSC1-207ENST00000474309 IGHV3-48P01763 117 aa8.32□□□□□ -1.08
EXOSC1-207ENST00000474309 PMP2P02689 132 aa8.32□□□□□ -1.08
EXOSC1-207ENST00000474309 CRYBB3P26998 211 aa8.32□□□□□ -1.08
EXOSC1-207ENST00000474309 LGALS9BQ3B8N2 356 aa8.32□□□□□ -1.08
EXOSC1-207ENST00000474309 KCTD21Q4G0X4 260 aa8.32□□□□□ -1.08
EXOSC1-207ENST00000474309 IZUMO2Q6UXV1 221 aa8.32□□□□□ -1.08
EXOSC1-207ENST00000474309 LYSMD2Q8IV50 215 aa8.32□□□□□ -1.08
EXOSC1-207ENST00000474309 CSNK1G2-AS1Q8NCQ2 148 aa8.32□□□□□ -1.08
EXOSC1-207ENST00000474309 RABAC1Q9UI14 185 aa8.32□□□□□ -1.08
EXOSC1-207ENST00000474309 TBC1D24Q9ULP9 559 aa8.32□□□□□ -1.08
EXOSC1-207ENST00000474309 DEFB131BA0A096LNP1 70 aa8.31□□□□□ -1.08
EXOSC1-207ENST00000474309 A0A1B0GU03 582 aa8.31□□□□□ -1.08
EXOSC1-207ENST00000474309 PRSS29PA6NIE9 313 aa8.31□□□□□ -1.08
EXOSC1-207ENST00000474309 ANKRD65E5RJM6 399 aa8.31□□□□□ -1.08
EXOSC1-207ENST00000474309 CORTO00230 105 aa8.31□□□□□ -1.08
EXOSC1-207ENST00000474309 IGKV1-39P01597 117 aa8.31□□□□□ -1.08
EXOSC1-207ENST00000474309 AMBPP02760 352 aa8.31□□□□□ -1.08
EXOSC1-207ENST00000474309 IGKV1D-39P04432 117 aa8.31□□□□□ -1.08
EXOSC1-207ENST00000474309 NPY1RP25929 384 aa8.31□□□□□ -1.08
EXOSC1-207ENST00000474309 SNCAP37840 140 aa8.31□□□□□ -1.08
EXOSC1-207ENST00000474309 SUB1P53999 127 aaKnown RBP eCLIP8.31□□□□□ -1.08
EXOSC1-207ENST00000474309 UCP3P55916 312 aa8.31□□□□□ -1.08
EXOSC1-207ENST00000474309 CROCCP3Q8IVE0 287 aa8.31□□□□□ -1.08
EXOSC1-207ENST00000474309 METTL26Q96S19 204 aa8.31□□□□□ -1.08
EXOSC1-207ENST00000474309 FXYD6Q9H0Q3 95 aa8.31□□□□□ -1.08
EXOSC1-207ENST00000474309 RNF167Q9H6Y7 350 aa8.31□□□□□ -1.08
EXOSC1-207ENST00000474309 DNAH11Q96DT5 4516 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms