RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 SPINK14Q6IE38 97 aa15.24■□□□□ 0.03
ECHDC1-214ENST00000474289 PPP1R32Q7Z5V6 425 aa15.24■□□□□ 0.03
ECHDC1-214ENST00000474289 LOXL2Q9Y4K0 774 aa15.24■□□□□ 0.03
ECHDC1-214ENST00000474289 HIGD1CA8MV81 97 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 VWC2LB2RUY7 222 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 CORTO00230 105 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 CD5LO43866 347 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 IGHV3-13P01766 116 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 IGHV3-7P01780 117 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 ADH4P08319 380 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 CYB561P49447 251 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 LYSMD4Q5XG99 296 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 ACP7Q6ZNF0 438 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 FAM231DQ6ZW35 169 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 SMIM12Q96EX1 92 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 GRAMD2BQ96HH9 432 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 TNCP24821 2201 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 IGHV1-24A0A0C4DH33 117 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 TAS2R45P59539 299 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 TBC1D28Q2M2D7 210 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 C11orf53Q8IXP5 236 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 ZC2HC1AQ96GY0 325 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 S1PR3Q99500 378 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 SPOCK3Q9BQ16 436 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 C12orf49Q9H741 205 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 SCRT2Q9NQ03 307 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 GNG12Q9UBI6 72 aa15.23■□□□□ 0.03
ECHDC1-214ENST00000474289 SAP30O75446 220 aa15.22■□□□□ 0.03
ECHDC1-214ENST00000474289 MYOD1P15172 320 aa15.22■□□□□ 0.03
ECHDC1-214ENST00000474289 CXCL12P48061 93 aa15.22■□□□□ 0.03
ECHDC1-214ENST00000474289 ZNF841Q6ZN19 808 aa15.22■□□□□ 0.03
ECHDC1-214ENST00000474289 SARAFQ96BY9 339 aa15.22■□□□□ 0.03
ECHDC1-214ENST00000474289 A0A087X0K7 114 aa15.22■□□□□ 0.03
ECHDC1-214ENST00000474289 TNFSF15O95150 251 aa15.22■□□□□ 0.03
ECHDC1-214ENST00000474289 REG1BP48304 166 aa15.22■□□□□ 0.03
ECHDC1-214ENST00000474289 GABRA6Q16445 453 aa15.22■□□□□ 0.03
ECHDC1-214ENST00000474289 RTL8BQ17RB0 113 aa15.22■□□□□ 0.03
ECHDC1-214ENST00000474289 TRAT1Q6PIZ9 186 aa15.22■□□□□ 0.03
ECHDC1-214ENST00000474289 SLC25A40Q8TBP6 338 aa15.22■□□□□ 0.03
ECHDC1-214ENST00000474289 BOKQ9UMX3 212 aaPredicted RBP15.22■□□□□ 0.03
ECHDC1-214ENST00000474289 ZNF835Q9Y2P0 537 aa15.22■□□□□ 0.03
ECHDC1-214ENST00000474289 RIPPLY3P57055 190 aa15.21■□□□□ 0.03
ECHDC1-214ENST00000474289 HSPE1P61604 102 aaKnown RBP15.21■□□□□ 0.03
ECHDC1-214ENST00000474289 EDDM3AQ14507 147 aa15.21■□□□□ 0.03
ECHDC1-214ENST00000474289 PRR7Q8TB68 274 aa15.21■□□□□ 0.03
ECHDC1-214ENST00000474289 HINT2Q9BX68 163 aa15.21■□□□□ 0.03
ECHDC1-214ENST00000474289 ENY2Q9NPA8 101 aa15.21■□□□□ 0.03
ECHDC1-214ENST00000474289 OBP2BQ9NPH6 170 aa15.21■□□□□ 0.03
ECHDC1-214ENST00000474289 TMEM14BQ9NUH8 114 aa15.21■□□□□ 0.03
ECHDC1-214ENST00000474289 A0A1B0GXF2 115 aa15.21■□□□□ 0.02
ECHDC1-214ENST00000474289 HSBP1L1C9JCN9 74 aa15.21■□□□□ 0.02
ECHDC1-214ENST00000474289 FNDC10F2Z333 226 aa15.21■□□□□ 0.02
ECHDC1-214ENST00000474289 LEPROTL1O95214 131 aa15.21■□□□□ 0.02
ECHDC1-214ENST00000474289 HLA-DRB1P01911 266 aa15.21■□□□□ 0.02
ECHDC1-214ENST00000474289 FOXA3P55318 350 aaPredicted RBP15.21■□□□□ 0.02
ECHDC1-214ENST00000474289 SLC25A33Q9BSK2 321 aa15.21■□□□□ 0.02
ECHDC1-214ENST00000474289 PEF1Q9UBV8 284 aaKnown RBP15.21■□□□□ 0.02
ECHDC1-214ENST00000474289 PCSK5Q92824 1860 aa15.2■□□□□ 0.02
ECHDC1-214ENST00000474289 IQCF6A8MYZ5 107 aa15.2■□□□□ 0.02
ECHDC1-214ENST00000474289 IGLC1P0CG04 106 aa15.2■□□□□ 0.02
ECHDC1-214ENST00000474289 C8orf88P0DMB2 117 aa15.2■□□□□ 0.02
ECHDC1-214ENST00000474289 CD24P25063 80 aa15.2■□□□□ 0.02
ECHDC1-214ENST00000474289 ZNF134P52741 427 aa15.2■□□□□ 0.02
ECHDC1-214ENST00000474289 C3AR1Q16581 482 aa15.2■□□□□ 0.02
ECHDC1-214ENST00000474289 FAM90A1Q86YD7 464 aa15.2■□□□□ 0.02
ECHDC1-214ENST00000474289 TMEM191AQ9H0A3 160 aa15.2■□□□□ 0.02
ECHDC1-214ENST00000474289 FOXA2Q9Y261 457 aaPredicted RBP15.2■□□□□ 0.02
ECHDC1-214ENST00000474289 TMEM11P17152 192 aa15.19■□□□□ 0.02
ECHDC1-214ENST00000474289 HIST1H1AQ02539 215 aaPredicted RBP15.19■□□□□ 0.02
ECHDC1-214ENST00000474289 MORN5Q5VZ52 161 aa15.19■□□□□ 0.02
ECHDC1-214ENST00000474289 C1orf229Q6ZS94 237 aaPredicted RBP15.19■□□□□ 0.02
ECHDC1-214ENST00000474289 NANOS1Q8WY41 292 aaKnown RBP15.19■□□□□ 0.02
ECHDC1-214ENST00000474289 HES7Q9BYE0 225 aa15.19■□□□□ 0.02
ECHDC1-214ENST00000474289 AMMECR1Q9Y4X0 333 aaPredicted RBP15.19■□□□□ 0.02
ECHDC1-214ENST00000474289 UBE2L3P68036 154 aaKnown RBP15.19■□□□□ 0.02
ECHDC1-214ENST00000474289 SSX8Q7RTT4 187 aa15.19■□□□□ 0.02
ECHDC1-214ENST00000474289 ATP5L2Q7Z4Y8 100 aa15.19■□□□□ 0.02
ECHDC1-214ENST00000474289 IFI27L2Q9H2X8 130 aa15.19■□□□□ 0.02
ECHDC1-214ENST00000474289 IDI2-AS1Q9NZ38 188 aa15.19■□□□□ 0.02
ECHDC1-214ENST00000474289 TRAV5A0A0B4J249 113 aa15.18■□□□□ 0.02
ECHDC1-214ENST00000474289 CER1O95813 267 aa15.18■□□□□ 0.02
ECHDC1-214ENST00000474289 VWA1Q6PCB0 445 aa15.18■□□□□ 0.02
ECHDC1-214ENST00000474289 DDB2Q92466 427 aa15.18■□□□□ 0.02
ECHDC1-214ENST00000474289 FAM167A-AS1Q96KT0 104 aa15.18■□□□□ 0.02
ECHDC1-214ENST00000474289 MCRIP2Q9BUT9 160 aaKnown RBP15.18■□□□□ 0.02
ECHDC1-214ENST00000474289 CHTOPQ9Y3Y2 248 aaKnown RBP15.18■□□□□ 0.02
ECHDC1-214ENST00000474289 J3QW42 95 aa15.18■□□□□ 0.02
ECHDC1-214ENST00000474289 MPV17P39210 176 aa15.18■□□□□ 0.02
ECHDC1-214ENST00000474289 FAM162BQ5T6X4 162 aa15.18■□□□□ 0.02
ECHDC1-214ENST00000474289 WDR82Q6UXN9 313 aa15.18■□□□□ 0.02
ECHDC1-214ENST00000474289 OR4S2Q8NH73 311 aa15.18■□□□□ 0.02
ECHDC1-214ENST00000474289 TMEM265A0A087WTH1 108 aa15.17■□□□□ 0.02
ECHDC1-214ENST00000474289 CHCHD1Q96BP2 118 aaKnown RBP15.17■□□□□ 0.02
ECHDC1-214ENST00000474289 C19orf24Q9BVV8 132 aa15.17■□□□□ 0.02
ECHDC1-214ENST00000474289 SLC25A2Q9BXI2 301 aa15.17■□□□□ 0.02
ECHDC1-214ENST00000474289 JPT1Q9UK76 154 aa15.17■□□□□ 0.02
ECHDC1-214ENST00000474289 RPH3ALQ9UNE2 315 aa15.17■□□□□ 0.02
ECHDC1-214ENST00000474289 C7orf71A4D174 169 aa15.17■□□□□ 0.02
ECHDC1-214ENST00000474289 CFIP05156 583 aa15.17■□□□□ 0.02
ECHDC1-214ENST00000474289 MAGEA5P43359 124 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms