RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 NDUFA4O00483 81 aa16.96■□□□□ 0.31
PTP4A1-203ENST00000473334 ST8SIA3O43173 380 aa16.96■□□□□ 0.31
PTP4A1-203ENST00000473334 IFNA17P01571 189 aa16.96■□□□□ 0.31
PTP4A1-203ENST00000473334 ADMP35318 185 aa16.96■□□□□ 0.31
PTP4A1-203ENST00000473334 A0A0G2JRQ6 117 aa16.95■□□□□ 0.3
PTP4A1-203ENST00000473334 INS-IGF2F8WCM5 200 aa16.95■□□□□ 0.3
PTP4A1-203ENST00000473334 CDS2O95674 445 aa16.95■□□□□ 0.3
PTP4A1-203ENST00000473334 FCGR2BP31994 310 aaPredicted RBP16.95■□□□□ 0.3
PTP4A1-203ENST00000473334 MFAP4P55083 255 aa16.95■□□□□ 0.3
PTP4A1-203ENST00000473334 FAM219AQ8IW50 185 aa16.95■□□□□ 0.3
PTP4A1-203ENST00000473334 GLYATL2Q8WU03 294 aa16.95■□□□□ 0.3
PTP4A1-203ENST00000473334 TXN2Q99757 166 aa16.95■□□□□ 0.3
PTP4A1-203ENST00000473334 DAZ1Q9NQZ3 744 aaKnown RBP16.95■□□□□ 0.3
PTP4A1-203ENST00000473334 SCP2D1Q9UJQ7 156 aa16.95■□□□□ 0.3
PTP4A1-203ENST00000473334 TRAV25A0A0B4J276 109 aa16.94■□□□□ 0.3
PTP4A1-203ENST00000473334 CRYM-AS1A6NIL9 109 aa16.94■□□□□ 0.3
PTP4A1-203ENST00000473334 MT-CO2P00403 227 aa16.94■□□□□ 0.3
PTP4A1-203ENST00000473334 SNCAP37840 140 aa16.94■□□□□ 0.3
PTP4A1-203ENST00000473334 DHODHQ02127 395 aa16.94■□□□□ 0.3
PTP4A1-203ENST00000473334 HAGHQ16775 308 aa16.94■□□□□ 0.3
PTP4A1-203ENST00000473334 RBPMSQ93062 196 aaKnown RBP16.94■□□□□ 0.3
PTP4A1-203ENST00000473334 OR11H12B2RN74 326 aa16.93■□□□□ 0.3
PTP4A1-203ENST00000473334 NUPL2O15504 423 aaKnown RBP16.93■□□□□ 0.3
PTP4A1-203ENST00000473334 SCAF4O95104 1147 aaKnown RBP16.93■□□□□ 0.3
PTP4A1-203ENST00000473334 CTSGP08311 255 aa16.93■□□□□ 0.3
PTP4A1-203ENST00000473334 HOXA1P49639 335 aaPredicted RBP16.93■□□□□ 0.3
PTP4A1-203ENST00000473334 SLC16A13Q7RTY0 426 aa16.93■□□□□ 0.3
PTP4A1-203ENST00000473334 DEFB125Q8N687 156 aa16.93■□□□□ 0.3
PTP4A1-203ENST00000473334 LHFPL5Q8TAF8 219 aa16.93■□□□□ 0.3
PTP4A1-203ENST00000473334 PINX1Q96BK5 328 aaKnown RBP16.93■□□□□ 0.3
PTP4A1-203ENST00000473334 SPATA25Q9BR10 227 aa16.93■□□□□ 0.3
PTP4A1-203ENST00000473334 C20orf24Q9BUV8 137 aa16.93■□□□□ 0.3
PTP4A1-203ENST00000473334 WFDC10AQ9H1F0 79 aa16.93■□□□□ 0.3
PTP4A1-203ENST00000473334 MCUBQ9NWR8 336 aa16.93■□□□□ 0.3
PTP4A1-203ENST00000473334 RELQ04864 619 aaPredicted RBP16.92■□□□□ 0.3
PTP4A1-203ENST00000473334 ANKRD55Q3KP44 614 aa16.92■□□□□ 0.3
PTP4A1-203ENST00000473334 LINC00322Q6ZN03 302 aaPredicted RBP16.92■□□□□ 0.3
PTP4A1-203ENST00000473334 RBPMS2Q6ZRY4 209 aaKnown RBP16.92■□□□□ 0.3
PTP4A1-203ENST00000473334 OR52B4Q8NGK2 314 aa16.92■□□□□ 0.3
PTP4A1-203ENST00000473334 SCGB3A2Q96PL1 93 aa16.92■□□□□ 0.3
PTP4A1-203ENST00000473334 RBM38Q9H0Z9 239 aaKnown RBP16.92■□□□□ 0.3
PTP4A1-203ENST00000473334 SRD5A3Q9H8P0 318 aa16.92■□□□□ 0.3
PTP4A1-203ENST00000473334 DNAH7Q8WXX0 4024 aa16.92■□□□□ 0.3
PTP4A1-203ENST00000473334 KMT2CQ8NEZ4 4911 aaKnown RBP16.92■□□□□ 0.3
PTP4A1-203ENST00000473334 K7EMT4 169 aa16.91■□□□□ 0.3
PTP4A1-203ENST00000473334 ETV6P41212 452 aa16.91■□□□□ 0.3
PTP4A1-203ENST00000473334 TMEM268Q5VZI3 342 aa16.91■□□□□ 0.3
PTP4A1-203ENST00000473334 Q6ZRM9 215 aa16.91■□□□□ 0.3
PTP4A1-203ENST00000473334 SELENOHQ8IZQ5 122 aaKnown RBP16.91■□□□□ 0.3
PTP4A1-203ENST00000473334 ENY2Q9NPA8 101 aa16.91■□□□□ 0.3
PTP4A1-203ENST00000473334 IGHV3OR16-8A0A075B7F1 116 aa16.9■□□□□ 0.3
PTP4A1-203ENST00000473334 C15orf62A8K5M9 175 aa16.9■□□□□ 0.3
PTP4A1-203ENST00000473334 GNG7O60262 68 aa16.9■□□□□ 0.3
PTP4A1-203ENST00000473334 IGHV3-48P01763 117 aa16.9■□□□□ 0.3
PTP4A1-203ENST00000473334 S100A5P33763 92 aa16.9■□□□□ 0.3
PTP4A1-203ENST00000473334 SUB1P53999 127 aaKnown RBP eCLIP16.9■□□□□ 0.3
PTP4A1-203ENST00000473334 AARDQ4LEZ3 155 aa16.9■□□□□ 0.3
PTP4A1-203ENST00000473334 PYDC2Q56P42 97 aa16.9■□□□□ 0.3
PTP4A1-203ENST00000473334 TMEM230Q96A57 120 aa16.9■□□□□ 0.3
PTP4A1-203ENST00000473334 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.9■□□□□ 0.3
PTP4A1-203ENST00000473334 V9GYH0 126 aa16.9■□□□□ 0.3
PTP4A1-203ENST00000473334 C3orf84H3BNL1 204 aa16.89■□□□□ 0.29
PTP4A1-203ENST00000473334 CORTO00230 105 aa16.89■□□□□ 0.29
PTP4A1-203ENST00000473334 RNASE2P10153 161 aaKnown RBP16.89■□□□□ 0.29
PTP4A1-203ENST00000473334 FAUP35544 74 aaKnown RBP16.89■□□□□ 0.29
PTP4A1-203ENST00000473334 SPCS3P61009 180 aa16.89■□□□□ 0.29
PTP4A1-203ENST00000473334 PVRIGQ6DKI7 326 aa16.89■□□□□ 0.29
PTP4A1-203ENST00000473334 OR52E5Q8NH55 327 aa16.89■□□□□ 0.29
PTP4A1-203ENST00000473334 TRIM63Q969Q1 353 aa16.89■□□□□ 0.29
PTP4A1-203ENST00000473334 GALNT14Q96FL9 552 aa16.89■□□□□ 0.29
PTP4A1-203ENST00000473334 ZNF414Q96IQ9 312 aa16.89■□□□□ 0.29
PTP4A1-203ENST00000473334 CITED4Q96RK1 184 aa16.89■□□□□ 0.29
PTP4A1-203ENST00000473334 CACNG5Q9UF02 275 aa16.89■□□□□ 0.29
PTP4A1-203ENST00000473334 KCNIP3Q9Y2W7 256 aa16.89■□□□□ 0.29
PTP4A1-203ENST00000473334 TMEM56-RWDD3S4R434 201 aa16.89■□□□□ 0.29
PTP4A1-203ENST00000473334 ZNF701M0R085 212 aaPredicted RBP16.88■□□□□ 0.29
PTP4A1-203ENST00000473334 ZNF207O43670 478 aaKnown RBP16.88■□□□□ 0.29
PTP4A1-203ENST00000473334 NPBWR1P48145 328 aa16.88■□□□□ 0.29
PTP4A1-203ENST00000473334 AP3S2P59780 193 aa16.88■□□□□ 0.29
PTP4A1-203ENST00000473334 KLF9Q13886 244 aaPredicted RBP16.88■□□□□ 0.29
PTP4A1-203ENST00000473334 DUSP18Q8NEJ0 188 aa16.88■□□□□ 0.29
PTP4A1-203ENST00000473334 MUC7Q8TAX7 377 aa16.88■□□□□ 0.29
PTP4A1-203ENST00000473334 IL22RA2Q969J5 263 aa16.88■□□□□ 0.29
PTP4A1-203ENST00000473334 GPR146Q96CH1 333 aa16.88■□□□□ 0.29
PTP4A1-203ENST00000473334 SPAG8Q99932 426 aaPredicted RBP16.88■□□□□ 0.29
PTP4A1-203ENST00000473334 RBMY1BA6NDE4 496 aaKnown RBP16.87■□□□□ 0.29
PTP4A1-203ENST00000473334 RBMY1EA6NEQ0 496 aaKnown RBP16.87■□□□□ 0.29
PTP4A1-203ENST00000473334 TSPAN4O14817 238 aa16.87■□□□□ 0.29
PTP4A1-203ENST00000473334 YIF1AO95070 293 aa16.87■□□□□ 0.29
PTP4A1-203ENST00000473334 RBMY1DP0C7P1 496 aaKnown RBP16.87■□□□□ 0.29
PTP4A1-203ENST00000473334 TMEM187Q14656 261 aa16.87■□□□□ 0.29
PTP4A1-203ENST00000473334 LAMTOR1Q6IAA8 161 aa16.87■□□□□ 0.29
PTP4A1-203ENST00000473334 TOMM5Q8N4H5 51 aa16.87■□□□□ 0.29
PTP4A1-203ENST00000473334 OR10C1Q96KK4 312 aa16.87■□□□□ 0.29
PTP4A1-203ENST00000473334 ZNF79Q15937 498 aa16.86■□□□□ 0.29
PTP4A1-203ENST00000473334 BSXQ3C1V8 233 aa16.86■□□□□ 0.29
PTP4A1-203ENST00000473334 CCDC190Q86UF4 302 aa16.86■□□□□ 0.29
PTP4A1-203ENST00000473334 SMPXQ9UHP9 88 aa16.86■□□□□ 0.29
PTP4A1-203ENST00000473334 AKR1C4P17516 323 aa16.85■□□□□ 0.29
PTP4A1-203ENST00000473334 HIPK2Q9H2X6 1198 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms