RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 GTF2H5Q6ZYL4 71 aa8.35□□□□□ -1.07
APTX-216ENST00000472896 KRTAP1-3Q8IUG1 177 aa8.35□□□□□ -1.07
APTX-216ENST00000472896 SLC25A40Q8TBP6 338 aa8.35□□□□□ -1.07
APTX-216ENST00000472896 WIPF2Q8TF74 440 aaPredicted RBP8.35□□□□□ -1.07
APTX-216ENST00000472896 SPSB4Q96A44 273 aa8.35□□□□□ -1.07
APTX-216ENST00000472896 PMCHL2Q9BQD1 86 aa8.35□□□□□ -1.07
APTX-216ENST00000472896 DEFB127Q9H1M4 99 aa8.35□□□□□ -1.07
APTX-216ENST00000472896 C19orf25Q9UFG5 118 aaPredicted RBP8.35□□□□□ -1.07
APTX-216ENST00000472896 ARID1AO14497 2285 aa8.35□□□□□ -1.07
APTX-216ENST00000472896 A0A0G2JNJ9 132 aa8.34□□□□□ -1.07
APTX-216ENST00000472896 VSTM5A8MXK1 200 aa8.34□□□□□ -1.07
APTX-216ENST00000472896 NPIPA3F8WFD2 350 aa8.34□□□□□ -1.07
APTX-216ENST00000472896 OR7C2O60412 319 aa8.34□□□□□ -1.07
APTX-216ENST00000472896 HSBP1O75506 76 aa8.34□□□□□ -1.07
APTX-216ENST00000472896 LY6G6DO95868 133 aa8.34□□□□□ -1.07
APTX-216ENST00000472896 IGLV2-14P01704 120 aa8.34□□□□□ -1.07
APTX-216ENST00000472896 P0C879 139 aa8.34□□□□□ -1.07
APTX-216ENST00000472896 IGLC1P0CG04 106 aa8.34□□□□□ -1.07
APTX-216ENST00000472896 CEACAM3P40198 252 aa8.34□□□□□ -1.07
APTX-216ENST00000472896 CYB561P49447 251 aa8.34□□□□□ -1.07
APTX-216ENST00000472896 PSG3Q16557 428 aa8.34□□□□□ -1.07
APTX-216ENST00000472896 KIAA2026Q5HYC2 2103 aa8.34□□□□□ -1.07
APTX-216ENST00000472896 MRPL54Q6P161 138 aaKnown RBP8.34□□□□□ -1.07
APTX-216ENST00000472896 SLC25A34Q6PIV7 304 aa8.34□□□□□ -1.07
APTX-216ENST00000472896 SPATA3Q8NHX4 192 aa8.34□□□□□ -1.07
APTX-216ENST00000472896 MTCH1Q9NZJ7 389 aa8.34□□□□□ -1.07
APTX-216ENST00000472896 CRIM1Q9NZV1 1036 aa8.34□□□□□ -1.07
APTX-216ENST00000472896 Q9UFV3 132 aa8.34□□□□□ -1.07
APTX-216ENST00000472896 WASHC3Q9Y3C0 194 aa8.34□□□□□ -1.07
APTX-216ENST00000472896 IZUMO1RA6ND01 250 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 OR2T8A6NH00 312 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 TRAPPC2LH3BP13 241 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 ISLRO14498 428 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 RAB29O14966 203 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 CYC1P08574 325 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 NTF3P20783 257 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 PTGDSP41222 190 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 PSG9Q00887 426 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 DEFB113Q30KQ7 82 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 MPV17L2Q567V2 206 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 Q8N7P7 452 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 FER1L6-AS1Q8NA97 138 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 MS4A6AQ9H2W1 248 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 FBN1P35555 2871 aaKnown RBP8.33□□□□□ -1.08
APTX-216ENST00000472896 NSD1Q96L73 2696 aaPredicted RBP8.33□□□□□ -1.08
APTX-216ENST00000472896 HRNRQ86YZ3 2850 aaPredicted RBP8.33□□□□□ -1.08
APTX-216ENST00000472896 SMIM27A0A1W2PRY6 76 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 PINLYPA6NC86 204 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 M0R2Z0 102 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 CRXO43186 299 aaPredicted RBP8.33□□□□□ -1.08
APTX-216ENST00000472896 NUDT3O95989 172 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 ARL14EPLP0DKL9 152 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 SMIM17P0DL12 118 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 PRSS12P56730 875 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 PCBD1P61457 104 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 RPL31P62899 125 aaKnown RBP8.33□□□□□ -1.08
APTX-216ENST00000472896 HIST1H1AQ02539 215 aaPredicted RBP8.33□□□□□ -1.08
APTX-216ENST00000472896 ATOH7Q8N100 152 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 C18orf32Q8TCD1 76 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 TMEM70Q9BUB7 260 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 COMMD5Q9GZQ3 224 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 OR2D2Q9H210 308 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 METTL7AQ9H8H3 244 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 SAP30LQ9HAJ7 183 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 ZNF331Q9NQX6 463 aaPredicted RBP8.33□□□□□ -1.08
APTX-216ENST00000472896 DEPPQ9NTK1 212 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 KCNIP1Q9NZI2 227 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 PPP1R3CQ9UQK1 317 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 KLF13Q9Y2Y9 288 aaPredicted RBP8.33□□□□□ -1.08
APTX-216ENST00000472896 FAM215AQ9Y5M1 114 aa8.33□□□□□ -1.08
APTX-216ENST00000472896 TRAV38-1A0A0B4J264 116 aa8.32□□□□□ -1.08
APTX-216ENST00000472896 ODAMA1E959 279 aa8.32□□□□□ -1.08
APTX-216ENST00000472896 C2orf70A6NJV1 201 aa8.32□□□□□ -1.08
APTX-216ENST00000472896 KLRC4-KLRK1H3BQV0 150 aa8.32□□□□□ -1.08
APTX-216ENST00000472896 GOSR1O95249 250 aa8.32□□□□□ -1.08
APTX-216ENST00000472896 CRYBB3P26998 211 aa8.32□□□□□ -1.08
APTX-216ENST00000472896 GCHFRP30047 84 aa8.32□□□□□ -1.08
APTX-216ENST00000472896 S100A7P31151 101 aa8.32□□□□□ -1.08
APTX-216ENST00000472896 SEC11AP67812 179 aa8.32□□□□□ -1.08
APTX-216ENST00000472896 RELBQ01201 579 aa8.32□□□□□ -1.08
APTX-216ENST00000472896 Q56UQ5 140 aa8.32□□□□□ -1.08
APTX-216ENST00000472896 LCN12Q6JVE5 192 aa8.32□□□□□ -1.08
APTX-216ENST00000472896 EBLN2Q6P2I7 272 aa8.32□□□□□ -1.08
APTX-216ENST00000472896 PRSS57Q6UWY2 283 aa8.32□□□□□ -1.08
APTX-216ENST00000472896 CIARTQ8N365 385 aaPredicted RBP8.32□□□□□ -1.08
APTX-216ENST00000472896 FAM19A2Q8N3H0 131 aa8.32□□□□□ -1.08
APTX-216ENST00000472896 FADS6Q8N9I5 356 aa8.32□□□□□ -1.08
APTX-216ENST00000472896 NFAM1Q8NET5 270 aaPredicted RBP8.32□□□□□ -1.08
APTX-216ENST00000472896 KCNS2Q9ULS6 477 aa8.32□□□□□ -1.08
APTX-216ENST00000472896 GAGE10A6NGK3 116 aa8.31□□□□□ -1.08
APTX-216ENST00000472896 CGAP01215 116 aa8.31□□□□□ -1.08
APTX-216ENST00000472896 GNG4P50150 75 aa8.31□□□□□ -1.08
APTX-216ENST00000472896 KIAA1644Q3SXP7 199 aa8.31□□□□□ -1.08
APTX-216ENST00000472896 TIGITQ495A1 244 aa8.31□□□□□ -1.08
APTX-216ENST00000472896 UFSP1Q6NVU6 142 aa8.31□□□□□ -1.08
APTX-216ENST00000472896 WDR31Q8NA23 367 aa8.31□□□□□ -1.08
APTX-216ENST00000472896 SF3B5Q9BWJ5 86 aaKnown RBP8.31□□□□□ -1.08
APTX-216ENST00000472896 PRDM14Q9GZV8 571 aa8.31□□□□□ -1.08
APTX-216ENST00000472896 YTHDF2Q9Y5A9 579 aaKnown RBP8.31□□□□□ -1.08
APTX-216ENST00000472896 OR51B2Q9Y5P1 312 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms