RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 CDK10Q15131 360 aa1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 MIR17HGQ75NE6 70 aa1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 PFN4Q8NHR9 129 aa1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 C8orf76Q96K31 380 aa1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 REG4Q9BYZ8 158 aa1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 OR5AC2Q9NZP5 309 aa1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 MRPL27Q9P0M9 148 aaKnown RBP1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 GREB1Q4ZG55 1949 aa1.42□□□□□ -2.18
PRPF40A-208ENST00000472760 OR4C46A6NHA9 309 aa1.41□□□□□ -2.18
PRPF40A-208ENST00000472760 GOLGA6L19H0YKK7 550 aa1.41□□□□□ -2.18
PRPF40A-208ENST00000472760 RPP14O95059 124 aaKnown RBP1.41□□□□□ -2.18
PRPF40A-208ENST00000472760 SHBGP04278 402 aa1.41□□□□□ -2.18
PRPF40A-208ENST00000472760 DEFA1P59665 94 aa1.41□□□□□ -2.18
PRPF40A-208ENST00000472760 ZNF846Q147U1 533 aa1.41□□□□□ -2.18
PRPF40A-208ENST00000472760 DPPA3Q6W0C5 159 aa1.41□□□□□ -2.18
PRPF40A-208ENST00000472760 C12orf29Q8N999 325 aa1.41□□□□□ -2.18
PRPF40A-208ENST00000472760 H1FXQ92522 213 aaKnown RBP1.41□□□□□ -2.18
PRPF40A-208ENST00000472760 PPP1R14BQ96C90 147 aa1.41□□□□□ -2.18
PRPF40A-208ENST00000472760 TSPAN32Q96QS1 320 aa1.41□□□□□ -2.18
PRPF40A-208ENST00000472760 SLC39A9Q9NUM3 307 aa1.41□□□□□ -2.18
PRPF40A-208ENST00000472760 NUP155O75694 1391 aa1.41□□□□□ -2.18
PRPF40A-208ENST00000472760 KHDC3LQ587J8 217 aa1.4□□□□□ -2.19
PRPF40A-208ENST00000472760 DEFB128Q7Z7B8 93 aa1.4□□□□□ -2.19
PRPF40A-208ENST00000472760 OR4D11Q8NGI4 311 aa1.4□□□□□ -2.19
PRPF40A-208ENST00000472760 TERB2Q8NHR7 220 aa1.4□□□□□ -2.19
PRPF40A-208ENST00000472760 TMEM147Q9BVK8 224 aa1.4□□□□□ -2.19
PRPF40A-208ENST00000472760 UBAP1Q9NZ09 502 aa1.4□□□□□ -2.19
PRPF40A-208ENST00000472760 CCDC88CQ9P219 2028 aa1.4□□□□□ -2.19
PRPF40A-208ENST00000472760 TOPBP1Q92547 1522 aa1.4□□□□□ -2.19
PRPF40A-208ENST00000472760 LAMB2P55268 1798 aa1.39□□□□□ -2.19
PRPF40A-208ENST00000472760 IGKV1D-42A0A075B6H8 117 aa1.39□□□□□ -2.19
PRPF40A-208ENST00000472760 TRAV26-2A0A0B4J265 109 aa1.39□□□□□ -2.19
PRPF40A-208ENST00000472760 A0A0D9SG52 128 aa1.39□□□□□ -2.19
PRPF40A-208ENST00000472760 KPNA3O00505 521 aaPredicted RBP1.39□□□□□ -2.19
PRPF40A-208ENST00000472760 PIRO00625 290 aa1.39□□□□□ -2.19
PRPF40A-208ENST00000472760 CRYGAP11844 174 aa1.39□□□□□ -2.19
PRPF40A-208ENST00000472760 FKBP2P26885 142 aaKnown RBP1.39□□□□□ -2.19
PRPF40A-208ENST00000472760 AESQ08117 197 aa1.39□□□□□ -2.19
PRPF40A-208ENST00000472760 Q6ZQT0 140 aa1.39□□□□□ -2.19
PRPF40A-208ENST00000472760 ZNF826PQ6ZT77 177 aa1.39□□□□□ -2.19
PRPF40A-208ENST00000472760 ZNF565Q8N9K5 539 aa1.39□□□□□ -2.19
PRPF40A-208ENST00000472760 OR4E2Q8NGC2 313 aa1.39□□□□□ -2.19
PRPF40A-208ENST00000472760 AQP3Q92482 292 aa1.39□□□□□ -2.19
PRPF40A-208ENST00000472760 CMSS1Q9BQ75 279 aaKnown RBP1.39□□□□□ -2.19
PRPF40A-208ENST00000472760 SNURFQ9Y675 71 aa1.39□□□□□ -2.19
PRPF40A-208ENST00000472760 RALGAPA2Q2PPJ7 1873 aa1.39□□□□□ -2.19
PRPF40A-208ENST00000472760 PRRC2BQ5JSZ5 2229 aaKnown RBP1.39□□□□□ -2.19
PRPF40A-208ENST00000472760 SDK1Q7Z5N4 2213 aa1.39□□□□□ -2.19
PRPF40A-208ENST00000472760 HCRTO43612 131 aa1.38□□□□□ -2.19
PRPF40A-208ENST00000472760 TTRP02766 147 aa1.38□□□□□ -2.19
PRPF40A-208ENST00000472760 SPI1P17947 270 aa1.38□□□□□ -2.19
PRPF40A-208ENST00000472760 KRTAP10-4P60372 401 aaPredicted RBP1.38□□□□□ -2.19
PRPF40A-208ENST00000472760 PLCXD2Q0VAA5 305 aa1.38□□□□□ -2.19
PRPF40A-208ENST00000472760 RGS21Q2M5E4 152 aa1.38□□□□□ -2.19
PRPF40A-208ENST00000472760 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.38□□□□□ -2.19
PRPF40A-208ENST00000472760 KRT222Q8N1A0 295 aa1.38□□□□□ -2.19
PRPF40A-208ENST00000472760 OR5A1Q8NGJ0 315 aa1.38□□□□□ -2.19
PRPF40A-208ENST00000472760 SLC50A1Q9BRV3 221 aa1.38□□□□□ -2.19
PRPF40A-208ENST00000472760 CCDC90BQ9GZT6 254 aa1.38□□□□□ -2.19
PRPF40A-208ENST00000472760 TRABDQ9H4I3 376 aa1.38□□□□□ -2.19
PRPF40A-208ENST00000472760 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.38□□□□□ -2.19
PRPF40A-208ENST00000472760 ERGIC3Q9Y282 383 aa1.38□□□□□ -2.19
PRPF40A-208ENST00000472760 V9GYY5 206 aaPredicted RBP1.38□□□□□ -2.19
PRPF40A-208ENST00000472760 MAST2Q6P0Q8 1798 aa1.38□□□□□ -2.19
PRPF40A-208ENST00000472760 RIC1Q4ADV7 1423 aa1.38□□□□□ -2.19
PRPF40A-208ENST00000472760 RTTNQ86VV8 2226 aa1.38□□□□□ -2.19
PRPF40A-208ENST00000472760 PLB1Q6P1J6 1458 aa1.37□□□□□ -2.19
PRPF40A-208ENST00000472760 IGKV2D-26A0A0A0MRZ7 120 aa1.37□□□□□ -2.19
PRPF40A-208ENST00000472760 FAM236DA0A1B0GTK5 79 aa1.37□□□□□ -2.19
PRPF40A-208ENST00000472760 BUB1B-PAK6H3BSN5 160 aa1.37□□□□□ -2.19
PRPF40A-208ENST00000472760 CTSDP07339 412 aaPredicted RBP1.37□□□□□ -2.19
PRPF40A-208ENST00000472760 FAM236CP0DP71 79 aa1.37□□□□□ -2.19
PRPF40A-208ENST00000472760 MYL6P60660 151 aa1.37□□□□□ -2.19
PRPF40A-208ENST00000472760 SPANXN5Q5MJ07 72 aa1.37□□□□□ -2.19
PRPF40A-208ENST00000472760 HIST3H2BBQ8N257 126 aa1.37□□□□□ -2.19
PRPF40A-208ENST00000472760 SIGLECL1Q8N7X8 197 aa1.37□□□□□ -2.19
PRPF40A-208ENST00000472760 MNS1Q8NEH6 495 aa1.37□□□□□ -2.19
PRPF40A-208ENST00000472760 FADS1O60427 444 aa1.36□□□□□ -2.19
PRPF40A-208ENST00000472760 CNIH1O95406 144 aa1.36□□□□□ -2.19
PRPF40A-208ENST00000472760 TCL1BO95988 128 aa1.36□□□□□ -2.19
PRPF40A-208ENST00000472760 RBP1P09455 135 aa1.36□□□□□ -2.19
PRPF40A-208ENST00000472760 SMIM10L2AP0DMW4 78 aa1.36□□□□□ -2.19
PRPF40A-208ENST00000472760 SMIM10L2BP0DMW5 78 aa1.36□□□□□ -2.19
PRPF40A-208ENST00000472760 COX6A1P12074 109 aa1.36□□□□□ -2.19
PRPF40A-208ENST00000472760 RNASE3P12724 160 aaKnown RBP1.36□□□□□ -2.19
PRPF40A-208ENST00000472760 S100A4P26447 101 aaKnown RBP1.36□□□□□ -2.19
PRPF40A-208ENST00000472760 BRS3P32247 399 aa1.36□□□□□ -2.19
PRPF40A-208ENST00000472760 CDC42P60953 191 aa1.36□□□□□ -2.19
PRPF40A-208ENST00000472760 RHEBQ15382 184 aa1.36□□□□□ -2.19
PRPF40A-208ENST00000472760 OR4C6Q8NH72 309 aa1.36□□□□□ -2.19
PRPF40A-208ENST00000472760 BORCS7Q96B45 105 aa1.36□□□□□ -2.19
PRPF40A-208ENST00000472760 HELZ2Q9BYK8 2649 aaKnown RBP1.36□□□□□ -2.19
PRPF40A-208ENST00000472760 KRTAP4-1Q9BYQ7 146 aa1.36□□□□□ -2.19
PRPF40A-208ENST00000472760 C20orf27Q9GZN8 174 aa1.36□□□□□ -2.19
PRPF40A-208ENST00000472760 MYH11P35749 1972 aa1.36□□□□□ -2.19
PRPF40A-208ENST00000472760 TCRBP04435 133 aa1.35□□□□□ -2.19
PRPF40A-208ENST00000472760 ASAH2BP0C7U1 165 aa1.35□□□□□ -2.19
PRPF40A-208ENST00000472760 CDKN2CP42773 168 aa1.35□□□□□ -2.19
PRPF40A-208ENST00000472760 LSM6P62312 80 aaKnown RBP1.35□□□□□ -2.19
PRPF40A-208ENST00000472760 RANP62826 216 aaKnown RBP1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms