RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 GNG2P59768 71 aa6.7□□□□□ -1.34
VCL-204ENST00000472585 ARL6IP1Q15041 203 aa6.7□□□□□ -1.34
VCL-204ENST00000472585 C1orf134Q5TEV5 83 aa6.7□□□□□ -1.34
VCL-204ENST00000472585 TOMM20LQ6UXN7 152 aa6.7□□□□□ -1.34
VCL-204ENST00000472585 TRPT1Q86TN4 253 aaKnown RBP6.7□□□□□ -1.34
VCL-204ENST00000472585 HOGA1Q86XE5 327 aa6.7□□□□□ -1.34
VCL-204ENST00000472585 ZBTB34Q8NCN2 500 aa6.7□□□□□ -1.34
VCL-204ENST00000472585 DMBX1Q8NFW5 382 aa6.7□□□□□ -1.34
VCL-204ENST00000472585 OR1L8Q8NGR8 309 aa6.7□□□□□ -1.34
VCL-204ENST00000472585 FCAMRQ8WWV6 532 aa6.7□□□□□ -1.34
VCL-204ENST00000472585 SLC25A46Q96AG3 418 aa6.7□□□□□ -1.34
VCL-204ENST00000472585 SLC25A38Q96DW6 304 aa6.7□□□□□ -1.34
VCL-204ENST00000472585 AIFM2Q9BRQ8 373 aa6.7□□□□□ -1.34
VCL-204ENST00000472585 NXF2Q9GZY0 626 aaKnown RBP6.7□□□□□ -1.34
VCL-204ENST00000472585 NDUFB11Q9NX14 153 aa6.7□□□□□ -1.34
VCL-204ENST00000472585 OR51B2Q9Y5P1 312 aa6.7□□□□□ -1.34
VCL-204ENST00000472585 TRAV18A0A075B6X5 111 aa6.69□□□□□ -1.34
VCL-204ENST00000472585 DEFB131BA0A096LNP1 70 aa6.69□□□□□ -1.34
VCL-204ENST00000472585 A0A1B0GU03 582 aa6.69□□□□□ -1.34
VCL-204ENST00000472585 MARCH11A6NNE9 402 aa6.69□□□□□ -1.34
VCL-204ENST00000472585 KNCNA6PVL3 124 aa6.69□□□□□ -1.34
VCL-204ENST00000472585 NOTOA8MTQ0 251 aa6.69□□□□□ -1.34
VCL-204ENST00000472585 PGLYRP1O75594 196 aaPredicted RBP6.69□□□□□ -1.34
VCL-204ENST00000472585 YIF1AO95070 293 aa6.69□□□□□ -1.34
VCL-204ENST00000472585 KRASP01116 189 aa6.69□□□□□ -1.34
VCL-204ENST00000472585 AMBPP02760 352 aa6.69□□□□□ -1.34
VCL-204ENST00000472585 CLEC2LP0C7M8 214 aa6.69□□□□□ -1.34
VCL-204ENST00000472585 G6PCP35575 357 aa6.69□□□□□ -1.34
VCL-204ENST00000472585 RANBP1P43487 201 aa6.69□□□□□ -1.34
VCL-204ENST00000472585 Q6ZR54 194 aa6.69□□□□□ -1.34
VCL-204ENST00000472585 TMEM17Q86X19 198 aa6.69□□□□□ -1.34
VCL-204ENST00000472585 LGALS14Q8TCE9 139 aa6.69□□□□□ -1.34
VCL-204ENST00000472585 LSM10Q969L4 123 aaKnown RBP6.69□□□□□ -1.34
VCL-204ENST00000472585 CLEC5AQ9NY25 188 aa6.69□□□□□ -1.34
VCL-204ENST00000472585 DAPK2Q9UIK4 370 aa6.69□□□□□ -1.34
VCL-204ENST00000472585 MEIS3P1A6NDR6 274 aa6.68□□□□□ -1.34
VCL-204ENST00000472585 MT-CO2P00403 227 aa6.68□□□□□ -1.34
VCL-204ENST00000472585 IGKV1-39P01597 117 aa6.68□□□□□ -1.34
VCL-204ENST00000472585 IGKV1D-39P04432 117 aa6.68□□□□□ -1.34
VCL-204ENST00000472585 RLN1P04808 185 aa6.68□□□□□ -1.34
VCL-204ENST00000472585 MIFP14174 115 aa6.68□□□□□ -1.34
VCL-204ENST00000472585 MYL9P24844 172 aa6.68□□□□□ -1.34
VCL-204ENST00000472585 ARPC4P59998 168 aa6.68□□□□□ -1.34
VCL-204ENST00000472585 TBCEQ15813 527 aaPredicted RBP6.68□□□□□ -1.34
VCL-204ENST00000472585 AADACL3Q5VUY0 350 aa6.68□□□□□ -1.34
VCL-204ENST00000472585 THOC7Q6I9Y2 204 aaKnown RBP6.68□□□□□ -1.34
VCL-204ENST00000472585 HSD17B13Q7Z5P4 300 aaPredicted RBP6.68□□□□□ -1.34
VCL-204ENST00000472585 CADM3Q8N126 398 aa6.68□□□□□ -1.34
VCL-204ENST00000472585 OR1P1Q8NH06 330 aa6.68□□□□□ -1.34
VCL-204ENST00000472585 RNF167Q9H6Y7 350 aa6.68□□□□□ -1.34
VCL-204ENST00000472585 TMEM14BQ9NUH8 114 aa6.68□□□□□ -1.34
VCL-204ENST00000472585 TXNL4BQ9NX01 149 aaKnown RBP6.68□□□□□ -1.34
VCL-204ENST00000472585 RHBDL2Q9NX52 303 aa6.68□□□□□ -1.34
VCL-204ENST00000472585 COMMD9Q9P000 198 aa6.68□□□□□ -1.34
VCL-204ENST00000472585 SRRM2Q9UQ35 2752 aaKnown RBP6.67□□□□□ -1.34
VCL-204ENST00000472585 ANKRD65E5RJM6 399 aa6.67□□□□□ -1.34
VCL-204ENST00000472585 K7EQG2 157 aa6.67□□□□□ -1.34
VCL-204ENST00000472585 F2RP25116 425 aa6.67□□□□□ -1.34
VCL-204ENST00000472585 RFX2P48378 723 aa6.67□□□□□ -1.34
VCL-204ENST00000472585 MFAP4P55083 255 aa6.67□□□□□ -1.34
VCL-204ENST00000472585 RELQ04864 619 aaPredicted RBP6.67□□□□□ -1.34
VCL-204ENST00000472585 CATR1Q13166 79 aa6.67□□□□□ -1.34
VCL-204ENST00000472585 MLANAQ16655 118 aa6.67□□□□□ -1.34
VCL-204ENST00000472585 DHRS11Q6UWP2 260 aa6.67□□□□□ -1.34
VCL-204ENST00000472585 Q6ZRM9 215 aa6.67□□□□□ -1.34
VCL-204ENST00000472585 ZNF367Q7RTV3 350 aa6.67□□□□□ -1.34
VCL-204ENST00000472585 MISP3Q96FF7 219 aa6.67□□□□□ -1.34
VCL-204ENST00000472585 CMTM3Q96MX0 182 aa6.67□□□□□ -1.34
VCL-204ENST00000472585 AUNIPQ9H7T9 357 aa6.67□□□□□ -1.34
VCL-204ENST00000472585 MRPL36Q9P0J6 103 aaKnown RBP6.67□□□□□ -1.34
VCL-204ENST00000472585 RRP15Q9Y3B9 282 aaKnown RBP6.67□□□□□ -1.34
VCL-204ENST00000472585 APOBP04114 4563 aaKnown RBP6.66□□□□□ -1.34
VCL-204ENST00000472585 DNASE2O00115 360 aaPredicted RBP6.66□□□□□ -1.34
VCL-204ENST00000472585 EBAG9O00559 213 aa6.66□□□□□ -1.34
VCL-204ENST00000472585 ST8SIA3O43173 380 aa6.66□□□□□ -1.34
VCL-204ENST00000472585 TMEM50AO95807 157 aa6.66□□□□□ -1.34
VCL-204ENST00000472585 NPY1RP25929 384 aa6.66□□□□□ -1.34
VCL-204ENST00000472585 FGF9P31371 208 aaPredicted RBP6.66□□□□□ -1.34
VCL-204ENST00000472585 PPP5CP53041 499 aa6.66□□□□□ -1.34
VCL-204ENST00000472585 PAFAH1B2P68402 229 aa6.66□□□□□ -1.34
VCL-204ENST00000472585 IZUMO4Q1ZYL8 232 aa6.66□□□□□ -1.34
VCL-204ENST00000472585 UBE2UQ5VVX9 321 aa6.66□□□□□ -1.34
VCL-204ENST00000472585 SFXN4Q6P4A7 337 aa6.66□□□□□ -1.34
VCL-204ENST00000472585 STHQ8IWL8 128 aa6.66□□□□□ -1.34
VCL-204ENST00000472585 DUSP18Q8NEJ0 188 aa6.66□□□□□ -1.34
VCL-204ENST00000472585 OR5AP2Q8NGF4 316 aa6.66□□□□□ -1.34
VCL-204ENST00000472585 DCANP1Q8TF63 244 aa6.66□□□□□ -1.34
VCL-204ENST00000472585 SEC22AQ96IW7 307 aa6.66□□□□□ -1.34
VCL-204ENST00000472585 TXN2Q99757 166 aa6.66□□□□□ -1.34
VCL-204ENST00000472585 PUS1Q9Y606 427 aaKnown RBP eCLIP6.66□□□□□ -1.34
VCL-204ENST00000472585 TRAV2A0A0B4J234 112 aa6.65□□□□□ -1.34
VCL-204ENST00000472585 CYB5BO43169 146 aa6.65□□□□□ -1.34
VCL-204ENST00000472585 CD74P04233 296 aa6.65□□□□□ -1.34
VCL-204ENST00000472585 SDC2P34741 201 aa6.65□□□□□ -1.34
VCL-204ENST00000472585 TMEM41BQ5BJD5 291 aa6.65□□□□□ -1.34
VCL-204ENST00000472585 SPINK9Q5DT21 86 aa6.65□□□□□ -1.34
VCL-204ENST00000472585 ZNF114Q8NC26 417 aa6.65□□□□□ -1.34
VCL-204ENST00000472585 PINX1Q96BK5 328 aaKnown RBP6.65□□□□□ -1.34
VCL-204ENST00000472585 MOB3AQ96BX8 217 aa6.65□□□□□ -1.34
VCL-204ENST00000472585 FXYD6Q9H0Q3 95 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms