RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 SCGB1D2O95969 90 aa7.64□□□□□ -1.19
SF3A1-207ENST00000471342 IGHV3-48P01763 117 aa7.64□□□□□ -1.19
SF3A1-207ENST00000471342 RPLP1P05386 114 aaKnown RBP7.64□□□□□ -1.19
SF3A1-207ENST00000471342 NPY1RP25929 384 aa7.64□□□□□ -1.19
SF3A1-207ENST00000471342 ADMP35318 185 aa7.64□□□□□ -1.19
SF3A1-207ENST00000471342 RAB9AP51151 201 aa7.64□□□□□ -1.19
SF3A1-207ENST00000471342 EWSR1Q01844 656 aaKnown RBP eCLIP7.64□□□□□ -1.19
SF3A1-207ENST00000471342 TMEM182Q6ZP80 229 aaPredicted RBP7.64□□□□□ -1.19
SF3A1-207ENST00000471342 HSD17B13Q7Z5P4 300 aaPredicted RBP7.64□□□□□ -1.19
SF3A1-207ENST00000471342 C9orf62Q8N4C0 152 aa7.64□□□□□ -1.19
SF3A1-207ENST00000471342 KLHDC1Q8N7A1 406 aa7.64□□□□□ -1.19
SF3A1-207ENST00000471342 OR2T6Q8NHC8 308 aa7.64□□□□□ -1.19
SF3A1-207ENST00000471342 SPATA3Q8NHX4 192 aa7.64□□□□□ -1.19
SF3A1-207ENST00000471342 SCARB1Q8WTV0 552 aa7.64□□□□□ -1.19
SF3A1-207ENST00000471342 MDFIQ99750 246 aa7.64□□□□□ -1.19
SF3A1-207ENST00000471342 HINT2Q9BX68 163 aa7.64□□□□□ -1.19
SF3A1-207ENST00000471342 GNB4Q9HAV0 340 aa7.64□□□□□ -1.19
SF3A1-207ENST00000471342 PSENENQ9NZ42 101 aa7.64□□□□□ -1.19
SF3A1-207ENST00000471342 LSM4Q9Y4Z0 139 aaKnown RBP7.64□□□□□ -1.19
SF3A1-207ENST00000471342 RFNGQ9Y644 331 aa7.64□□□□□ -1.19
SF3A1-207ENST00000471342 DNAH3Q8TD57 4116 aa7.64□□□□□ -1.19
SF3A1-207ENST00000471342 E5RGE8 158 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 H3BUA1 57 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 BOLA2-SMG1P6H3BVE0 249 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 MT-CO2P00403 227 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 IGKV1-17P01599 117 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 METTL15P1P0C7V9 234 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 FCGR2BP31994 310 aaPredicted RBP7.63□□□□□ -1.19
SF3A1-207ENST00000471342 HTR2BP41595 481 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 HOXA1P49639 335 aaPredicted RBP7.63□□□□□ -1.19
SF3A1-207ENST00000471342 S100A10P60903 97 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 CD69Q07108 199 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 TMEM267Q0VDI3 215 aaPredicted RBP7.63□□□□□ -1.19
SF3A1-207ENST00000471342 FOXE3Q13461 319 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 GAMTQ14353 236 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 AWAT1Q58HT5 328 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 SPANXN5Q5MJ07 72 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 ZNF343Q6P1L6 599 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 AKAP14Q86UN6 197 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 ZNF502Q8TBZ5 544 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 WFDC12Q8WWY7 111 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 MS4A10Q96PG2 267 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 PDCD10Q9BUL8 212 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 ARV1Q9H2C2 271 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 HEYLQ9NQ87 328 aaPredicted RBP7.63□□□□□ -1.19
SF3A1-207ENST00000471342 CACFD1Q9UGQ2 172 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 S4R3C0 116 aa7.63□□□□□ -1.19
SF3A1-207ENST00000471342 IGHV3-21A0A0B4J1V1 117 aa7.62□□□□□ -1.19
SF3A1-207ENST00000471342 PSMB11A5LHX3 300 aa7.62□□□□□ -1.19
SF3A1-207ENST00000471342 MED6O75586 246 aa7.62□□□□□ -1.19
SF3A1-207ENST00000471342 OR2J3O76001 311 aa7.62□□□□□ -1.19
SF3A1-207ENST00000471342 CST7O76096 145 aa7.62□□□□□ -1.19
SF3A1-207ENST00000471342 ELANEP08246 267 aa7.62□□□□□ -1.19
SF3A1-207ENST00000471342 CTSGP08311 255 aa7.62□□□□□ -1.19
SF3A1-207ENST00000471342 RPL12P30050 165 aaKnown RBP7.62□□□□□ -1.19
SF3A1-207ENST00000471342 NKX2-5P52952 324 aaPredicted RBP7.62□□□□□ -1.19
SF3A1-207ENST00000471342 ATP5IP56385 69 aaPredicted RBP7.62□□□□□ -1.19
SF3A1-207ENST00000471342 RHOGP84095 191 aa7.62□□□□□ -1.19
SF3A1-207ENST00000471342 NOXA1Q86UR1 476 aa7.62□□□□□ -1.19
SF3A1-207ENST00000471342 KCNRGQ8N5I3 272 aa7.62□□□□□ -1.19
SF3A1-207ENST00000471342 STPG3Q8N7X2 389 aa7.62□□□□□ -1.19
SF3A1-207ENST00000471342 THAP8Q8NA92 274 aa7.62□□□□□ -1.19
SF3A1-207ENST00000471342 TMEM116Q8NCL8 245 aa7.62□□□□□ -1.19
SF3A1-207ENST00000471342 OR5AU1Q8NGC0 362 aa7.62□□□□□ -1.19
SF3A1-207ENST00000471342 CIB3Q96Q77 187 aaPredicted RBP7.62□□□□□ -1.19
SF3A1-207ENST00000471342 CITED1Q99966 193 aa7.62□□□□□ -1.19
SF3A1-207ENST00000471342 RNF114Q9Y508 228 aa7.62□□□□□ -1.19
SF3A1-207ENST00000471342 HSPB11Q9Y547 144 aa7.62□□□□□ -1.19
SF3A1-207ENST00000471342 ACTL6BO94805 426 aa7.61□□□□□ -1.19
SF3A1-207ENST00000471342 IGLC1P0CG04 106 aa7.61□□□□□ -1.19
SF3A1-207ENST00000471342 GPX4P36969 197 aaPredicted RBP7.61□□□□□ -1.19
SF3A1-207ENST00000471342 SULT1A1P50225 295 aa7.61□□□□□ -1.19
SF3A1-207ENST00000471342 ERHP84090 104 aaKnown RBP7.61□□□□□ -1.19
SF3A1-207ENST00000471342 ZNF546Q86UE3 836 aa7.61□□□□□ -1.19
SF3A1-207ENST00000471342 NECAP1Q8NC96 275 aa7.61□□□□□ -1.19
SF3A1-207ENST00000471342 RNASEH2CQ8TDP1 164 aaKnown RBP7.61□□□□□ -1.19
SF3A1-207ENST00000471342 CITED2Q99967 270 aaPredicted RBP7.61□□□□□ -1.19
SF3A1-207ENST00000471342 CHRDL1Q9BU40 450 aa7.61□□□□□ -1.19
SF3A1-207ENST00000471342 C19orf24Q9BVV8 132 aa7.61□□□□□ -1.19
SF3A1-207ENST00000471342 FBXL7Q9UJT9 491 aa7.61□□□□□ -1.19
SF3A1-207ENST00000471342 WDR83OSQ9Y284 106 aa7.61□□□□□ -1.19
SF3A1-207ENST00000471342 STRAPQ9Y3F4 350 aaKnown RBP7.61□□□□□ -1.19
SF3A1-207ENST00000471342 COL6A5A8TX70 2615 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.6□□□□□ -1.19
SF3A1-207ENST00000471342 FNDC10F2Z333 226 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 LY86O95711 162 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 IFNA10P01566 189 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 IGHV3-23P01764 117 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 LINC00869P0C866 280 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 DLK1P80370 383 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 RUNX1Q01196 453 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 FHL3Q13643 280 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 C15orf32Q32M92 178 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 SLC25A24Q6NUK1 477 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 TREML4Q6UXN2 200 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 ACOT7LQ6ZUV0 252 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 CENPVQ7Z7K6 275 aaPredicted RBP7.6□□□□□ -1.19
SF3A1-207ENST00000471342 OR4F5Q8NH21 305 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 OR4X1Q8NH49 305 aa7.6□□□□□ -1.19
SF3A1-207ENST00000471342 VN1R17PQ8TDU5 208 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms