RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 NPBQ8NG41 125 aa13.96□□□□□ -0.17
HSPG2-208ENST00000471322 OR10W1Q8NGF6 305 aa13.96□□□□□ -0.17
HSPG2-208ENST00000471322 OR2T10Q8NGZ9 312 aa13.96□□□□□ -0.17
HSPG2-208ENST00000471322 NANPQ8TBE9 248 aa13.96□□□□□ -0.17
HSPG2-208ENST00000471322 SFT2D1Q8WV19 159 aa13.96□□□□□ -0.17
HSPG2-208ENST00000471322 CACNG8Q8WXS5 425 aa13.96□□□□□ -0.17
HSPG2-208ENST00000471322 SMDT1Q9H4I9 107 aa13.96□□□□□ -0.17
HSPG2-208ENST00000471322 CD5P06127 495 aa13.95□□□□□ -0.18
HSPG2-208ENST00000471322 GPX4P36969 197 aaPredicted RBP13.95□□□□□ -0.18
HSPG2-208ENST00000471322 COMPP49747 757 aaPredicted RBP13.95□□□□□ -0.18
HSPG2-208ENST00000471322 SSX2Q16385 188 aa13.95□□□□□ -0.18
HSPG2-208ENST00000471322 MRGPRG-AS1Q2M3A8 158 aa13.95□□□□□ -0.18
HSPG2-208ENST00000471322 KLF17Q5JT82 389 aaPredicted RBP13.95□□□□□ -0.18
HSPG2-208ENST00000471322 RNASEH2CQ8TDP1 164 aaKnown RBP13.95□□□□□ -0.18
HSPG2-208ENST00000471322 MBD3L1Q8WWY6 194 aa13.95□□□□□ -0.18
HSPG2-208ENST00000471322 TPSG1Q9NRR2 321 aa13.95□□□□□ -0.18
HSPG2-208ENST00000471322 KIAA1456Q9P272 454 aa13.95□□□□□ -0.18
HSPG2-208ENST00000471322 TRAV40A0A0B4J280 105 aa13.94□□□□□ -0.18
HSPG2-208ENST00000471322 A0A1W2PRD5 423 aa13.94□□□□□ -0.18
HSPG2-208ENST00000471322 A0A1W2PRF3 423 aa13.94□□□□□ -0.18
HSPG2-208ENST00000471322 A0A1W2PRM7 423 aa13.94□□□□□ -0.18
HSPG2-208ENST00000471322 IGKV1D-33P01593 117 aa13.94□□□□□ -0.18
HSPG2-208ENST00000471322 IGKV1-33P01594 117 aa13.94□□□□□ -0.18
HSPG2-208ENST00000471322 SNRNP70P08621 437 aaKnown RBP13.94□□□□□ -0.18
HSPG2-208ENST00000471322 IGHV4-38-2P0DP08 117 aa13.94□□□□□ -0.18
HSPG2-208ENST00000471322 OPRK1P41145 380 aa13.94□□□□□ -0.18
HSPG2-208ENST00000471322 PLGLAQ15195 96 aa13.94□□□□□ -0.18
HSPG2-208ENST00000471322 GUK1Q16774 197 aa13.94□□□□□ -0.18
HSPG2-208ENST00000471322 TEPPQ6URK8 271 aa13.94□□□□□ -0.18
HSPG2-208ENST00000471322 SRSF8Q9BRL6 282 aaKnown RBP13.94□□□□□ -0.18
HSPG2-208ENST00000471322 SOX21Q9Y651 276 aaPredicted RBP13.94□□□□□ -0.18
HSPG2-208ENST00000471322 CGB1A6NKQ9 187 aa13.93□□□□□ -0.18
HSPG2-208ENST00000471322 NBR2O15453 112 aa13.93□□□□□ -0.18
HSPG2-208ENST00000471322 OR13C7P0DN81 318 aa13.93□□□□□ -0.18
HSPG2-208ENST00000471322 CNTFRP26992 372 aa13.93□□□□□ -0.18
HSPG2-208ENST00000471322 ELLP55199 621 aaPredicted RBP13.93□□□□□ -0.18
HSPG2-208ENST00000471322 WT1-ASQ06250 92 aa13.93□□□□□ -0.18
HSPG2-208ENST00000471322 TNXAQ16473 311 aa13.93□□□□□ -0.18
HSPG2-208ENST00000471322 ACOT6Q3I5F7 207 aaPredicted RBP13.93□□□□□ -0.18
HSPG2-208ENST00000471322 FFAR4Q5NUL3 377 aa13.93□□□□□ -0.18
HSPG2-208ENST00000471322 SPSB3Q6PJ21 355 aa13.93□□□□□ -0.18
HSPG2-208ENST00000471322 EAF1Q96JC9 268 aaPredicted RBP13.93□□□□□ -0.18
HSPG2-208ENST00000471322 FBXL15Q9H469 300 aa13.93□□□□□ -0.18
HSPG2-208ENST00000471322 LSM4Q9Y4Z0 139 aaKnown RBP13.93□□□□□ -0.18
HSPG2-208ENST00000471322 E7EUB6 86 aa13.93□□□□□ -0.18
HSPG2-208ENST00000471322 TSPAN9O75954 239 aa13.93□□□□□ -0.18
HSPG2-208ENST00000471322 NDUFA3O95167 84 aa13.93□□□□□ -0.18
HSPG2-208ENST00000471322 EBI3Q14213 229 aa13.93□□□□□ -0.18
HSPG2-208ENST00000471322 MMDQ15546 238 aa13.93□□□□□ -0.18
HSPG2-208ENST00000471322 ARSJQ5FYB0 599 aaPredicted RBP13.93□□□□□ -0.18
HSPG2-208ENST00000471322 C10orf55Q5SWW7 151 aa13.93□□□□□ -0.18
HSPG2-208ENST00000471322 EIF5A2Q9GZV4 153 aaKnown RBP13.93□□□□□ -0.18
HSPG2-208ENST00000471322 CYB5BO43169 146 aa13.92□□□□□ -0.18
HSPG2-208ENST00000471322 FAM106CPP0CH98 169 aa13.92□□□□□ -0.18
HSPG2-208ENST00000471322 M6PRP20645 277 aa13.92□□□□□ -0.18
HSPG2-208ENST00000471322 BRS3P32247 399 aa13.92□□□□□ -0.18
HSPG2-208ENST00000471322 SRSF3P84103 164 aaKnown RBP13.92□□□□□ -0.18
HSPG2-208ENST00000471322 AKR1C1Q04828 323 aa13.92□□□□□ -0.18
HSPG2-208ENST00000471322 CD69Q07108 199 aa13.92□□□□□ -0.18
HSPG2-208ENST00000471322 HES1Q14469 280 aa13.92□□□□□ -0.18
HSPG2-208ENST00000471322 ACSM6Q6P461 480 aa13.92□□□□□ -0.18
HSPG2-208ENST00000471322 BRD3OSQ6XYD6 125 aa13.92□□□□□ -0.18
HSPG2-208ENST00000471322 TMEM144Q7Z5S9 345 aa13.92□□□□□ -0.18
HSPG2-208ENST00000471322 BCL6BQ8N143 479 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-208ENST00000471322 ZNF114Q8NC26 417 aa13.92□□□□□ -0.18
HSPG2-208ENST00000471322 OR10G4Q8NGN3 311 aa13.92□□□□□ -0.18
HSPG2-208ENST00000471322 OR10G9Q8NGN4 311 aa13.92□□□□□ -0.18
HSPG2-208ENST00000471322 OR10G7Q8NGN6 311 aa13.92□□□□□ -0.18
HSPG2-208ENST00000471322 RCC1LQ96I51 464 aaKnown RBP13.92□□□□□ -0.18
HSPG2-208ENST00000471322 ACTR3CQ9C0K3 210 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-208ENST00000471322 VSIRQ9H7M9 311 aa13.92□□□□□ -0.18
HSPG2-208ENST00000471322 SLC39A9Q9NUM3 307 aa13.92□□□□□ -0.18
HSPG2-208ENST00000471322 TET2Q6N021 2002 aaPredicted RBP13.91□□□□□ -0.18
HSPG2-208ENST00000471322 FSHBP01225 129 aa13.91□□□□□ -0.18
HSPG2-208ENST00000471322 P2RX4Q99571 388 aa13.91□□□□□ -0.18
HSPG2-208ENST00000471322 SEC11CQ9BY50 192 aa13.91□□□□□ -0.18
HSPG2-208ENST00000471322 FAM96BQ9Y3D0 163 aa13.91□□□□□ -0.18
HSPG2-208ENST00000471322 TNCP24821 2201 aa13.91□□□□□ -0.18
HSPG2-208ENST00000471322 IGLC7A0M8Q6 106 aa13.9□□□□□ -0.18
HSPG2-208ENST00000471322 NPFFO15130 113 aa13.9□□□□□ -0.18
HSPG2-208ENST00000471322 GNB1P62873 340 aa13.9□□□□□ -0.18
HSPG2-208ENST00000471322 HNF4GQ14541 408 aa13.9□□□□□ -0.18
HSPG2-208ENST00000471322 RUSC1-AS1Q66K80 236 aa13.9□□□□□ -0.18
HSPG2-208ENST00000471322 ETFRF1Q6IPR1 90 aa13.9□□□□□ -0.18
HSPG2-208ENST00000471322 RPP25LQ8N5L8 163 aaKnown RBP13.9□□□□□ -0.18
HSPG2-208ENST00000471322 SLC35E1Q96K37 410 aa13.9□□□□□ -0.18
HSPG2-208ENST00000471322 MGST2Q99735 147 aa13.9□□□□□ -0.18
HSPG2-208ENST00000471322 GGTLC1Q9BX51 225 aa13.9□□□□□ -0.18
HSPG2-208ENST00000471322 TMEM231Q9H6L2 316 aa13.9□□□□□ -0.18
HSPG2-208ENST00000471322 C1RLQ9NZP8 487 aa13.9□□□□□ -0.18
HSPG2-208ENST00000471322 COL6A5A8TX70 2615 aa13.9□□□□□ -0.18
HSPG2-208ENST00000471322 CTXND1A0A1B0GTU2 59 aa13.9□□□□□ -0.19
HSPG2-208ENST00000471322 RBFOX3A6NFN3 312 aa13.9□□□□□ -0.19
HSPG2-208ENST00000471322 F8W036 122 aa13.9□□□□□ -0.19
HSPG2-208ENST00000471322 CORTO00230 105 aa13.9□□□□□ -0.19
HSPG2-208ENST00000471322 CNIH1O95406 144 aa13.9□□□□□ -0.19
HSPG2-208ENST00000471322 APOC3P02656 99 aa13.9□□□□□ -0.19
HSPG2-208ENST00000471322 SAA4P35542 130 aa13.9□□□□□ -0.19
HSPG2-208ENST00000471322 RPL29P47914 159 aaKnown RBP13.9□□□□□ -0.19
HSPG2-208ENST00000471322 CCL20P78556 96 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms