RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 DLX4Q92988 240 aaPredicted RBP5.81□□□□□ -1.48
BRCA1-210ENST00000471181 GP6Q9HCN6 339 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 DPM3Q9P2X0 92 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 NMBP08949 121 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 APOBEC3AP31941 199 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-210ENST00000471181 C1orf159Q96HA4 380 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 FER1L6Q2WGJ9 1857 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 TCRBV5S1A1TA0A578 114 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 SOCS3O14543 225 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 EREGO14944 169 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 C8orf82Q6P1X6 216 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-210ENST00000471181 CACNG8Q8WXS5 425 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 PLEKHB2Q96CS7 222 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 MSGN1A6NI15 193 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 FAM201AQ5SY85 155 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 PILRBQ9UKJ0 227 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 DTX4Q9Y2E6 619 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 MYH2Q9UKX2 1941 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 MYH15Q9Y2K3 1946 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 CDKN1AP38936 164 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 ATP1A1-AS1Q5TC04 95 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 DTX1Q86Y01 620 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 IFI27L1Q96BM0 104 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 DDX60LQ5H9U9 1706 aaKnown RBP5.8□□□□□ -1.48
BRCA1-210ENST00000471181 FOCADQ5VW36 1801 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 A0A1W2PRS3 328 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 ZNF561-AS1K7EIQ3 104 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 MMP23AO75900 390 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 IMMP1LQ96LU5 166 aa5.8□□□□□ -1.48
BRCA1-210ENST00000471181 BAZ2AQ9UIF9 1905 aaKnown RBP5.79□□□□□ -1.48
BRCA1-210ENST00000471181 A0A1W2PPI3 338 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 A0A1W2PQF6 199 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 CD24P25063 80 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 PTGDSP41222 190 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 RPL36AP83881 106 aaKnown RBP5.79□□□□□ -1.48
BRCA1-210ENST00000471181 ISXQ2M1V0 245 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 RPL36ALQ969Q0 106 aaKnown RBP5.79□□□□□ -1.48
BRCA1-210ENST00000471181 CD5P06127 495 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 INAFM2P0DMQ5 153 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 HMGA2P52926 109 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 CRYGNQ8WXF5 182 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 C22orf46C9J442 243 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 SIGLEC15Q6ZMC9 328 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 POC1AQ8NBT0 407 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 R3HDMLQ9H3Y0 253 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 FAM90A10PA6NDY2 464 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 FAM90A18PA6NE21 464 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 FAM90A16PA6NEW6 464 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 FAM90A20PA6NIJ5 464 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 FAM90A8PA6NJQ4 464 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 FAM90A7PA6NKC0 464 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 FAM90A22PA8MWA6 464 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 FAM90A12PA8MX19 464 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 FAM90A5PA8MXJ8 464 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 FAM90A23PA8MXZ1 464 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 C9JAW5 83 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 FAM90A15PP0C7V4 464 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 FAM90A13PP0C7W8 464 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 FAM90A14PP0C7W9 464 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 FAM90A24PP0C7X0 464 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 RBM3P98179 157 aaKnown RBP5.79□□□□□ -1.48
BRCA1-210ENST00000471181 BCL6BQ8N143 479 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-210ENST00000471181 AQP3Q92482 292 aa5.79□□□□□ -1.48
BRCA1-210ENST00000471181 RCC1LQ96I51 464 aaKnown RBP5.79□□□□□ -1.48
BRCA1-210ENST00000471181 ZXDCQ2QGD7 858 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-210ENST00000471181 TMEM30BQ3MIR4 351 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 TPTE2P1Q5T6R2 138 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 UBE2E2Q96LR5 201 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 C5orf66Q9H5L9 145 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 CROCCQ5TZA2 2017 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 FAM90A9PA6NNJ1 464 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 TAL2Q16559 108 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 C1QL2Q7Z5L3 287 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 CRIM1Q9NZV1 1036 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 LINC00527Q9UJ94 153 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 IGLV3-25P01717 112 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 ACTL10Q5JWF8 245 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 FAM216BQ8N7L0 139 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 ZIC4Q8N9L1 334 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 SRXN1Q9BYN0 137 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 NEUROG3Q9Y4Z2 214 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 IGKV2-40A0A087WW87 121 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-210ENST00000471181 IGKV1D-16P01601 117 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 IGKV2D-40P01614 121 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-210ENST00000471181 RHOGP84095 191 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 PMVKQ15126 192 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 PRIMA1Q86XR5 153 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 PSG8Q9UQ74 426 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 MYMXA0A1B0GTQ4 84 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 GAGE12JA6NER3 117 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 FSTP19883 344 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 ZP1P60852 638 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 GAGE1Q13065 139 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 GAGE4Q13068 117 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 GAGE5Q13069 117 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 GAGE6Q13070 117 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 RASL11AQ6T310 242 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 SLC25A38Q96DW6 304 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 SPXQ9BT56 116 aa5.78□□□□□ -1.48
BRCA1-210ENST00000471181 CHAC1Q9BUX1 264 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms