RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 BORCS7-ASMTA0A0B4J1R7 106 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 TRAV3A0A0B4J244 114 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 TEX50A0A1B0GTY4 177 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 RNF222A6NCQ9 220 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 BCL2L11O43521 198 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 IFNA10P01566 189 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 HLA-DRB1P01911 266 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 HKR1P10072 659 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 SRP14P37108 136 aaKnown RBP5.27□□□□□ -1.57
VAMP3-202ENST00000470357 SNCAP37840 140 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 SULT1A1P50225 295 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 NKX2-5P52952 324 aaPredicted RBP5.27□□□□□ -1.57
VAMP3-202ENST00000470357 EWSR1Q01844 656 aaKnown RBP eCLIP5.27□□□□□ -1.57
VAMP3-202ENST00000470357 HNF4GQ14541 408 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 ZNF266Q14584 549 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 TNXAQ16473 311 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 ATP6V1FQ16864 119 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 LGALSLQ3ZCW2 172 aaPredicted RBP5.27□□□□□ -1.57
VAMP3-202ENST00000470357 SPANXN5Q5MJ07 72 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 ZNF562Q6V9R5 426 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 RBMS3Q6XE24 437 aaKnown RBP5.27□□□□□ -1.57
VAMP3-202ENST00000470357 TMUB2Q71RG4 321 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 SLC51BQ86UW2 128 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 STPG2Q8N412 459 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 TMEM252Q8N6L7 170 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 OR1S2Q8NGQ3 325 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 OR1L6Q8NGR2 347 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 C17orf50Q8WW18 174 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 SSMEM1Q8WWF3 244 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 PINX1Q96BK5 328 aaKnown RBP5.27□□□□□ -1.57
VAMP3-202ENST00000470357 TMEM68Q96MH6 324 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 RBM14Q96PK6 669 aaKnown RBP5.27□□□□□ -1.57
VAMP3-202ENST00000470357 SLC25A33Q9BSK2 321 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 GGACTQ9BVM4 153 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 HINT2Q9BX68 163 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 FBXL15Q9H469 300 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 PRDM13Q9H4Q3 707 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 C11orf1Q9H5F2 150 aa5.27□□□□□ -1.57
VAMP3-202ENST00000470357 PRKDCP78527 4128 aaKnown RBP5.26□□□□□ -1.57
VAMP3-202ENST00000470357 H3BUX3 64 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 CORTO00230 105 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 JTBO76095 146 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 NXPH3O95157 252 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 OR8U8P0C7N1 319 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 IAPPP10997 89 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 CXCL2P19875 107 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 NPY1RP25929 384 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 VDAC2P45880 294 aaPredicted RBP5.26□□□□□ -1.57
VAMP3-202ENST00000470357 PAX9P55771 341 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 UBA52P62987 128 aaKnown RBP5.26□□□□□ -1.57
VAMP3-202ENST00000470357 OPCMLQ14982 345 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 FAM120AOSQ5T036 256 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 LAMTOR1Q6IAA8 161 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 EIF5AL1Q6IS14 154 aaKnown RBP5.26□□□□□ -1.57
VAMP3-202ENST00000470357 TMEM14EPQ6UXP3 125 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 TMEM86BQ8N661 226 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 SLC24A4Q8NFF2 622 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 OR10P1Q8NGE3 313 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 SRSF12Q8WXF0 261 aaKnown RBP5.26□□□□□ -1.57
VAMP3-202ENST00000470357 RITA1Q96K30 269 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 WWC2-AS2Q96NR7 200 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 SLA2Q9H6Q3 261 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 ZMAT4Q9H898 229 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 PLSCR3Q9NRY6 295 aa5.26□□□□□ -1.57
VAMP3-202ENST00000470357 IGSF23A1L1A6 192 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 A6NDX4 124 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 FAM24AA6NFZ4 105 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 MSGN1A6NI15 193 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 FNDC10F2Z333 226 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 H3BP45 60 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 SOX15O60248 233 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 TMEM50AO95807 157 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 CA2P00918 260 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 IFNA7P01567 189 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 IFNA5P01569 189 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 IFNA4P05014 189 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 OR13C7P0DN81 318 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 TPT1P13693 172 aaKnown RBP5.25□□□□□ -1.57
VAMP3-202ENST00000470357 CD24P25063 80 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 CNTFRP26992 372 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 IER3P46695 156 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 GNB1P62873 340 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 CX3CL1P78423 397 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 TMEM267Q0VDI3 215 aaPredicted RBP5.25□□□□□ -1.57
VAMP3-202ENST00000470357 EXOSC2Q13868 293 aaKnown RBP5.25□□□□□ -1.57
VAMP3-202ENST00000470357 FXYD3Q14802 87 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 DEFB112Q30KQ8 113 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 C2orf83Q53S99 150 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 ETFRF1Q6IPR1 90 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 Q6YL49 198 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 C5orf56Q8N8D9 126 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 Q8N9W7 124 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 ZNF114Q8NC26 417 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 STOML3Q8TAV4 291 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 RNASEH2CQ8TDP1 164 aaKnown RBP5.25□□□□□ -1.57
VAMP3-202ENST00000470357 ABHD5Q8WTS1 349 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 ARPC1AQ92747 370 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 PHYHIPLQ96FC7 376 aa5.25□□□□□ -1.57
VAMP3-202ENST00000470357 ZNF471Q9BX82 626 aaPredicted RBP5.25□□□□□ -1.57
VAMP3-202ENST00000470357 KRTAP3-1Q9BYR8 98 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms