RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 EXTL2Q9UBQ6 330 aa23.22■■□□□ 1.31
HMG20B-209ENST00000470356 SPRY2O43597 315 aa23.21■■□□□ 1.31
HMG20B-209ENST00000470356 P0C879 139 aa23.21■■□□□ 1.31
HMG20B-209ENST00000470356 C15orf40Q8WUR7 153 aa23.21■■□□□ 1.31
HMG20B-209ENST00000470356 TP53RKQ96S44 253 aa23.21■■□□□ 1.31
HMG20B-209ENST00000470356 IGHV3-48P01763 117 aa23.2■■□□□ 1.3
HMG20B-209ENST00000470356 SMIM18P0DKX4 95 aa23.2■■□□□ 1.3
HMG20B-209ENST00000470356 BMI1P35226 326 aa23.2■■□□□ 1.3
HMG20B-209ENST00000470356 PINX1Q96BK5 328 aaKnown RBP23.2■■□□□ 1.3
HMG20B-209ENST00000470356 TRAV14DV4A0A0A6YYC5 116 aa23.19■■□□□ 1.3
HMG20B-209ENST00000470356 A0A0B4J293 547 aa23.19■■□□□ 1.3
HMG20B-209ENST00000470356 INS-IGF2F8WCM5 200 aa23.19■■□□□ 1.3
HMG20B-209ENST00000470356 GNG7O60262 68 aa23.19■■□□□ 1.3
HMG20B-209ENST00000470356 ATG12O94817 140 aa23.19■■□□□ 1.3
HMG20B-209ENST00000470356 STPG3Q8N7X2 389 aa23.19■■□□□ 1.3
HMG20B-209ENST00000470356 TERB2Q8NHR7 220 aa23.19■■□□□ 1.3
HMG20B-209ENST00000470356 GALNT14Q96FL9 552 aa23.19■■□□□ 1.3
HMG20B-209ENST00000470356 C3orf85A0A1B0GTC6 90 aa23.18■■□□□ 1.3
HMG20B-209ENST00000470356 SNCAP37840 140 aa23.18■■□□□ 1.3
HMG20B-209ENST00000470356 AKR1C2P52895 323 aa23.18■■□□□ 1.3
HMG20B-209ENST00000470356 DEFB135Q30KP9 77 aa23.18■■□□□ 1.3
HMG20B-209ENST00000470356 SPINK9Q5DT21 86 aa23.18■■□□□ 1.3
HMG20B-209ENST00000470356 ZFAND1Q8TCF1 268 aa23.18■■□□□ 1.3
HMG20B-209ENST00000470356 IGHV3-49A0A0A0MS15 119 aa23.17■■□□□ 1.3
HMG20B-209ENST00000470356 CD74P04233 296 aa23.17■■□□□ 1.3
HMG20B-209ENST00000470356 CMC4P56277 68 aaPredicted RBP23.17■■□□□ 1.3
HMG20B-209ENST00000470356 TNFRSF9Q07011 255 aa23.17■■□□□ 1.3
HMG20B-209ENST00000470356 GPR107Q5VW38 600 aa23.17■■□□□ 1.3
HMG20B-209ENST00000470356 TMEM229BQ8NBD8 167 aa23.17■■□□□ 1.3
HMG20B-209ENST00000470356 COPZ2Q9P299 210 aa23.17■■□□□ 1.3
HMG20B-209ENST00000470356 A0A0J9YWU9 116 aa23.16■■□□□ 1.3
HMG20B-209ENST00000470356 ST8SIA3O43173 380 aa23.16■■□□□ 1.3
HMG20B-209ENST00000470356 NPBWR1P48145 328 aa23.16■■□□□ 1.3
HMG20B-209ENST00000470356 PPP5CP53041 499 aa23.16■■□□□ 1.3
HMG20B-209ENST00000470356 SLC35G3Q8N808 338 aa23.16■■□□□ 1.3
HMG20B-209ENST00000470356 DUSP18Q8NEJ0 188 aa23.16■■□□□ 1.3
HMG20B-209ENST00000470356 OR4D10Q8NGI6 311 aa23.16■■□□□ 1.3
HMG20B-209ENST00000470356 RNF183Q96D59 192 aa23.16■■□□□ 1.3
HMG20B-209ENST00000470356 HYDINQ4G0P3 5121 aa23.15■■□□□ 1.3
HMG20B-209ENST00000470356 IFNA17P01571 189 aa23.15■■□□□ 1.3
HMG20B-209ENST00000470356 RPL35AP18077 110 aaKnown RBP23.15■■□□□ 1.3
HMG20B-209ENST00000470356 TAS2R19P59542 299 aa23.15■■□□□ 1.3
HMG20B-209ENST00000470356 FAM90A2PQ658T7 463 aa23.15■■□□□ 1.3
HMG20B-209ENST00000470356 PVRIGQ6DKI7 326 aa23.15■■□□□ 1.3
HMG20B-209ENST00000470356 LYG2Q86SG7 212 aa23.15■■□□□ 1.3
HMG20B-209ENST00000470356 CCDC71LQ8N9Z2 235 aa23.15■■□□□ 1.3
HMG20B-209ENST00000470356 MAP6D1Q9H9H5 199 aa23.15■■□□□ 1.3
HMG20B-209ENST00000470356 PLECQ15149 4684 aaKnown RBP23.14■■□□□ 1.3
HMG20B-209ENST00000470356 TRIM16LQ309B1 348 aa23.14■■□□□ 1.29
HMG20B-209ENST00000470356 SP6Q3SY56 376 aa23.14■■□□□ 1.29
HMG20B-209ENST00000470356 TOMM20LQ6UXN7 152 aa23.14■■□□□ 1.29
HMG20B-209ENST00000470356 OR13C8Q8NGS7 320 aa23.14■■□□□ 1.29
HMG20B-209ENST00000470356 GINS3Q9BRX5 216 aa23.14■■□□□ 1.29
HMG20B-209ENST00000470356 C6orf62Q9GZU0 229 aaPredicted RBP23.14■■□□□ 1.29
HMG20B-209ENST00000470356 ALMS1Q8TCU4 4167 aa23.13■■□□□ 1.29
HMG20B-209ENST00000470356 RAB3DO95716 219 aa23.13■■□□□ 1.29
HMG20B-209ENST00000470356 CD5P06127 495 aa23.13■■□□□ 1.29
HMG20B-209ENST00000470356 UCP1P25874 307 aa23.13■■□□□ 1.29
HMG20B-209ENST00000470356 SUB1P53999 127 aaKnown RBP eCLIP23.13■■□□□ 1.29
HMG20B-209ENST00000470356 APRG1Q8IVJ8 170 aa23.13■■□□□ 1.29
HMG20B-209ENST00000470356 PDCD10Q9BUL8 212 aa23.13■■□□□ 1.29
HMG20B-209ENST00000470356 MIXL1Q9H2W2 232 aa23.13■■□□□ 1.29
HMG20B-209ENST00000470356 EPPK1P58107 5090 aaKnown RBP23.12■■□□□ 1.29
HMG20B-209ENST00000470356 IGHV3OR16-13A0A075B7E8 117 aa23.12■■□□□ 1.29
HMG20B-209ENST00000470356 IGHV3-74A0A0B4J1X5 117 aa23.12■■□□□ 1.29
HMG20B-209ENST00000470356 GABARAPH6UMI1 98 aa23.12■■□□□ 1.29
HMG20B-209ENST00000470356 B3GALNT1O75752 331 aa23.12■■□□□ 1.29
HMG20B-209ENST00000470356 ETV6P41212 452 aa23.12■■□□□ 1.29
HMG20B-209ENST00000470356 TFPI2P48307 235 aa23.12■■□□□ 1.29
HMG20B-209ENST00000470356 SSBP1Q04837 148 aaKnown RBP23.12■■□□□ 1.29
HMG20B-209ENST00000470356 SCGB2B2Q4G0G5 96 aa23.12■■□□□ 1.29
HMG20B-209ENST00000470356 STEAP1BQ6NZ63 245 aa23.12■■□□□ 1.29
HMG20B-209ENST00000470356 CORTO00230 105 aa23.11■■□□□ 1.29
HMG20B-209ENST00000470356 RNASE2P10153 161 aaKnown RBP23.11■■□□□ 1.29
HMG20B-209ENST00000470356 ATF4P18848 351 aaPredicted RBP23.11■■□□□ 1.29
HMG20B-209ENST00000470356 EWSR1Q01844 656 aaKnown RBP eCLIP23.11■■□□□ 1.29
HMG20B-209ENST00000470356 ZNF600Q6ZNG1 722 aa23.11■■□□□ 1.29
HMG20B-209ENST00000470356 MARCH1Q8TCQ1 289 aa23.11■■□□□ 1.29
HMG20B-209ENST00000470356 RRNAD1Q96FB5 475 aaKnown RBP23.11■■□□□ 1.29
HMG20B-209ENST00000470356 VSIRQ9H7M9 311 aa23.11■■□□□ 1.29
HMG20B-209ENST00000470356 IGKV3-7A0A075B6H7 116 aa23.1■■□□□ 1.29
HMG20B-209ENST00000470356 CXorf65A6NEN9 183 aa23.1■■□□□ 1.29
HMG20B-209ENST00000470356 TMEM50AO95807 157 aa23.1■■□□□ 1.29
HMG20B-209ENST00000470356 PAFAH1B2P68402 229 aa23.1■■□□□ 1.29
HMG20B-209ENST00000470356 MRPS10P82664 201 aaKnown RBP23.09■■□□□ 1.29
HMG20B-209ENST00000470356 ZNF124Q15973 351 aa23.09■■□□□ 1.29
HMG20B-209ENST00000470356 TCF24Q7RTU0 167 aa23.09■■□□□ 1.29
HMG20B-209ENST00000470356 GBGT1Q8N5D6 347 aa23.09■■□□□ 1.29
HMG20B-209ENST00000470356 ZFAND3Q9H8U3 227 aa23.09■■□□□ 1.29
HMG20B-209ENST00000470356 PUS1Q9Y606 427 aaKnown RBP eCLIP23.09■■□□□ 1.29
HMG20B-209ENST00000470356 A0A0G2JRQ6 117 aa23.08■■□□□ 1.29
HMG20B-209ENST00000470356 RGS5O15539 181 aa23.08■■□□□ 1.29
HMG20B-209ENST00000470356 HOXA1P49639 335 aaPredicted RBP23.08■■□□□ 1.29
HMG20B-209ENST00000470356 PMS2P11Q13670 270 aa23.08■■□□□ 1.29
HMG20B-209ENST00000470356 MEF2DQ14814 521 aa23.08■■□□□ 1.29
HMG20B-209ENST00000470356 ST8SIA2Q92186 375 aa23.08■■□□□ 1.29
HMG20B-209ENST00000470356 MRPS26Q9BYN8 205 aaKnown RBP23.08■■□□□ 1.29
HMG20B-209ENST00000470356 TMEM222Q9H0R3 208 aa23.08■■□□□ 1.29
HMG20B-209ENST00000470356 CSTL1Q9H114 145 aa23.08■■□□□ 1.29
HMG20B-209ENST00000470356 ENY2Q9NPA8 101 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms