RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 TPRA1Q86W33 373 aa13.61□□□□□ -0.23
NCKIPSD-209ENST00000470006 OR1P1Q8NH06 330 aa13.61□□□□□ -0.23
NCKIPSD-209ENST00000470006 PINX1Q96BK5 328 aaKnown RBP13.61□□□□□ -0.23
NCKIPSD-209ENST00000470006 COMMD9Q9P000 198 aa13.61□□□□□ -0.23
NCKIPSD-209ENST00000470006 TRAV1-2A0A0B4J238 106 aa13.6□□□□□ -0.23
NCKIPSD-209ENST00000470006 SSX5O60225 188 aa13.6□□□□□ -0.23
NCKIPSD-209ENST00000470006 MT-CO2P00403 227 aa13.6□□□□□ -0.23
NCKIPSD-209ENST00000470006 KRASP01116 189 aa13.6□□□□□ -0.23
NCKIPSD-209ENST00000470006 CD74P04233 296 aa13.6□□□□□ -0.23
NCKIPSD-209ENST00000470006 ZNF818PQ6ZRF7 136 aa13.6□□□□□ -0.23
NCKIPSD-209ENST00000470006 TMEM17Q86X19 198 aa13.6□□□□□ -0.23
NCKIPSD-209ENST00000470006 TSPAN14Q8NG11 270 aa13.6□□□□□ -0.23
NCKIPSD-209ENST00000470006 MOB3AQ96BX8 217 aa13.6□□□□□ -0.23
NCKIPSD-209ENST00000470006 SCRT2Q9NQ03 307 aa13.6□□□□□ -0.23
NCKIPSD-209ENST00000470006 SMIM30A4D0T7 59 aa13.59□□□□□ -0.23
NCKIPSD-209ENST00000470006 I3L2K1 104 aa13.59□□□□□ -0.23
NCKIPSD-209ENST00000470006 EMP1P54849 157 aa13.59□□□□□ -0.23
NCKIPSD-209ENST00000470006 CSNK1G2-AS1Q8NCQ2 148 aa13.59□□□□□ -0.23
NCKIPSD-209ENST00000470006 BEST4Q8NFU0 473 aa13.59□□□□□ -0.23
NCKIPSD-209ENST00000470006 MGLLQ99685 303 aa13.59□□□□□ -0.23
NCKIPSD-209ENST00000470006 HERC1Q15751 4861 aa13.58□□□□□ -0.23
NCKIPSD-209ENST00000470006 FCER2P06734 321 aa13.58□□□□□ -0.24
NCKIPSD-209ENST00000470006 G6PCP35575 357 aa13.58□□□□□ -0.24
NCKIPSD-209ENST00000470006 Q8N1X5 172 aa13.58□□□□□ -0.24
NCKIPSD-209ENST00000470006 FKBP11Q9NYL4 201 aa13.58□□□□□ -0.24
NCKIPSD-209ENST00000470006 PRNDQ9UKY0 176 aa13.58□□□□□ -0.24
NCKIPSD-209ENST00000470006 PUS1Q9Y606 427 aaKnown RBP eCLIP13.58□□□□□ -0.24
NCKIPSD-209ENST00000470006 A0A1W2PS18 150 aa13.57□□□□□ -0.24
NCKIPSD-209ENST00000470006 K7EQG2 157 aa13.57□□□□□ -0.24
NCKIPSD-209ENST00000470006 SPART-AS1P0CW21 52 aa13.57□□□□□ -0.24
NCKIPSD-209ENST00000470006 NPPCP23582 126 aa13.57□□□□□ -0.24
NCKIPSD-209ENST00000470006 LPAR6P43657 344 aa13.57□□□□□ -0.24
NCKIPSD-209ENST00000470006 TNP2Q05952 138 aa13.57□□□□□ -0.24
NCKIPSD-209ENST00000470006 RNF212Q495C1 297 aa13.57□□□□□ -0.24
NCKIPSD-209ENST00000470006 GRAMD2BQ96HH9 432 aa13.57□□□□□ -0.24
NCKIPSD-209ENST00000470006 TPRKBQ9Y3C4 175 aa13.57□□□□□ -0.24
NCKIPSD-209ENST00000470006 RGS10O43665 173 aa13.56□□□□□ -0.24
NCKIPSD-209ENST00000470006 SCGNO76038 276 aa13.56□□□□□ -0.24
NCKIPSD-209ENST00000470006 HTN3P15516 51 aa13.56□□□□□ -0.24
NCKIPSD-209ENST00000470006 ZNF600Q6ZNG1 722 aa13.56□□□□□ -0.24
NCKIPSD-209ENST00000470006 C1QTNF4Q9BXJ3 329 aa13.56□□□□□ -0.24
NCKIPSD-209ENST00000470006 XCL2Q9UBD3 114 aa13.56□□□□□ -0.24
NCKIPSD-209ENST00000470006 RLN1P04808 185 aa13.55□□□□□ -0.24
NCKIPSD-209ENST00000470006 F2RP25116 425 aa13.55□□□□□ -0.24
NCKIPSD-209ENST00000470006 NPBWR1P48145 328 aa13.55□□□□□ -0.24
NCKIPSD-209ENST00000470006 HERV-K104P61576 105 aa13.55□□□□□ -0.24
NCKIPSD-209ENST00000470006 NUTF2P61970 127 aaKnown RBP13.55□□□□□ -0.24
NCKIPSD-209ENST00000470006 FCAMRQ8WWV6 532 aa13.55□□□□□ -0.24
NCKIPSD-209ENST00000470006 FAM210BQ96KR6 192 aa13.55□□□□□ -0.24
NCKIPSD-209ENST00000470006 NACAE9PAV3 2078 aa13.54□□□□□ -0.24
NCKIPSD-209ENST00000470006 PSMG4Q5JS54 123 aa13.54□□□□□ -0.24
NCKIPSD-209ENST00000470006 BORCS5Q969J3 196 aa13.54□□□□□ -0.24
NCKIPSD-209ENST00000470006 NARS2Q96I59 477 aaKnown RBP13.54□□□□□ -0.24
NCKIPSD-209ENST00000470006 METTL26Q96S19 204 aa13.54□□□□□ -0.24
NCKIPSD-209ENST00000470006 RAB40CQ96S21 281 aa13.54□□□□□ -0.24
NCKIPSD-209ENST00000470006 ZFAND3Q9H8U3 227 aa13.54□□□□□ -0.24
NCKIPSD-209ENST00000470006 TMED3Q9Y3Q3 217 aa13.54□□□□□ -0.24
NCKIPSD-209ENST00000470006 DBX1A6NMT0 343 aa13.53□□□□□ -0.24
NCKIPSD-209ENST00000470006 P2RY1P47900 373 aa13.53□□□□□ -0.24
NCKIPSD-209ENST00000470006 HOGA1Q86XE5 327 aa13.53□□□□□ -0.24
NCKIPSD-209ENST00000470006 RNF167Q9H6Y7 350 aa13.53□□□□□ -0.24
NCKIPSD-209ENST00000470006 LRP1BQ9NZR2 4599 aa13.53□□□□□ -0.24
NCKIPSD-209ENST00000470006 GNRHRP30968 328 aa13.52□□□□□ -0.25
NCKIPSD-209ENST00000470006 ERHP84090 104 aaKnown RBP13.52□□□□□ -0.25
NCKIPSD-209ENST00000470006 DHRS2Q13268 280 aa13.52□□□□□ -0.25
NCKIPSD-209ENST00000470006 C22orf42Q6IC83 251 aa13.52□□□□□ -0.25
NCKIPSD-209ENST00000470006 OR4A16Q8NH70 328 aa13.52□□□□□ -0.25
NCKIPSD-209ENST00000470006 TSC22D3Q99576 134 aa13.52□□□□□ -0.25
NCKIPSD-209ENST00000470006 VCXQ9H320 206 aa13.52□□□□□ -0.25
NCKIPSD-209ENST00000470006 TRAV18A0A075B6X5 111 aa13.51□□□□□ -0.25
NCKIPSD-209ENST00000470006 IGHV3OR16-12A0A075B7B8 117 aa13.51□□□□□ -0.25
NCKIPSD-209ENST00000470006 A0A1B0GU03 582 aa13.51□□□□□ -0.25
NCKIPSD-209ENST00000470006 TMEM189A5PLL7 270 aa13.51□□□□□ -0.25
NCKIPSD-209ENST00000470006 HELTA6NFD8 242 aa13.51□□□□□ -0.25
NCKIPSD-209ENST00000470006 PGLYRP1O75594 196 aaPredicted RBP13.51□□□□□ -0.25
NCKIPSD-209ENST00000470006 EIF2B2P49770 351 aaKnown RBP13.51□□□□□ -0.25
NCKIPSD-209ENST00000470006 ZNF367Q7RTV3 350 aa13.51□□□□□ -0.25
NCKIPSD-209ENST00000470006 DCANP1Q8TF63 244 aa13.51□□□□□ -0.25
NCKIPSD-209ENST00000470006 TMEM230Q96A57 120 aa13.51□□□□□ -0.25
NCKIPSD-209ENST00000470006 ATG101Q9BSB4 218 aa13.51□□□□□ -0.25
NCKIPSD-209ENST00000470006 DUSP21Q9H596 190 aa13.51□□□□□ -0.25
NCKIPSD-209ENST00000470006 DAPK2Q9UIK4 370 aa13.51□□□□□ -0.25
NCKIPSD-209ENST00000470006 PPP5CP53041 499 aa13.5□□□□□ -0.25
NCKIPSD-209ENST00000470006 NIPSNAP3BQ9BS92 247 aa13.5□□□□□ -0.25
NCKIPSD-209ENST00000470006 TRDV1A0A1B0GX56 115 aa13.49□□□□□ -0.25
NCKIPSD-209ENST00000470006 NOTOA8MTQ0 251 aa13.49□□□□□ -0.25
NCKIPSD-209ENST00000470006 TMEM50AO95807 157 aa13.49□□□□□ -0.25
NCKIPSD-209ENST00000470006 FGF9P31371 208 aaPredicted RBP13.49□□□□□ -0.25
NCKIPSD-209ENST00000470006 CMTM1Q8IZ96 169 aa13.49□□□□□ -0.25
NCKIPSD-209ENST00000470006 ZNF114Q8NC26 417 aa13.49□□□□□ -0.25
NCKIPSD-209ENST00000470006 OR5AP2Q8NGF4 316 aa13.49□□□□□ -0.25
NCKIPSD-209ENST00000470006 LGALS14Q8TCE9 139 aa13.49□□□□□ -0.25
NCKIPSD-209ENST00000470006 RHBDL2Q9NX52 303 aa13.49□□□□□ -0.25
NCKIPSD-209ENST00000470006 APOBP04114 4563 aaKnown RBP13.48□□□□□ -0.25
NCKIPSD-209ENST00000470006 DMBT1Q9UGM3 2413 aaPredicted RBP13.48□□□□□ -0.25
NCKIPSD-209ENST00000470006 SNCAP37840 140 aa13.48□□□□□ -0.25
NCKIPSD-209ENST00000470006 KCTD21Q4G0X4 260 aa13.48□□□□□ -0.25
NCKIPSD-209ENST00000470006 OGFRL1Q5TC84 451 aaPredicted RBP13.48□□□□□ -0.25
NCKIPSD-209ENST00000470006 FAM222AQ5U5X8 452 aa13.48□□□□□ -0.25
NCKIPSD-209ENST00000470006 TMEM88Q6PEY1 159 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms